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Searched refs:new_sample_idx (Results 1 – 3 of 3) sorted by relevance

/dports/biology/plink/plink-ng-79b2df8c/2.0/include/
H A Dpgenlib_write.cc635 last_sample_idx = new_sample_idx; in SaveLdDifflist()
790 assert(new_sample_idx >= last_sample_idx + 1); in SaveOnebit()
795 last_sample_idx = new_sample_idx; in SaveOnebit()
992 uint32_t new_sample_idx; in SaveLdTwoListDelta() local
1005 new_sample_idx = next_difflist_sample_idx; in SaveLdTwoListDelta()
1009 if (next_ldbase_sample_idx == new_sample_idx) { in SaveLdTwoListDelta()
1017 new_sample_idx = next_ldbase_sample_idx; in SaveLdTwoListDelta()
1030 last_sample_idx = new_sample_idx; in SaveLdTwoListDelta()
1076 last_sample_idx = new_sample_idx; in SaveLdInputList()
1269 assert(new_sample_idx >= last_sample_idx + 1); in PwcAppendDeltalist()
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H A Dpgenlib_read.cc9615 uintptr_t new_sample_idx = SubU32Load(group_info_iter, sample_id_byte_ct); in ValidateAndCountDeltalist() local
9617 if (unlikely(sample_idx >= new_sample_idx)) { in ValidateAndCountDeltalist()
9626 sample_idx = new_sample_idx; in ValidateAndCountDeltalist()
/dports/biology/plink/plink-ng-79b2df8c/2.0/
H A Dplink2_data.cc1395 const uint32_t new_sample_widx = new_sample_idx / kBitsPerWord; in UnpackAndResortHphase()
1509 for (uint32_t new_sample_idx = 0; new_sample_idx != sample_ct; ++new_sample_idx) { in CopyAndResort8bit() local
1510 const uint32_t old_sample_idx = new_sample_idx_to_old[new_sample_idx]; in CopyAndResort8bit()
1512 SetBit(new_sample_idx, dst_subset); in CopyAndResort8bit()
1529 for (uint32_t new_sample_idx = 0; new_sample_idx != sample_ct; ++new_sample_idx) { in CopyAndResort16bit() local
1530 const uint32_t old_sample_idx = new_sample_idx_to_old[new_sample_idx]; in CopyAndResort16bit()
1532 SetBit(new_sample_idx, dst_subset); in CopyAndResort16bit()
5950 for (uint32_t new_sample_idx = 0; new_sample_idx != sample_ct; ++new_sample_idx) { variable
5951 ctx.old_sample_idx_to_new[new_sample_idx_to_old[new_sample_idx]] = new_sample_idx;
7044 for (uint32_t new_sample_idx = 0; new_sample_idx != sample_ct; ++new_sample_idx) { variable
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