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Searched refs:newaa (Results 1 – 2 of 2) sorted by relevance

/dports/biology/emboss/EMBOSS-6.6.0/ajax/core/
H A Dajtranslate.c2297 char newaa[] = "X"; in trnComplete() local
2358 newaa[0] = 'X'; in trnComplete()
2362 while(newaa[0]) in trnComplete()
2364 newaa[0] = '\0'; in trnComplete()
2382 if(!newaa[0]) in trnComplete()
2386 newaa[0] = thys->GC[i][j][k]; in trnComplete()
2390 strcat(aalist, newaa); in trnComplete()
/dports/biology/paml/paml4.9j/src/
H A Dcodeml.c5013 char aa = 0, newaa = 0; in GetAASiteSpecies() local
5023 newaa = GeneticCode[com.icode][FROM61[CharaMap[c][k]]]; in GetAASiteSpecies()
5024 if (newaa == -1) continue; in GetAASiteSpecies()
5025 newaa = AAs[newaa]; in GetAASiteSpecies()
5028 aa = newaa; in GetAASiteSpecies()
5031 if (newaa != aa) naa++; in GetAASiteSpecies()