Searched refs:nniToDo (Results 1 – 1 of 1) sorted by relevance
| /dports/biology/fasttree/FastTree-2.1.10_5/ |
| H A D | FastTree-2.1.10.c | 2187 int nniToDo = nni == -1 ? (int)(0.5 + 4.0 * log(NJ->nSeq)/log(2)) : nni; in main() local
2193 if (spr > 0 || nniToDo > 0 || MLnniToDo > 0) in main()
2194 …ing topology: %d rounds ME-NNIs, %d rounds ME-SPRs, %d rounds ML-NNIs\n", nniToDo, spr, MLnniToDo); in main()
2197 if (nniToDo>0) { in main()
2201 for (i=0; i < nniToDo; i++) { in main()
2204 …int nChange = NNI(/*IN/OUT*/NJ, i, nniToDo, /*use ml*/false, /*IN/OUT*/nni_stats, /*OUT*/&maxDelta… in main()
2216 if (sprRemaining > 0 && (nniToDo/(spr+1) > 0 && ((i+1) % (nniToDo/(spr+1))) == 0)) { in main()
2457 if (nniToDo > 0 || spr > 0 || MLnniToDo > 0) in main()
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