| /dports/science/gabedit/GabeditSrc251_300720/src/MolecularMechanics/ |
| H A D | PDBTemplate.c | 45 for(j=0;j<pdbTemplate->residueTemplates[i].numberOfTypes;j++) in freePDBTpl()
131 gint numberOfTypes = staticPDBTemplate->residueTemplates[residueNumber].numberOfTypes; in getmmType() local
133 for(j=0;j<numberOfTypes;j++) in getmmType()
185 gint numberOfTypes = staticPDBTemplate->residueTemplates[residueNumber].numberOfTypes; in getHydrogens() local
187 for(j=0;j<numberOfTypes;j++) in getHydrogens()
191 for(k=j+1;k<numberOfTypes;k++) in getHydrogens()
273 gint numberOfTypes = 0; in getListPDBTypes() local
281 numberOfTypes = staticPDBTemplate->residueTemplates[residueNumber].numberOfTypes; in getListPDBTypes()
282 t = g_malloc(numberOfTypes*sizeof(gchar*)); in getListPDBTypes()
283 for(j=0;j<numberOfTypes;j++) in getListPDBTypes()
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| H A D | SetPDBTemplate.c | 305 gint numberOfTypes; in availableType() local
309 numberOfTypes = pdbTemplate->residueTemplates[residueNumber].numberOfTypes; in availableType()
323 gint numberOfTypes; in newType() local
371 numberOfTypes++; in newType()
380 pdbTemplate->residueTemplates[residueNumber].numberOfTypes = numberOfTypes; in newType()
404 gint numberOfTypes; in editnewDlg() local
422 numberOfTypes = pdbTemplate->residueTemplates[residueNumber].numberOfTypes; in editnewDlg()
533 gint numberOfTypes; in deleteOneResidue() local
623 gint numberOfTypes; in deleteOneType() local
655 numberOfTypes--; in deleteOneType()
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| H A D | SavePDBTemplate.c | 50 gint numberOfTypes = pdbTemplate->residueTemplates[residueNumber].numberOfTypes; in saveOneResidue() local
54 for(i=0;i<numberOfTypes;i++) in saveOneResidue()
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| H A D | LoadPDBTemplate.c | 91 pdbTemplate->residueTemplates[i].numberOfTypes = 0; in setResiduesList()
147 pdbTemplate->residueTemplates[residueNumber].numberOfTypes = 0; in setOneResidue()
153 pdbTemplate->residueTemplates[residueNumber].numberOfTypes = n; in setOneResidue()
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| H A D | PDBTemplate.h | 20 gint numberOfTypes; member
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| H A D | MolecularMechanics.h | 102 gint numberOfTypes; member
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| H A D | MolecularMechanics.c | 54 amberParameters.numberOfTypes = 0; in newAmberParameters()
87 for(i=0;i<amberParameters->numberOfTypes;i++) in freeAmberParameters()
91 for(i=0;i<amberParameters->numberOfTypes;i++) in freeAmberParameters()
95 amberParameters->numberOfTypes = 0; in freeAmberParameters()
147 gint nTypes = amberParameters->numberOfTypes; in getNumberType()
1277 if(staticAmberParameters && staticAmberParameters->numberOfTypes >0 ) in setAmberParameters()
1355 if(staticAmberParameters && staticAmberParameters->numberOfTypes >0 ) in setAllPairWiseParameters()
2715 if(!staticAmberParameters || staticAmberParameters->numberOfTypes<=0) in getListMMTypes()
2718 t = g_malloc(staticAmberParameters->numberOfTypes*sizeof(gchar*)); in getListMMTypes()
2719 *nlist = staticAmberParameters->numberOfTypes; in getListMMTypes()
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| H A D | SetMMParameters.c | 302 *nlist = amberParameters->numberOfTypes; in getLocalListTypes()
304 for(i=0;i<amberParameters->numberOfTypes;i++) in getLocalListTypes()
370 gint nTypes = amberParameters->numberOfTypes; in getNumberType()
388 gint nTypes = amberParameters->numberOfTypes; in getType()
709 for(i=0;i<amberParameters->numberOfTypes;i++) in rafreshListTypes()
2256 for(j=0;j<amberParameters->numberOfTypes;j++) in newType()
2270 amberParameters->numberOfTypes ++; in newType()
2271 if(amberParameters->numberOfTypes>1) in newType()
2278 i = amberParameters->numberOfTypes -1; in newType()
3373 amberParameters->numberOfTypes--; in deleteType()
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| H A D | CreatePersonalMMFile.c | 196 for(i=0;i<amberParameters->numberOfTypes;i++) in saveParametersAtomTypes()
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| H A D | LoadMMParameters.c | 144 amberParameters->numberOfTypes = n; in readAmberTypes()
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| /dports/biology/protomol/protomol/framework/forces/ |
| H A D | PaulTrapExtendedForce.h | 239 const unsigned int numberOfTypes = topo->atomTypes.size(); in initialize() local
243 for(unsigned int i=0;i<numberOfTypes;i++){ in initialize()
249 if(pos != numberOfTypes && neg != numberOfTypes) in initialize()
253 myOmegaR.resize(numberOfTypes); in initialize()
254 myOmegaZ.resize(numberOfTypes); in initialize()
255 for(unsigned int i=0;i<numberOfTypes;i++){ in initialize()
269 std::vector<int> n(numberOfTypes,0); in initialize()
277 for(unsigned int i=0;i<numberOfTypes;i++){ in initialize()
283 for(unsigned int j=i+1;j<numberOfTypes;j++){ in initialize()
304 for(unsigned int i=0;i<numberOfTypes;i++){ in initialize()
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| /dports/graphics/blender/blender-2.91.0/doc/blender_file_format/ |
| H A D | BlendFileReader.py | 288 numberOfTypes = Read('uint', handle, fileheader)
289 log.debug("building #{0} types".format(numberOfTypes))
290 for i in range(numberOfTypes):
297 log.debug("building #{0} type-lengths".format(numberOfTypes))
298 for i in range(numberOfTypes):
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| /dports/audio/praat/praat-6.2.03/dwtools/ |
| H A D | HMM.cpp | 1633 const integer numberOfTypes = my classes->size; in StringsIndex_to_TableOfReal_transitions() local
1635 autoTableOfReal thee = TableOfReal_create (numberOfTypes + 1, numberOfTypes + 1); in StringsIndex_to_TableOfReal_transitions()
1636 for (integer i = 1; i <= numberOfTypes; i ++) { in StringsIndex_to_TableOfReal_transitions()
1646 for (integer i = 1; i <= numberOfTypes; i ++) { in StringsIndex_to_TableOfReal_transitions()
1649 thy data [i] [numberOfTypes + 1] = rowSum; in StringsIndex_to_TableOfReal_transitions()
1650 thy data [numberOfTypes + 1] [i] = colSum; in StringsIndex_to_TableOfReal_transitions()
1653 thy data [numberOfTypes + 1] [numberOfTypes + 1] = sum; in StringsIndex_to_TableOfReal_transitions()
1655 for (integer i = 1; i <= numberOfTypes; i ++) in StringsIndex_to_TableOfReal_transitions()
1656 if (thy data [i] [numberOfTypes + 1] > 0.0) in StringsIndex_to_TableOfReal_transitions()
1660 thy data [i] [numberOfTypes + 1] /= sum; in StringsIndex_to_TableOfReal_transitions()
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| /dports/science/gabedit/GabeditSrc251_300720/utils/MolecularMechanics/ |
| H A D | createmmfile.c | 80 gint numberOfTypes; member
118 amberParameters.numberOfTypes = 0; in newAmberParameters()
148 for(i=0;i<amberParameters->numberOfTypes;i++) in freeAmberParameters()
152 amberParameters->numberOfTypes = 0; in freeAmberParameters()
204 gint nTypes = amberParameters->numberOfTypes; in getNumberType()
278 amberParameters->numberOfTypes = n; in readAmberTypes()
1286 for(i=0;i<amberParameters->numberOfTypes;i++) in printfMmCFileAtomTypes()
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| /dports/science/gabedit/GabeditSrc251_300720/src/Common/ |
| H A D | Global.h | 121 gint numberOfTypes; member
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| H A D | Preferences.c | 1710 for(i=0;i<batchCommands.numberOfTypes;i++) in modify_batch_command()
1766 for(i=0;i<batchCommands.numberOfTypes;i++) in modify_batch_entrys()
1830 combo = create_combo_box_entry(batchCommands.types,batchCommands.numberOfTypes,TRUE,-1,-1); in create_batch_commands()
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| /dports/science/gabedit/GabeditSrc251_300720/src/Utils/ |
| H A D | Utils.c | 1103 fprintf(fd,"%d\n",batchCommands.numberOfTypes); in create_commands_file()
1104 for(i=0;i<batchCommands.numberOfTypes;i++) in create_commands_file()
1713 for(i=0;i<batchCommands.numberOfTypes;i++) in free_batch_commands()
1801 batchCommands.numberOfTypes = atoi(t); in read_commands_file()
1802 batchCommands.types = g_malloc(batchCommands.numberOfTypes*sizeof(gchar*)); in read_commands_file()
1805 batchCommands.jobIdTitle = g_malloc(batchCommands.numberOfTypes*sizeof(gchar*)); in read_commands_file()
1807 for(i=0;i<batchCommands.numberOfTypes;i++) in read_commands_file()
1814 for(i=0;i<batchCommands.numberOfTypes;i++) in read_commands_file()
2347 batchCommands.numberOfTypes = 4; in initialise_batch_commands()
2348 batchCommands.types = g_malloc(batchCommands.numberOfTypes*sizeof(gchar*)); in initialise_batch_commands()
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| /dports/converters/wkhtmltopdf/qt-5db36ec/src/3rdparty/webkit/Source/WebCore/ |
| H A D | ChangeLog-2010-12-06 | 51049 should not be used outside this class. Renamed numberOfTypes to
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