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Searched refs:old_penalty (Results 1 – 3 of 3) sorted by relevance

/dports/cad/graywolf/graywolf-0.1.6-4-gf47937b/src/twsc/
H A Dfeedest.c250 INT i , n , row , row_rite , excess_fd , *old_penalty ; in re_estimate_feed_penalty() local
255 old_penalty = (INT *)Ysafe_malloc( numChansG * sizeof(INT) ) ; in re_estimate_feed_penalty()
257 old_penalty[row] = rowfeed_penaltyG[row] ; in re_estimate_feed_penalty()
272 ( 2 * old_penalty[row] + 3 * rowfeed_penaltyG[row] ) / 5 ; in re_estimate_feed_penalty()
314 Ysafe_free( old_penalty ); in re_estimate_feed_penalty()
/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/app/pubseq_gateway/server/
H A Dosg_mapper.cpp422 _DEBUG_ARG(double old_penalty = penalty); in AcceptFeedback()
438 << " from " << old_penalty << " to " << penalty); in AcceptFeedback()
/dports/biology/fasttree/FastTree-2.1.10_5/
H A DFastTree-2.1.10.c4802 double old_penalty = ppart[ABvsCD]; in ChooseNNI() local
4804 if (new_penalty > old_penalty + 1e-6) in ChooseNNI()