| /dports/science/massxpert/massxpert-c229f4a1abde3c20b83a90e50f9c5d79104dfa5f/gui/ |
| H A D | mzLabInputOligomerTableView.cpp | 93 mp_oligomerList = oligomerList; in setOligomerList()
98 MzLabInputOligomerTableView::oligomerList() in oligomerList() function in massXpert::MzLabInputOligomerTableView
274 if (!oligomerList->size()) in pasteEvent()
276 delete oligomerList; in pasteEvent()
288 while(oligomerList->size()) in pasteEvent()
296 delete oligomerList; in pasteEvent()
341 if (!oligomerList->size()) in dropEvent()
345 delete oligomerList; in dropEvent()
358 while(oligomerList->size()) in dropEvent()
372 delete oligomerList; in dropEvent()
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| H A D | massSearchOligomerTableView.cpp | 108 mp_oligomerList = oligomerList; in setOligomerList()
113 MassSearchOligomerTableView::oligomerList() in oligomerList() function in massXpert::MassSearchOligomerTableView
137 if(!oligomerList) in selectedOligomers()
145 int oligomerCount = oligomerList->size(); in selectedOligomers()
153 localIndex = oligomerList->size(); in selectedOligomers()
216 oligomerList->insert(localIndex, newOligomer); in selectedOligomers()
237 OligomerList oligomerList; in selectedOligomersAsPlainText() local
240 int appendedOligomerCount = selectedOligomers(&oligomerList, -1); in selectedOligomersAsPlainText()
243 if(appendedOligomerCount != oligomerList.size()) in selectedOligomersAsPlainText()
265 while(!oligomerList.isEmpty()) in selectedOligomersAsPlainText()
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| H A D | cleaveOligomerTableView.cpp | 103 CleaveOligomerTableView::setOligomerList(OligomerList *oligomerList) in setOligomerList() argument
105 mp_oligomerList = oligomerList; in setOligomerList()
110 CleaveOligomerTableView::oligomerList() in oligomerList() function in massXpert::CleaveOligomerTableView
134 if(!oligomerList) in selectedOligomers()
142 int oligomerCount = oligomerList->size(); in selectedOligomers()
150 localIndex = oligomerList->size(); in selectedOligomers()
217 oligomerList->insert(localIndex, newOligomer); in selectedOligomers()
237 OligomerList oligomerList; in selectedOligomersAsPlainText() local
243 if(appendedOligomerCount != oligomerList.size()) in selectedOligomersAsPlainText()
259 while(!oligomerList.isEmpty()) in selectedOligomersAsPlainText()
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| H A D | fragmentOligomerTableView.cpp | 103 mp_oligomerList = oligomerList; in setOligomerList()
108 FragmentOligomerTableView::oligomerList() in oligomerList() function in massXpert::FragmentOligomerTableView
132 if(!oligomerList) in selectedOligomers()
140 int oligomerCount = oligomerList->size(); in selectedOligomers()
148 localIndex = oligomerList->size(); in selectedOligomers()
212 oligomerList->insert(localIndex, newOligomer); in selectedOligomers()
232 OligomerList oligomerList; in selectedOligomersAsPlainText() local
235 int appendedOligomerCount = selectedOligomers(&oligomerList, -1); in selectedOligomersAsPlainText()
238 if(appendedOligomerCount != oligomerList.size()) in selectedOligomersAsPlainText()
254 while(!oligomerList.isEmpty()) in selectedOligomersAsPlainText()
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| H A D | fragmentOligomerTableViewModel.cpp | 49 (OligomerList *oligomerList, QObject *parent) in FragmentOligomerTableViewModel() argument
52 if(!oligomerList) in FragmentOligomerTableViewModel()
55 mp_oligomerList = oligomerList; in FragmentOligomerTableViewModel()
74 FragmentOligomerTableViewModel::oligomerList() in oligomerList() function in massXpert::FragmentOligomerTableViewModel
247 FragmentOligomerTableViewModel::addOligomers(const OligomerList &oligomerList) in addOligomers() argument
265 int oligomersToAdd = oligomerList.size(); in addOligomers()
284 Oligomer *oligomer = oligomerList.at(iter); in addOligomers()
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| H A D | cleaveOligomerTableViewModel.cpp | 50 (OligomerList *oligomerList, QObject *parent) in CleaveOligomerTableViewModel() argument
53 if(!oligomerList) in CleaveOligomerTableViewModel()
56 mp_oligomerList = oligomerList; in CleaveOligomerTableViewModel()
75 CleaveOligomerTableViewModel::oligomerList() in oligomerList() function in massXpert::CleaveOligomerTableViewModel
258 CleaveOligomerTableViewModel::addOligomers(const OligomerList &oligomerList) in addOligomers() argument
276 int oligomersToAdd = oligomerList.size(); in addOligomers()
296 static_cast<CleaveOligomer *>(oligomerList.at(iter)); in addOligomers()
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| H A D | massSearchOligomerTableViewModel.cpp | 48 (OligomerList *oligomerList, QObject *parent) in MassSearchOligomerTableViewModel() argument
51 if(!oligomerList) in MassSearchOligomerTableViewModel()
54 mp_oligomerList = oligomerList; in MassSearchOligomerTableViewModel()
73 MassSearchOligomerTableViewModel::oligomerList() in oligomerList() function in massXpert::MassSearchOligomerTableViewModel
314 MassSearchOligomerTableViewModel::addOligomers(const OligomerList &oligomerList) in addOligomers() argument
332 int oligomersToAdd = oligomerList.size(); in addOligomers()
351 Oligomer *oligomer = oligomerList.at(iter); in addOligomers()
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| H A D | mzLabMatchBasedActionsDlg.cpp | 165 (const OligomerList &oligomerList, in fillMolecularMassList() argument
172 for (int iter = 0; iter < oligomerList.size(); ++iter) in fillMolecularMassList()
174 Oligomer *oligomer = oligomerList.at(iter); in fillMolecularMassList()
274 const OligomerList &listMz1 = dlg1->oligomerList(); in performMatchWorkPushButton()
281 const OligomerList &listMz2 = dlg2->oligomerList(); in performMatchWorkPushButton()
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| H A D | mzLabInputOligomerTableViewModel.cpp | 47 (OligomerList *oligomerList, QObject *parent) in MzLabInputOligomerTableViewModel() argument
50 if(!oligomerList) in MzLabInputOligomerTableViewModel()
53 mp_oligomerList = oligomerList; in MzLabInputOligomerTableViewModel()
72 MzLabInputOligomerTableViewModel::oligomerList() const in oligomerList() function in massXpert::MzLabInputOligomerTableViewModel
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| H A D | fragmentationDlg.cpp | 427 OligomerList oligomerList; in fragment() local
445 mpa_fragmenter->setOligomerList(&oligomerList); in fragment()
473 int initialOligomers = oligomerList.size(); in fragment()
483 mpa_oligomerTableViewModel->addOligomers(oligomerList); in fragment()
494 oligomerList.clear(); in fragment()
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| H A D | mzLabOutputOligomerTableView.cpp | 409 (OligomerList *oligomerList) in duplicateSelectedOligomers() argument
411 if(!oligomerList) in duplicateSelectedOligomers()
509 oligomerList->append(newOligomer); in duplicateSelectedOligomers()
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| H A D | cleaveOligomerTableView.hpp | 86 const OligomerList *oligomerList();
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| H A D | fragmentOligomerTableView.hpp | 86 const OligomerList *oligomerList();
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| H A D | massSearchOligomerTableView.hpp | 85 const OligomerList *oligomerList();
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| H A D | fragmentOligomerTableViewModel.hpp | 81 const OligomerList *oligomerList();
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| H A D | cleaveOligomerTableViewModel.hpp | 80 const OligomerList *oligomerList();
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| H A D | massSearchOligomerTableViewModel.hpp | 80 const OligomerList *oligomerList();
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| H A D | mzLabInputOligomerTableViewModel.hpp | 91 const OligomerList *oligomerList() const;
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| H A D | mzLabInputOligomerTableViewDlg.hpp | 104 const OligomerList &oligomerList();
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| H A D | mzLabInputOligomerTableView.hpp | 90 const OligomerList *oligomerList();
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| /dports/science/massxpert/massxpert-c229f4a1abde3c20b83a90e50f9c5d79104dfa5f/lib/ |
| H A D | cleaver.cpp | 80 Cleaver::setOligomerList(OligomerList *oligomerList) in setOligomerList() argument
82 Q_ASSERT(oligomerList); in setOligomerList()
84 mp_oligomerList = oligomerList; in setOligomerList()
89 Cleaver::oligomerList() in oligomerList() function in massXpert::Cleaver
780 Cleaver::analyzeCrossLinks(OligomerList *oligomerList) in analyzeCrossLinks() argument
782 Q_ASSERT(oligomerList); in analyzeCrossLinks()
825 oligomerList->removeAt(foundIndex); in analyzeCrossLinks()
856 oligomerList->append(oligomer); in analyzeCrossLinks()
864 return oligomerList->size(); in analyzeCrossLinks()
873 Q_ASSERT(oligomerList); in analyzeCrossLinkedOligomer()
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| H A D | fragmenter.cpp | 113 Fragmenter::setOligomerList(OligomerList *oligomerList) in setOligomerList() argument
115 Q_ASSERT(oligomerList); in setOligomerList()
117 mp_oligomerList = oligomerList; in setOligomerList()
122 Fragmenter::oligomerList() in oligomerList() function in massXpert::Fragmenter
1820 Q_ASSERT(oligomerList); in accountFormulas()
1867 oligomerList->append(newOligomer); in accountFormulas()
1880 Q_ASSERT(oligomerList); in accountIonizationLevels()
1907 while(!oligomerList->isEmpty()) in accountIonizationLevels()
2004 while(!oligomerList->isEmpty()) in accountIonizationLevels()
2005 delete oligomerList->takeFirst(); in accountIonizationLevels()
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| H A D | lib.pro | 44 oligomerList.hpp \
95 oligomerList.cpp \
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| H A D | cleaver.hpp | 80 OligomerList *oligomerList();
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| H A D | fragmenter.hpp | 82 OligomerList * oligomerList();
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