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Searched refs:only_specific (Results 1 – 4 of 4) sorted by relevance

/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/app/magicblast/
H A Dmagicblast_thread.cpp75 const bool only_specific = m_FormattingArgs->SelectOnlyStrandSpecific(); in Main() local
85 if (!only_specific && (fr || rf)) { in Main()
94 if (only_specific && !(fr || rf)) { in Main()
220 only_specific, in Main()
H A Dmagicblast_util.hpp64 bool only_specific,
H A Dmagicblast_app.cpp355 const bool only_specific = fmt_args->SelectOnlyStrandSpecific(); in Run() local
365 if (!only_specific && (fr || rf)) { in Run()
376 if (only_specific && !(fr || rf)) { in Run()
H A Dmagicblast_util.cpp918 bool only_specific, in PrintSAM() argument
949 trim_read_ids, strand_specific, only_specific, in PrintSAM()
956 trim_read_ids, strand_specific, only_specific, in PrintSAM()
1494 bool only_specific, in PrintSAM() argument
1514 strand_specific, only_specific, print_md_tag); in PrintSAM()
1555 bool only_specific, in PrintSAM() argument
1564 no_discordant, strand_specific, only_specific, print_md_tag); in PrintSAM()