optimizeWithEM (reference) in projects: dports

Searched refs:optimizeWithEM (Results 1 – 8 of 8) sorted by relevance

/dports/biology/iqtree/IQ-TREE-2.0.6/model/
H A D	rategammainvar.h	`124 double optimizeWithEM(); 193 double optimizeWithEM(double gradient_epsilon);`
H A D	rategammainvar.cpp	`153 return optimizeWithEM(gradient_epsilon); in optimizeParameters() 216 double RateGammaInvar::optimizeWithEM(double gradient_epsilon) { in optimizeWithEM() function in RateGammaInvar 257 return optimizeWithEM(gradient_epsilon); in randomRestartOptimization() 275 double logl = optimizeWithEM(gradient_epsilon); in randomRestartOptimization()`
H A D	rateheterotachy.cpp	`146 return optimizeWithEM(); in optimizeParameters() 149 double RateHeterotachy::optimizeWithEM() { in optimizeWithEM() function in RateHeterotachy`
H A D	ratefree.h	`79 double optimizeWithEM();`
H A D	rateheterotachy.h	`132 double optimizeWithEM();`
H A D	modelmixture.h	`186 double optimizeWithEM(double gradient_epsilon);`
H A D	ratefree.cpp	`247 return optimizeWithEM(); in optimizeParameters() 487 double RateFree::optimizeWithEM() { in optimizeWithEM() function in RateFree`
H A D	modelmixture.cpp	`1620 double ModelMixture::optimizeWithEM(double gradient_epsilon) { in optimizeWithEM() function in ModelMixture 1788 score = optimizeWithEM(gradient_epsilon); in optimizeParameters()`