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Searched refs:orig_loc (Results 1 – 25 of 145) sorted by relevance

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/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/objtools/variation/process/
H A Danalyze-shift.cpp140 if (orig_loc.IsInt()) in ProcessHGVS()
142 orig_left = orig_loc.GetInt().GetFrom(); in ProcessHGVS()
143 orig_right = orig_loc.GetInt().GetTo(); in ProcessHGVS()
145 else if (orig_loc.IsPnt()) in ProcessHGVS()
147 orig_left = orig_loc.GetPnt().GetPoint(); in ProcessHGVS()
153 if (type == CVariation_inst::eType_ins && orig_loc.IsInt()) in ProcessHGVS()
155 int pos = orig_loc.GetInt().GetTo(); in ProcessHGVS()
158 if (orig_loc.GetInt().IsSetStrand()) in ProcessHGVS()
159 pnt.SetStrand( orig_loc.GetInt().GetStrand() ); in ProcessHGVS()
160 pnt.SetId().Assign(orig_loc.GetInt().GetId()); in ProcessHGVS()
[all …]
/dports/lang/spidermonkey78/firefox-78.9.0/third_party/python/pyflakes/pyflakes/
H A Dmessages.py31 def __init__(self, filename, loc, name, orig_loc): argument
33 self.message_args = (name, orig_loc.lineno)
39 def __init__(self, filename, loc, name, orig_loc): argument
41 self.message_args = (name, orig_loc.lineno)
47 def __init__(self, filename, loc, name, orig_loc): argument
49 self.message_args = (name, orig_loc.lineno)
108 def __init__(self, filename, loc, name, orig_loc): argument
110 if orig_loc is None:
115 self.message_args = (name, orig_loc.lineno)
/dports/devel/py-pyflakes/pyflakes-2.4.0/pyflakes/
H A Dmessages.py31 def __init__(self, filename, loc, name, orig_loc): argument
33 self.message_args = (name, orig_loc.lineno)
39 def __init__(self, filename, loc, name, orig_loc): argument
41 self.message_args = (name, orig_loc.lineno)
47 def __init__(self, filename, loc, name, orig_loc): argument
49 self.message_args = (name, orig_loc.lineno)
108 def __init__(self, filename, loc, name, orig_loc): argument
110 if orig_loc is None:
115 self.message_args = (name, orig_loc.lineno)
/dports/devel/tla/tla-1.3.5/src/tla/libarch/
H A Dfile-diffs.c31 t_uchar * orig_loc = 0; in arch_file_get_or_diff() local
51 orig_loc = str_save (0, rel_peek_str (index, x, 0)); in arch_file_get_or_diff()
66 …ch_invoke_diff (out_fd, orig_path ? orig_path : (t_uchar *)"/dev/null", orig_loc, mod_path, mod_lo… in arch_file_get_or_diff()
83 lim_free (0, orig_loc); in arch_file_get_or_diff()
H A Ddiffs.c123 const char * orig_path, const char * orig_loc, in arch_invoke_diff() argument
130 return arch_really_invoke_diff (output_fd, orig_path, orig_loc, mod_path, mod_loc, NULL); in arch_invoke_diff()
135 const char * orig_path, const char * orig_loc, in arch_really_invoke_diff() argument
142 if (orig_loc) in arch_really_invoke_diff()
144 orig_label = file_name_in_vicinity (0, "orig", orig_loc + 2); in arch_really_invoke_diff()
H A Ddiffs.h25 const char * orig_path, const char * orig_loc,
30 const char * orig_path, const char * orig_loc,
H A Dmake-changeset.c57 const t_uchar * orig_loc,
67 const t_uchar * orig_loc,
1032 const t_uchar * orig_loc, in arch_changeset_add_diffs() argument
1095 rel_make_record_2_taking (rel_make_field_str (orig_loc), in arch_changeset_add_diffs()
1102 rel_make_record_2_taking (rel_make_field_str (orig_loc), in arch_changeset_add_diffs()
1115 orig_loc_dir = file_name_directory_file (0, orig_loc); in arch_changeset_add_diffs()
1312 const t_uchar * orig_loc, in emit_dir_patches() argument
1329 orig_path = file_name_in_vicinity (0, orig, orig_loc); in emit_dir_patches()
1415 const t_uchar * orig_loc, in emit_file_or_symlink_patches() argument
1433 orig_path = file_name_in_vicinity (0, orig, orig_loc); in emit_file_or_symlink_patches()
[all …]
H A Dmake-changeset.h86 const t_uchar * orig_loc,
/dports/devel/eric6/eric6-21.11/eric/eric6/Plugins/CheckerPlugins/SyntaxChecker/pyflakes/
H A Dmessages.py84 def __init__(self, filename, loc, name, orig_loc): argument
94 self.message_args = (name, orig_loc.lineno)
104 def __init__(self, filename, loc, name, orig_loc): argument
114 self.message_args = (name, orig_loc.lineno)
124 def __init__(self, filename, loc, name, orig_loc): argument
134 self.message_args = (name, orig_loc.lineno)
264 def __init__(self, filename, loc, name, orig_loc): argument
274 if orig_loc is None:
280 self.message_args = (name, orig_loc.lineno)
/dports/lang/perl5.30/perl-5.30.3/ext/POSIX/t/
H A Dtime.t55 my $orig_loc = 'C';
57 $orig_loc = setlocale(LC_TIME) || die "Cannot get locale information: $!";
81 setlocale(LC_TIME, $orig_loc) || die "Cannot setlocale() back to orig: $!";
/dports/devel/p5-version/version-0.9929/t/
H A Dsurvey_locales4 my $orig_loc = setlocale( LC_ALL );
15 $loc = setlocale( LC_ALL, $orig_loc);
H A D07locale.t29 my $orig_loc = setlocale(LC_NUMERIC);
58 setlocale( LC_ALL, $orig_loc); # reset this before possible skip
/dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/include/objtools/edit/
H A Dloc_edit.hpp99 static CRef<CSeq_loc> ConvertToJoin(const CSeq_loc& orig_loc, bool &changed);
100 static CRef<CSeq_loc> ConvertToOrder(const CSeq_loc& orig_loc, bool &changed);
103 static bool HasNulls(const CSeq_loc& orig_loc);
/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/include/objtools/edit/
H A Dloc_edit.hpp99 static CRef<CSeq_loc> ConvertToJoin(const CSeq_loc& orig_loc, bool &changed);
100 static CRef<CSeq_loc> ConvertToOrder(const CSeq_loc& orig_loc, bool &changed);
103 static bool HasNulls(const CSeq_loc& orig_loc);
/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/algo/sequence/
H A Dproject_exons.cpp303 static CRef<CSeq_loc> TweakExon(const CSeq_loc& orig_loc, bool convert_overlaps) in TweakExon()
305 if(!orig_loc.IsPacked_int()) { in TweakExon()
309 CRef<CSeq_loc> loc = Clone(orig_loc); in TweakExon()
332 << (orig_loc.Equals(*loc) ? "equal" : "not-equal") in TweakExon()
344 Validate(orig_loc, *loc); in TweakExon()
691 static void Validate(const CSeq_loc& orig_loc, const CSeq_loc& final_loc) in Validate()
693 if( sequence::GetStart(orig_loc, NULL, eExtreme_Positional) in Validate()
700 if( sequence::GetStop(orig_loc, NULL, eExtreme_Positional) in Validate()
708 != sequence::GetLength(orig_loc, NULL) % 3) in Validate()
736 << AsString(orig_loc.GetPacked_int()) in Validate()
/dports/lang/perl5.34/perl-5.34.0/cpan/version/t/
H A D07locale.t29 my $orig_loc = setlocale(LC_NUMERIC);
58 setlocale( LC_ALL, $orig_loc); # reset this before possible skip
/dports/lang/perl5.30/perl-5.30.3/cpan/version/t/
H A D07locale.t29 my $orig_loc = setlocale(LC_NUMERIC);
58 setlocale( LC_ALL, $orig_loc); # reset this before possible skip
/dports/lang/perl5.32/perl-5.32.1/cpan/version/t/
H A D07locale.t29 my $orig_loc = setlocale(LC_NUMERIC);
58 setlocale( LC_ALL, $orig_loc); # reset this before possible skip
/dports/lang/perl5-devel/perl5-5.35.4-102-ge43d289c7c/cpan/version/t/
H A D07locale.t29 my $orig_loc = setlocale(LC_NUMERIC);
58 setlocale( LC_ALL, $orig_loc); # reset this before possible skip
/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/objtools/edit/
H A Dloc_edit.cpp657 bool CLocationEditPolicy::HasNulls(const CSeq_loc& orig_loc) in HasNulls() argument
659 if (orig_loc.Which() == CSeq_loc::e_Mix) { in HasNulls()
660 ITERATE(CSeq_loc_mix::Tdata, it, orig_loc.GetMix().Get()) { in HasNulls()
674 if (!HasNulls(orig_loc)) { in ConvertToJoin()
675 new_loc->Assign(orig_loc); in ConvertToJoin()
677 CSeq_loc_CI ci(orig_loc); in ConvertToJoin()
698 if (HasNulls(orig_loc)) { in ConvertToOrder()
699 new_loc->Assign(orig_loc); in ConvertToOrder()
702 switch(orig_loc.Which()) { in ConvertToOrder()
712 new_loc->Assign(orig_loc); in ConvertToOrder()
[all …]
/dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/src/objtools/edit/
H A Dloc_edit.cpp657 bool CLocationEditPolicy::HasNulls(const CSeq_loc& orig_loc) in HasNulls() argument
659 if (orig_loc.Which() == CSeq_loc::e_Mix) { in HasNulls()
660 ITERATE(CSeq_loc_mix::Tdata, it, orig_loc.GetMix().Get()) { in HasNulls()
674 if (!HasNulls(orig_loc)) { in ConvertToJoin()
675 new_loc->Assign(orig_loc); in ConvertToJoin()
677 CSeq_loc_CI ci(orig_loc); in ConvertToJoin()
698 if (HasNulls(orig_loc)) { in ConvertToOrder()
699 new_loc->Assign(orig_loc); in ConvertToOrder()
702 switch(orig_loc.Which()) { in ConvertToOrder()
712 new_loc->Assign(orig_loc); in ConvertToOrder()
[all …]
/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/objmgr/
H A Dseq_loc_cvt.cpp1216 CConstRef<CSeq_loc> orig_loc; in Convert() local
1219 orig_loc = &obj.GetFeatFast()->GetLocation(); in Convert()
1222 orig_loc = &obj.GetFeatFast()->GetProduct(); in Convert()
1242 orig_loc = created_loc; in Convert()
1245 Convert(*orig_loc, mapped_loc); in Convert()
1319 CConstRef<CSeq_loc> orig_loc; in Convert() local
1322 orig_loc = &obj.GetFeatFast()->GetLocation(); in Convert()
1325 orig_loc = &obj.GetFeatFast()->GetProduct(); in Convert()
1345 orig_loc = created_loc; in Convert()
1348 Convert(*orig_loc, mapped_loc); in Convert()
/dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/src/objmgr/
H A Dseq_loc_cvt.cpp1216 CConstRef<CSeq_loc> orig_loc; in Convert() local
1219 orig_loc = &obj.GetFeatFast()->GetLocation(); in Convert()
1222 orig_loc = &obj.GetFeatFast()->GetProduct(); in Convert()
1242 orig_loc = created_loc; in Convert()
1245 Convert(*orig_loc, mapped_loc); in Convert()
1319 CConstRef<CSeq_loc> orig_loc; in Convert() local
1322 orig_loc = &obj.GetFeatFast()->GetLocation(); in Convert()
1325 orig_loc = &obj.GetFeatFast()->GetProduct(); in Convert()
1345 orig_loc = created_loc; in Convert()
1348 Convert(*orig_loc, mapped_loc); in Convert()
/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/include/misc/hgvs/
H A Dvariation_util.hpp150 void SetVariantProperties(CVariantProperties& prop, const CSeq_loc& orig_loc);
/dports/x11-wm/picom/picom-8.2/src/backend/gl/
H A Dgl_common.c691 glUniform2f(p->orig_loc, -(GLfloat)extent_resized->x1, in gl_blur()
700 glUniform2f(p->orig_loc, 0, 0); in gl_blur()
771 int orig_loc = glGetUniformLocation(ret->prog, "orig"); in gl_win_shader_from_string() local
772 glUniform2f(orig_loc, 0, 0); in gl_win_shader_from_string()
1088 pass->orig_loc = glGetUniformLocationChecked(pass->prog, "orig"); in gl_create_blur_context()
1100 pass->orig_loc = glGetUniformLocationChecked(pass->prog, "orig"); in gl_create_blur_context()

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