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Searched refs:orthoQualifier (Results 1 – 2 of 2) sorted by relevance

/dports/biology/artemis/artemis-17.0.1-11-g3e43d27e/uk/ac/sanger/artemis/components/genebuilder/ortholog/
H A DMatchPanel.java167 final Qualifier orthoQualifier = matchQualifiers.getQualifierByName(ORTHOLOG); in createMatchQualifiersComponent() local
197 if(orthoQualifier != null || paraQualifier != null) in createMatchQualifiersComponent()
200 if(orthoQualifier != null && orthoQualifier instanceof QualifierLazyLoading) in createMatchQualifiersComponent()
201 ((QualifierLazyLoading)orthoQualifier).setForceLoad(true); in createMatchQualifiersComponent()
206 if(OrthoParalogTable.hasOrthoParlaog(orthoQualifier, paraQualifier, in createMatchQualifiersComponent()
212 orthoparaLogTable = new OrthoParalogTable(doc, orthoQualifier, in createMatchQualifiersComponent()
237 if(OrthoParalogTable.hasCluster(orthoQualifier, paraQualifier, in createMatchQualifiersComponent()
241 if(OrthoParalogTable.hasOrthoParlaog(orthoQualifier, paraQualifier, in createMatchQualifiersComponent()
248 clusterTable = new OrthoParalogTable(doc, orthoQualifier, in createMatchQualifiersComponent()
408 final Qualifier orthoQualifier = matchQualifiers.getQualifierByName(ORTHOLOG); in addOrthoParalog() local
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H A DOrthoParalogTable.java401 protected static boolean hasCluster(final Qualifier orthoQualifier, in hasCluster() argument
405 if(hasClusterOrOrthoParalog(true, orthoQualifier, feature)) in hasCluster()
414 protected static boolean hasOrthoParlaog(final Qualifier orthoQualifier, in hasOrthoParlaog() argument
418 if(hasClusterOrOrthoParalog(false, orthoQualifier, feature)) in hasOrthoParlaog()