Searched refs:outsideTree (Results 1 – 1 of 1) sorted by relevance
413 …JunctionTreeLinkedDeBruijnGraph.ThreadingTree outsideTree = junctionTrees.get(assembler.findKmer(n… in testSimpleJuncionTreeLoopingReference() local415 Assert.assertNotNull(outsideTree); // Make sure we actually have tree data for that site in testSimpleJuncionTreeLoopingReference()422 List<String> outsideChoices = outsideTree.getPathsPresentAsBaseChoiceStrings(); in testSimpleJuncionTreeLoopingReference()443 …JunctionTreeLinkedDeBruijnGraph.ThreadingTree outsideTree = junctionTrees.get(assembler.findKmer(n… in testSimpleJuncionTreeThriceLoopingReference() local445 Assert.assertNotNull(outsideTree); // Make sure we actually have tree data for that site in testSimpleJuncionTreeThriceLoopingReference()453 List<String> outsideChoices = outsideTree.getPathsPresentAsBaseChoiceStrings(); in testSimpleJuncionTreeThriceLoopingReference()