Home
last modified time | relevance | path

Searched refs:overflow_buf_size (Results 1 – 24 of 24) sorted by relevance

/dports/biology/plink/plink-ng-79b2df8c/2.0/
H A Dplink2_compress_stream.cc40 …e, uint32_t do_append, __maybe_unused uint32_t thread_ct, uintptr_t overflow_buf_size, char* overf… in InitCstreamZstd() argument
61 css_ptr->output.size = CstreamWkspaceReq(overflow_buf_size); in InitCstreamZstd()
68 …t32_t do_append, uint32_t output_zst, uint32_t thread_ct, uintptr_t overflow_buf_size, char* overf… in InitCstream() argument
72 …return InitCstreamZstd(out_fname, do_append, thread_ct, overflow_buf_size, overflow_buf, compress_… in InitCstream()
75 …t32_t do_append, uint32_t output_zst, uint32_t thread_ct, uintptr_t overflow_buf_size, CompressStr… in InitCstreamAlloc() argument
77 if (unlikely(bigstack_alloc_c(overflow_buf_size, &overflow_buf))) { in InitCstreamAlloc()
82 if (unlikely(bigstack_alloc_uc(CstreamWkspaceReq(overflow_buf_size), &compress_wkspace))) { in InitCstreamAlloc()
86 …PglErr reterr = InitCstream(out_fname, do_append, output_zst, thread_ct, overflow_buf_size, overfl… in InitCstreamAlloc()
H A Dplink2_compress_stream.h59 HEADER_INLINE uintptr_t CstreamWkspaceReq(uintptr_t overflow_buf_size) { in CstreamWkspaceReq() argument
60 return kCompressStreamBlock + MAXV(ZSTD_compressBound(overflow_buf_size), ZSTD_CStreamOutSize()); in CstreamWkspaceReq()
67 …t32_t do_append, uint32_t output_zst, uint32_t thread_ct, uintptr_t overflow_buf_size, char* overf…
70 …t32_t do_append, uint32_t output_zst, uint32_t thread_ct, uintptr_t overflow_buf_size, CompressStr…
H A Dplink2_matrix_calc.cc4994 uintptr_t overflow_buf_size = 3 * kMaxMediumLine; in CalcPca() local
5015 if (overflow_buf_size2 > overflow_buf_size) { in CalcPca()
5016 overflow_buf_size = overflow_buf_size2; in CalcPca()
5019 uintptr_t writebuf_alloc = overflow_buf_size; in CalcPca()
5021 writebuf_alloc += CstreamWkspaceReq(overflow_buf_size); in CalcPca()
5368 …name, 0, output_zst, max_thread_ct, overflow_buf_size, writebuf, R_CAST(unsigned char*, &(writebuf… in CalcPca()
6132 uintptr_t overflow_buf_alloc = overflow_buf_size; in ScoreReport()
6134 overflow_buf_alloc += CstreamWkspaceReq(overflow_buf_size); in ScoreReport()
6670 …, 0, output_zst, max_thread_ct, overflow_buf_size, overflow_buf, R_CAST(unsigned char*, &(overflow… in ScoreReport()
7600 uintptr_t overflow_buf_size; in Vscore() local
[all …]
H A Dplink2_data.cc48 … const uintptr_t overflow_buf_size = kCompressStreamBlock + kMaxIdSlen + 512 + 2 * max_allele_slen; variable
49 … reterr = InitCstreamAlloc(outname, 0, output_zst, thread_ct, overflow_buf_size, &css, &cswritep);
545 if (overflow_buf_size < 2 * kCompressStreamBlock) {
546 overflow_buf_size = 2 * kCompressStreamBlock;
549 … reterr = InitCstreamAlloc(outname, 0, output_zst, thread_ct, overflow_buf_size, &css, &cswritep);
3280 … reterr = InitCstreamAlloc(outname, 0, output_zst, thread_ct, overflow_buf_size, &css, &cswritep); in WriteBimSplit()
3617 if (overflow_buf_size < 2 * kCompressStreamBlock) { in WritePvarSplit()
3618 overflow_buf_size = 2 * kCompressStreamBlock; in WritePvarSplit()
3621 … reterr = InitCstreamAlloc(outname, 0, output_zst, thread_ct, overflow_buf_size, &css, &cswritep); in WritePvarSplit()
7695 if (overflow_buf_size < 2 * kCompressStreamBlock) {
[all …]
H A Dplink2_misc.cc3158 …reterr = InitCstreamAlloc(outname, 0, output_zst, max_thread_ct, overflow_buf_size, &css, &cswrite… in WriteAlleleFreqs()
3609 …reterr = InitCstreamAlloc(outname, 0, output_zst, max_thread_ct, overflow_buf_size, &css, &cswrite…
4112 const uintptr_t overflow_buf_size = kCompressStreamBlock + kMaxMediumLine + pheno_ct * 2; in WriteMissingnessReports() local
4114 …reterr = InitCstreamAlloc(outname, 0, output_zst, max_thread_ct, overflow_buf_size, &css, &cswrite… in WriteMissingnessReports()
4911 uintptr_t overflow_buf_alloc = overflow_buf_size;
4913 overflow_buf_alloc += CstreamWkspaceReq(overflow_buf_size);
4957 …, 0, output_zst, max_thread_ct, overflow_buf_size, overflow_buf, R_CAST(unsigned char*, &(overflow…
5158 …, 0, output_zst, max_thread_ct, overflow_buf_size, overflow_buf, R_CAST(unsigned char*, &(overflow…
7297 uintptr_t overflow_buf_alloc = overflow_buf_size; in SampleCounts()
7299 overflow_buf_alloc += CstreamWkspaceReq(overflow_buf_size); in SampleCounts()
[all …]
H A Dplink2_adjust.cc204 …const uintptr_t overflow_buf_size = kCompressStreamBlock + 2 * kMaxIdSlen + 512 + 2 * max_allele_s… in Multcomp() local
208 …reterr = InitCstreamAlloc(outname, 0, output_zst, max_thread_ct, overflow_buf_size, &css, &cswrite… in Multcomp()
H A Dplink2_import.cc8113 …const uintptr_t overflow_buf_size = kCompressStreamBlock + MAXV(write_chunk_ubound, kCompressStrea… in BcfToPgen() local
9649 const uintptr_t overflow_buf_size = kCompressStreamBlock + max_line_blen; in OxGenToPgen() local
9651 …reterr = InitCstreamAlloc(outname, 0, output_zst, 1, overflow_buf_size, &pvar_css, &pvar_cswritep); in OxGenToPgen()
11852 const uintptr_t overflow_buf_size = 2 * kCompressStreamBlock + kCacheline; in OxBgenToPgen() local
11853 …reterr = InitCstreamAlloc(outname, 0, output_zst, 1, overflow_buf_size, &pvar_css, &pvar_cswritep); in OxBgenToPgen()
13655 const uintptr_t overflow_buf_size = kCompressStreamBlock + max_line_blen; in OxHapslegendToPgen() local
13656 …reterr = InitCstreamAlloc(outname, 0, output_zst, 1, overflow_buf_size, &pvar_css, &pvar_cswritep); in OxHapslegendToPgen()
14760 const uintptr_t overflow_buf_size = kCompressStreamBlock + kDecompressChunkSize + max_line_blen; in Plink1DosageToPgen() local
14761 …reterr = InitCstreamAlloc(outname, 0, output_zst, 1, overflow_buf_size, &pvar_css, &pvar_cswritep); in Plink1DosageToPgen()
15578 const uintptr_t overflow_buf_size = 2 * kCompressStreamBlock; in GenerateDummy() local
[all …]
H A Dplink2_glm.cc5389 …uint32_t max_thread_ct, uintptr_t pgr_alloc_cacheline_ct, uintptr_t overflow_buf_size, uint32_t lo… in GlmLogistic() argument
5454 reterr = InitCstreamAlloc(outname, 0, output_zst, 1, overflow_buf_size, &css, &cswritep); in GlmLogistic()
7592 …uint32_t max_thread_ct, uintptr_t pgr_alloc_cacheline_ct, uintptr_t overflow_buf_size, uint32_t lo… in GlmLinear() argument
7656 reterr = InitCstreamAlloc(outname, 0, output_zst, 1, overflow_buf_size, &css, &cswritep); in GlmLinear()
9884 uintptr_t cstream_alloc_size = RoundUpPow2(overflow_buf_size, kCacheline); in GlmLinearBatch()
9886 cstream_alloc_size += RoundUpPow2(CstreamWkspaceReq(overflow_buf_size), kCacheline); in GlmLinearBatch()
10037 …reterr = InitCstreamAlloc(outname, 0, output_zst, 1, overflow_buf_size, &(css_arr[fidx]), &cswrite… in GlmLinearBatch()
10712 …const uintptr_t overflow_buf_size = kCompressStreamBlock + 2 * kMaxIdSlen + max_chr_blen + kMaxIdS… in GlmMain() local
11908 …, ln_pfilter, output_min_ln, max_thread_ct, pgr_alloc_cacheline_ct, overflow_buf_size, local_sampl… in GlmMain()
12546 …, ln_pfilter, output_min_ln, max_thread_ct, pgr_alloc_cacheline_ct, overflow_buf_size, local_sampl… in GlmMain()
[all …]
/dports/print/ghostscript7-x11/ghostscript-7.07/ijs/
H A Dijs_server.c84 int overflow_buf_size; member
751 ctx->overflow_buf_size = size - (ctx->buf_size - ctx->buf_ix); in ijs_server_proc_send_data_block()
752 ctx->overflow_buf = (char *)malloc (ctx->overflow_buf_size); in ijs_server_proc_send_data_block()
760 ctx->overflow_buf_size); in ijs_server_proc_send_data_block()
872 int n_bytes = ctx->overflow_buf_size - ctx->overflow_buf_ix; in ijs_server_get_data()
878 if (ctx->overflow_buf_ix == ctx->overflow_buf_size) in ijs_server_get_data()
882 ctx->overflow_buf_size = 0; in ijs_server_get_data()
/dports/print/ghostscript7-base/ghostscript-7.07/ijs/
H A Dijs_server.c84 int overflow_buf_size; member
751 ctx->overflow_buf_size = size - (ctx->buf_size - ctx->buf_ix); in ijs_server_proc_send_data_block()
752 ctx->overflow_buf = (char *)malloc (ctx->overflow_buf_size); in ijs_server_proc_send_data_block()
760 ctx->overflow_buf_size); in ijs_server_proc_send_data_block()
872 int n_bytes = ctx->overflow_buf_size - ctx->overflow_buf_ix; in ijs_server_get_data()
878 if (ctx->overflow_buf_ix == ctx->overflow_buf_size) in ijs_server_get_data()
882 ctx->overflow_buf_size = 0; in ijs_server_get_data()
/dports/print/libijs/ijs-0.35/
H A Dijs_server.c84 int overflow_buf_size; member
751 ctx->overflow_buf_size = size - (ctx->buf_size - ctx->buf_ix); in ijs_server_proc_send_data_block()
752 ctx->overflow_buf = (char *)malloc (ctx->overflow_buf_size); in ijs_server_proc_send_data_block()
760 ctx->overflow_buf_size); in ijs_server_proc_send_data_block()
872 int n_bytes = ctx->overflow_buf_size - ctx->overflow_buf_ix; in ijs_server_get_data()
878 if (ctx->overflow_buf_ix == ctx->overflow_buf_size) in ijs_server_get_data()
882 ctx->overflow_buf_size = 0; in ijs_server_get_data()
/dports/print/hplip/hplip-3.20.6/prnt/hpijs/
H A Dijs_server.c84 int overflow_buf_size; member
751 ctx->overflow_buf_size = size - (ctx->buf_size - ctx->buf_ix); in ijs_server_proc_send_data_block()
752 ctx->overflow_buf = (char *)malloc (ctx->overflow_buf_size); in ijs_server_proc_send_data_block()
760 ctx->overflow_buf_size); in ijs_server_proc_send_data_block()
872 int n_bytes = ctx->overflow_buf_size - ctx->overflow_buf_ix; in ijs_server_get_data()
878 if (ctx->overflow_buf_ix == ctx->overflow_buf_size) in ijs_server_get_data()
882 ctx->overflow_buf_size = 0; in ijs_server_get_data()
/dports/print/ghostscript8-x11/ghostscript-8.71/ijs/
H A Dijs_server.c84 int overflow_buf_size; member
763 ctx->overflow_buf_size = size - (ctx->buf_size - ctx->buf_ix); in ijs_server_proc_send_data_block()
764 ctx->overflow_buf = (char *)malloc (ctx->overflow_buf_size); in ijs_server_proc_send_data_block()
772 ctx->overflow_buf_size); in ijs_server_proc_send_data_block()
884 int n_bytes = ctx->overflow_buf_size - ctx->overflow_buf_ix; in ijs_server_get_data()
890 if (ctx->overflow_buf_ix == ctx->overflow_buf_size) in ijs_server_get_data()
894 ctx->overflow_buf_size = 0; in ijs_server_get_data()
/dports/print/ghostscript9-x11/ghostscript-9.06/ijs/
H A Dijs_server.c84 int overflow_buf_size; member
763 ctx->overflow_buf_size = size - (ctx->buf_size - ctx->buf_ix); in ijs_server_proc_send_data_block()
764 ctx->overflow_buf = (char *)malloc (ctx->overflow_buf_size); in ijs_server_proc_send_data_block()
772 ctx->overflow_buf_size); in ijs_server_proc_send_data_block()
884 int n_bytes = ctx->overflow_buf_size - ctx->overflow_buf_ix; in ijs_server_get_data()
890 if (ctx->overflow_buf_ix == ctx->overflow_buf_size) in ijs_server_get_data()
894 ctx->overflow_buf_size = 0; in ijs_server_get_data()
/dports/print/ghostscript9-base/ghostscript-9.06/ijs/
H A Dijs_server.c84 int overflow_buf_size; member
763 ctx->overflow_buf_size = size - (ctx->buf_size - ctx->buf_ix); in ijs_server_proc_send_data_block()
764 ctx->overflow_buf = (char *)malloc (ctx->overflow_buf_size); in ijs_server_proc_send_data_block()
772 ctx->overflow_buf_size); in ijs_server_proc_send_data_block()
884 int n_bytes = ctx->overflow_buf_size - ctx->overflow_buf_ix; in ijs_server_get_data()
890 if (ctx->overflow_buf_ix == ctx->overflow_buf_size) in ijs_server_get_data()
894 ctx->overflow_buf_size = 0; in ijs_server_get_data()
/dports/print/ghostscript8-base/ghostscript-8.71/ijs/
H A Dijs_server.c84 int overflow_buf_size; member
763 ctx->overflow_buf_size = size - (ctx->buf_size - ctx->buf_ix); in ijs_server_proc_send_data_block()
764 ctx->overflow_buf = (char *)malloc (ctx->overflow_buf_size); in ijs_server_proc_send_data_block()
772 ctx->overflow_buf_size); in ijs_server_proc_send_data_block()
884 int n_bytes = ctx->overflow_buf_size - ctx->overflow_buf_ix; in ijs_server_get_data()
890 if (ctx->overflow_buf_ix == ctx->overflow_buf_size) in ijs_server_get_data()
894 ctx->overflow_buf_size = 0; in ijs_server_get_data()
/dports/lang/erlang-runtime24/otp-OTP-24.1.7/erts/lib_src/common/
H A Derl_memory_trace_parser.c142 size_t overflow_buf_size; member
293 statep->overflow_buf_size = DEFAULT_OVERFLOW_BUF_SZ; in emtp_state_new()
1697 if (sz > statep->overflow_buf_size) { in emtp_parse()
1702 statep->overflow_buf_size = buf_sz; in emtp_parse()
1800 if (sz > statep->overflow_buf_size) { in emtp_parse()
1804 statep->overflow_buf_size = 0; in emtp_parse()
1807 statep->overflow_buf_size = sz; in emtp_parse()
/dports/lang/erlang-runtime22/otp-OTP-22.3.4.24/erts/lib_src/common/
H A Derl_memory_trace_parser.c142 size_t overflow_buf_size; member
293 statep->overflow_buf_size = DEFAULT_OVERFLOW_BUF_SZ; in emtp_state_new()
1697 if (sz > statep->overflow_buf_size) { in emtp_parse()
1702 statep->overflow_buf_size = buf_sz; in emtp_parse()
1800 if (sz > statep->overflow_buf_size) { in emtp_parse()
1804 statep->overflow_buf_size = 0; in emtp_parse()
1807 statep->overflow_buf_size = sz; in emtp_parse()
/dports/lang/erlang-runtime23/otp-OTP-23.3.4.10/erts/lib_src/common/
H A Derl_memory_trace_parser.c142 size_t overflow_buf_size; member
293 statep->overflow_buf_size = DEFAULT_OVERFLOW_BUF_SZ; in emtp_state_new()
1697 if (sz > statep->overflow_buf_size) { in emtp_parse()
1702 statep->overflow_buf_size = buf_sz; in emtp_parse()
1800 if (sz > statep->overflow_buf_size) { in emtp_parse()
1804 statep->overflow_buf_size = 0; in emtp_parse()
1807 statep->overflow_buf_size = sz; in emtp_parse()
/dports/lang/erlang-wx/otp-OTP-24.1.7/erts/lib_src/common/
H A Derl_memory_trace_parser.c142 size_t overflow_buf_size; member
293 statep->overflow_buf_size = DEFAULT_OVERFLOW_BUF_SZ; in emtp_state_new()
1697 if (sz > statep->overflow_buf_size) { in emtp_parse()
1702 statep->overflow_buf_size = buf_sz; in emtp_parse()
1800 if (sz > statep->overflow_buf_size) { in emtp_parse()
1804 statep->overflow_buf_size = 0; in emtp_parse()
1807 statep->overflow_buf_size = sz; in emtp_parse()
/dports/lang/erlang/otp-OTP-24.1.7/erts/lib_src/common/
H A Derl_memory_trace_parser.c142 size_t overflow_buf_size; member
293 statep->overflow_buf_size = DEFAULT_OVERFLOW_BUF_SZ; in emtp_state_new()
1697 if (sz > statep->overflow_buf_size) { in emtp_parse()
1702 statep->overflow_buf_size = buf_sz; in emtp_parse()
1800 if (sz > statep->overflow_buf_size) { in emtp_parse()
1804 statep->overflow_buf_size = 0; in emtp_parse()
1807 statep->overflow_buf_size = sz; in emtp_parse()
/dports/lang/erlang-java/otp-OTP-24.1.7/erts/lib_src/common/
H A Derl_memory_trace_parser.c142 size_t overflow_buf_size; member
293 statep->overflow_buf_size = DEFAULT_OVERFLOW_BUF_SZ; in emtp_state_new()
1697 if (sz > statep->overflow_buf_size) { in emtp_parse()
1702 statep->overflow_buf_size = buf_sz; in emtp_parse()
1800 if (sz > statep->overflow_buf_size) { in emtp_parse()
1804 statep->overflow_buf_size = 0; in emtp_parse()
1807 statep->overflow_buf_size = sz; in emtp_parse()
/dports/lang/erlang-runtime21/otp-OTP-21.3.8.24/erts/lib_src/common/
H A Derl_memory_trace_parser.c142 size_t overflow_buf_size; member
293 statep->overflow_buf_size = DEFAULT_OVERFLOW_BUF_SZ; in emtp_state_new()
1697 if (sz > statep->overflow_buf_size) { in emtp_parse()
1702 statep->overflow_buf_size = buf_sz; in emtp_parse()
1800 if (sz > statep->overflow_buf_size) { in emtp_parse()
1804 statep->overflow_buf_size = 0; in emtp_parse()
1807 statep->overflow_buf_size = sz; in emtp_parse()
/dports/biology/plink/plink-ng-79b2df8c/2.0/include/
H A Dplink2_bgzf.cc401 const uint32_t overflow_buf_size = kMaxBgzfDecompressedBlockSize * (decompress_thread_ct + 1); in BgzfRawMtStreamInit() local
403 …if (unlikely(cachealigned_malloc(2 * (cwr_aligned_size + cwd_aligned_size + overflow_buf_size), &r… in BgzfRawMtStreamInit()
415 raw_alloc = &(raw_alloc[overflow_buf_size]); in BgzfRawMtStreamInit()