Searched refs:parse_deflines (Results 1 – 10 of 10) sorted by relevance
| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/algo/cobalt/unit_test/ |
| H A D | cobalt_test_util.cpp | 54 bool parse_deflines /* = false*/, in ReadFastaQueries() argument
67 if (!parse_deflines) { in ReadFastaQueries()
100 CRef<CScope> scope, bool parse_deflines /* = false*/, in ReadMsa() argument
116 if (!parse_deflines) { in ReadMsa()
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| H A D | cobalt_test_util.hpp | 56 bool parse_deflines = false,
68 CRef<CScope> scope, bool parse_deflines = false,
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| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/algo/blast/blastinput/ |
| H A D | blast_input_aux.cpp | 216 bool parse_deflines, in ReadSequencesToBlast() argument
226 iconfig.SetBelieveDeflines(parse_deflines); in ReadSequencesToBlast()
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| H A D | blast_args.cpp | 1824 const bool parse_deflines = args.Exist(kArgParseDeflines) in ExtractAlgorithmOptions() local
1833 subj_range, parse_deflines, in ExtractAlgorithmOptions()
2438 const bool parse_deflines = args.Exist(kArgParseDeflines) in ExtractAlgorithmOptions() local
2446 subj_range, parse_deflines, in ExtractAlgorithmOptions()
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| /dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/src/algo/blast/blastinput/ |
| H A D | blast_input_aux.cpp | 216 bool parse_deflines, in ReadSequencesToBlast() argument
226 iconfig.SetBelieveDeflines(parse_deflines); in ReadSequencesToBlast()
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| H A D | blast_args.cpp | 1824 const bool parse_deflines = args.Exist(kArgParseDeflines) in ExtractAlgorithmOptions() local
1833 subj_range, parse_deflines, in ExtractAlgorithmOptions()
2438 const bool parse_deflines = args.Exist(kArgParseDeflines) in ExtractAlgorithmOptions() local
2446 subj_range, parse_deflines, in ExtractAlgorithmOptions()
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| /dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/include/algo/blast/blastinput/ |
| H A D | blast_input_aux.hpp | 278 bool parse_deflines,
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| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/include/algo/blast/blastinput/ |
| H A D | blast_input_aux.hpp | 278 bool parse_deflines,
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| /dports/biology/ncbi-toolkit/ncbi/tools/ |
| H A D | readdb.h | 1759 Boolean parse_deflines, /* [in] input contains parseable deflines? */
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| H A D | readdb.c | 7901 sparse_idx, Boolean test_non_unique, Boolean parse_deflines, in FDBOptionsNew() argument
7935 options->parse_mode = parse_deflines; in FDBOptionsNew()
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