/dports/biology/plink/plink-ng-79b2df8c/2.0/pgenlibr/R/ |
H A D | RcppExports.R | 8 GetRawSampleCt <- function(pgen) { argument 24 HardcallPhasePresent <- function(pgen) { argument 28 Buf <- function(pgen) { argument 29 .Call(`_pgenlibr_Buf`, pgen) 32 AlleleCodeBuf <- function(pgen) { argument 36 IntBuf <- function(pgen) { argument 37 .Call(`_pgenlibr_IntBuf`, pgen) 40 IntAlleleCodeBuf <- function(pgen) { argument 44 BoolBuf <- function(pgen) { argument 45 .Call(`_pgenlibr_BoolBuf`, pgen) [all …]
|
/dports/biology/plink/plink-ng-79b2df8c/2.0/pgenlibr/src/ |
H A D | RcppExports.cpp | 23 int GetRawSampleCt(List pgen); 68 bool HardcallPhasePresent(List pgen); 79 NumericVector Buf(List pgen); 85 rcpp_result_gen = Rcpp::wrap(Buf(pgen)); in _pgenlibr_Buf() 90 NumericVector AlleleCodeBuf(List pgen); 101 IntegerVector IntBuf(List pgen); 112 IntegerVector IntAlleleCodeBuf(List pgen); 123 LogicalVector BoolBuf(List pgen); 155 Read(pgen, buf, variant_num, allele_num); in _pgenlibr_Read() 211 void ClosePgen(List pgen); [all …]
|
H A D | pgenlibr.cpp | 722 int GetRawSampleCt(List pgen) { in GetRawSampleCt() argument 723 if (strcmp_r_c(pgen[0], "pgen")) { in GetRawSampleCt() 772 if (strcmp_r_c(pgen[0], "pgen")) { in HardcallPhasePresent() 780 NumericVector Buf(List pgen) { in Buf() argument 781 if (strcmp_r_c(pgen[0], "pgen")) { in Buf() 790 if (strcmp_r_c(pgen[0], "pgen")) { in AlleleCodeBuf() 798 IntegerVector IntBuf(List pgen) { in IntBuf() argument 799 if (strcmp_r_c(pgen[0], "pgen")) { in IntBuf() 808 if (strcmp_r_c(pgen[0], "pgen")) { in IntAlleleCodeBuf() 816 LogicalVector BoolBuf(List pgen) { in BoolBuf() argument [all …]
|
/dports/biology/plink/plink-ng-79b2df8c/2.0/Tests/TEST_DOSAGE_ROUND_TRIP/ |
H A D | run_tests.sh | 9 diff -q tmp_data.pgen tmp_data2.pgen 13 diff -q tmp_data.pgen tmp_data3.pgen 18 diff -q tmp_data.pgen tmp_data4.pgen 22 diff -q tmp_data.pgen tmp_data5.pgen 26 diff -q tmp_data.pgen tmp_data6.pgen 30 diff -q tmp_data.pgen tmp_data7.pgen
|
/dports/cad/xcircuit/xcircuit-3.10.30/ |
H A D | parameter.c | 338 genericptr *pgen; in indicateparams() local 474 genericptr *pgen; in exprsub() local 552 genericptr *pgen; in epsubstitute() local 657 for (pgen = TOPATH(&thiselem)->plist; pgen < in epsubstitute() 738 for (pgen = TOPATH(&thiselem)->plist; pgen < in epsubstitute() 2015 genericptr *pgen; in removenumericalp() local 2044 for (pgen = topobject->plist; pgen < topobject->plist in removenumericalp() 2259 genericptr *pgen; in searchinst() local 2263 for (pgen = topobj->plist; pgen < topobj->plist + topobj->parts; pgen++) { in searchinst() 2283 genericptr *pgen; in free_object_param() local [all …]
|
H A D | selection.c | 416 genericptr pgen; in checkforcycles() local 482 ppoly = TOPOLY(pgen); in addcycle() 486 parc = TOARC(pgen); in addcycle() 669 ppoly = TOPOLY(pgen); in advancecycle() 673 parc = TOARC(pgen); in advancecycle() 753 parc = TOARC(pgen); in removecycle() 1508 genericptr *pgen; in label_connect_cycles() local 1515 for (pgen = topobject->plist; pgen < topobject->plist + in label_connect_cycles() 1569 for (pgen = topobject->plist; pgen < topobject->plist + in inst_connect_cycles() 1640 genericptr *pgen; in reset_cycles() local [all …]
|
/dports/science/openbabel/openbabel-3.1.1/src/ops/ |
H A D | opalign.cpp | 123 OBOp* pgen = OBOp::FindType("gen2D"); in Do() local 124 if(pgen) in Do() 125 pgen->Do(pmol); in Do() 136 OBOp* pgen = (itr==pmap->end()) ? OBOp::FindType("gen2D") : OBOp::FindType("gen3D"); in Do() local 137 if(pgen) in Do() 138 pgen->Do(pmol); in Do() 147 OBOp* pgen = OBOp::FindType("gen2D"); in Do() local 148 if(pgen) in Do() 149 pgen->Do(pmol); in Do()
|
/dports/biology/plink/plink-ng-79b2df8c/2.0/Tests/TEST_MAF_FILTER/ |
H A D | run_tests.sh | 7 $1/pgen_compress tmp_data.bed tmp_data.pgen 2000 10 $1/pgen_compress -u new_filtered.pgen new_filtered.bed 14 diff -q new_filtered.pgen new_filtered2.pgen
|
/dports/misc/py-mxnet/incubator-mxnet-1.9.0/src/operator/random/ |
H A D | sampler.h | 89 RandGenerator<xpu, OType> *pgen, in Sample() 121 RandGenerator<xpu, OType> *pgen, in Sample() 148 RandGenerator<xpu, OType> *pgen, in Sample() 174 RandGenerator<xpu, OType> *pgen, in Sample() 176 LaunchRNG<SampleExponentialKernel<xpu>, xpu>(s, pgen, out.size(0), in Sample() 224 RandGenerator<xpu, OType> *pgen, in Sample() 228 RandGenerator<xpu, FType> *gen = reinterpret_cast<RandGenerator<xpu, FType> *>(pgen); in Sample() 284 RandGenerator<xpu, OType> *pgen, in Sample() 286 RandGenerator<xpu, float> *gen = reinterpret_cast<RandGenerator<xpu, float> *>(pgen); in Sample() 316 RandGenerator<xpu, OType> *pgen, in Sample() [all …]
|
H A D | multisample_op.h | 146 RandGenerator<xpu, OType> *pgen, 151 pgen, s); 159 RandGenerator<xpu, OType> *pgen, 165 pgen, s); 183 RandGenerator<xpu, OType> *pgen = ctx.requested[0].get_parallel_random<xpu, OType>(); 184 SamplerCaller<xpu, IType, OType, Sampler, inum>::op(inputs, outputs, pgen, s);
|
/dports/misc/mxnet/incubator-mxnet-1.9.0/src/operator/random/ |
H A D | sampler.h | 89 RandGenerator<xpu, OType> *pgen, in Sample() 121 RandGenerator<xpu, OType> *pgen, in Sample() 148 RandGenerator<xpu, OType> *pgen, in Sample() 174 RandGenerator<xpu, OType> *pgen, in Sample() 176 LaunchRNG<SampleExponentialKernel<xpu>, xpu>(s, pgen, out.size(0), in Sample() 224 RandGenerator<xpu, OType> *pgen, in Sample() 228 RandGenerator<xpu, FType> *gen = reinterpret_cast<RandGenerator<xpu, FType> *>(pgen); in Sample() 284 RandGenerator<xpu, OType> *pgen, in Sample() 286 RandGenerator<xpu, float> *gen = reinterpret_cast<RandGenerator<xpu, float> *>(pgen); in Sample() 316 RandGenerator<xpu, OType> *pgen, in Sample() [all …]
|
H A D | multisample_op.h | 146 RandGenerator<xpu, OType> *pgen, 151 pgen, s); 159 RandGenerator<xpu, OType> *pgen, 165 pgen, s); 183 RandGenerator<xpu, OType> *pgen = ctx.requested[0].get_parallel_random<xpu, OType>(); 184 SamplerCaller<xpu, IType, OType, Sampler, inum>::op(inputs, outputs, pgen, s);
|
/dports/math/gap/gap-4.11.0/pkg/cohomolo-1.6.8/standalone/progs.d/ |
H A D | nqmfns.c | 144 stkp=0; pgen=0; pex=0; pugen=0; exsgn=1; in collect() 149 spex[stkp]=pex; spugen[stkp]=pugen; spgen[stkp]=pgen; in collect() 152 e=expnt+pgen; in collect() 153 if (pgen==gen) in collect() 171 { if (pugen==pgen) pugen++; pgen++; pex= *(e+1); goto loop; } in collect() 173 { dp=comptr[gen]+2*pgen; p1= *dp; p2= *(dp+1); in collect() 176 { fac = (pugen==pgen) ? ex*pex*sgn : pex*sgn; setnr(p2); } in collect() 180 { if (pugen==pgen) in collect() 181 { spugen[stkp]= -pgen; in collect() 189 else pugen=pgen; in collect() [all …]
|
H A D | nqfns.c | 240 stkp=0; pgen=0; pex=0; pugen=0; exsgn=1; in collect() 261 fpg=pgen; fpex=pex; in collect() 322 fpg=pgen; fpex=pex; in collect() 359 e=expnt+pgen; in collect() 360 if (pgen==gen) in collect() 383 { if (pugen==pgen) pugen++; pgen++; pex= *(e+1); goto loop; } in collect() 384 else if (pgen>facexp) {pex=0; goto loop; } in collect() 388 { if (pugen==pgen) in collect() 389 { spugen[stkp]= -pgen; in collect() 399 else pugen=pgen; in collect() [all …]
|
H A D | nqfnsb.c | 240 stkp=0; pgen=0; pex=0; pugen=0; exsgn=1; in collect() 261 fpg=pgen; fpex=pex; in collect() 322 fpg=pgen; fpex=pex; in collect() 359 e=expnt+pgen; in collect() 360 if (pgen==gen) in collect() 383 { if (pugen==pgen) pugen++; pgen++; pex= *(e+1); goto loop; } in collect() 384 else if (pgen>facexp) {pex=0; goto loop; } in collect() 388 { if (pugen==pgen) in collect() 389 { spugen[stkp]= -pgen; in collect() 399 else pugen=pgen; in collect() [all …]
|
H A D | nqp3.c | 15 nb,np,*rno,*covrel,**pgen,*ps,*pf,*v1,*v2,**cbmat; in comprels() local 55 pgen=pcb; fscanf(ip,"%hd",&np); in comprels() 57 { pgen[i]=rpf; fscanf(ip,"%hd",rpf); p=rpf; rpf+=(1+ *p); in comprels() 89 { wc=wf-2; k=covrel[j]; k1=k/2+1; m= *pgen[k1]; in comprels() 90 if (k%2==0) { sgn=1; ps=pgen[k1]+1; pf=ps+m-2; } in comprels() 91 else { sgn= -1; pf=pgen[k1]+1; ps=pf+m-2; } in comprels()
|
H A D | nqp3b.c | 15 nb,np,*rno,*covrel,**pgen,*ps,*pf,*v1,*v2,**cbmat; in comprels() local 55 pgen=pcb; fscanf(ip,"%d",&np); in comprels() 57 { pgen[i]=rpf; fscanf(ip,"%d",rpf); p=rpf; rpf+=(1+ *p); in comprels() 89 { wc=wf-2; k=covrel[j]; k1=k/2+1; m= *pgen[k1]; in comprels() 90 if (k%2==0) { sgn=1; ps=pgen[k1]+1; pf=ps+m-2; } in comprels() 91 else { sgn= -1; pf=pgen[k1]+1; ps=pf+m-2; } in comprels()
|
/dports/devel/emscripten/emscripten-2.0.3/tests/third_party/python/ |
H A D | readme.md | 29 Now, you can run ``make``. It may fail trying to run ``pgen``. 34 ./configure && make Parser/pgen 37 Now, copy the generated ``Parser/pgen`` 39 the ``pgen`` executable as executable: 42 chmod +x Parser/pgen
|
/dports/emulators/qemu/qemu-6.2.0/meson/test cases/frameworks/8 flex/ |
H A D | meson.build | 24 pgen = generator(bison, variable 28 pfiles = pgen.process('parser.y') 30 e = executable('pgen', 'prog.c', build
|
/dports/emulators/qemu60/qemu-6.0.0/meson/test cases/frameworks/8 flex/ |
H A D | meson.build | 24 pgen = generator(bison, variable 28 pfiles = pgen.process('parser.y') 30 e = executable('pgen', 'prog.c', build
|
/dports/emulators/qemu5/qemu-5.2.0/meson/test cases/frameworks/8 flex/ |
H A D | meson.build | 24 pgen = generator(bison, variable 28 pfiles = pgen.process('parser.y') 30 e = executable('pgen', 'prog.c', build
|
/dports/devel/meson/meson-0.60.3/test cases/frameworks/8 flex/ |
H A D | meson.build | 24 pgen = generator(bison, variable 28 pfiles = pgen.process('parser.y') 30 e = executable('pgen', 'prog.c', build
|
/dports/emulators/qemu-devel/qemu-de8ed1055c2ce18c95f597eb10df360dcb534f99/meson/test cases/frameworks/8 flex/ |
H A D | meson.build | 24 pgen = generator(bison, variable 28 pfiles = pgen.process('parser.y') 30 e = executable('pgen', 'prog.c', build
|
/dports/devel/py-qutip/qutip-4.6.2/qutip/control/ |
H A D | pulseoptim.py | 453 pgen = optim.pulse_generator[j] 454 pgen.init_pulse() 455 init_amps[:, j] = pgen.gen_pulse() 457 pgen = optim.pulse_generator 459 init_amps[:, j] = pgen.gen_pulse() 1883 pgen = optim.pulse_generator[0] 1889 pgen.scaling = pulse_scaling 1890 pgen.offset = pulse_offset 1891 pgen.lbound = amp_lbound 1892 pgen.ubound = amp_ubound [all …]
|
/dports/devel/tcllib/tcllib-1.20/modules/pt/tests/ |
H A D | pt_pgen.tests | 2 # Testsuite for pt::pgen. 8 # TODO testing of the pt::pgen command API (#args, options, outputs) ... 43 …test pt-pgen-parse:${parseimpl}-rde:${rdeimpl}-stack:${stackimpl}-f:${format}-g:${glabel}-t:${labe… 58 …test pt-pgen-parse:${parseimpl}-rde:${rdeimpl}-stack:${stackimpl}-f:${format}-g:${glabel}-t:${labe… 105 test pt-pgen-parse:${parseimpl}-rde:${rdeimpl}-stack:${stackimpl}-f:${format}-g:${glabel}-3.$n \ 111 test pt-pgen-parse:${parseimpl}-rde:${rdeimpl}-stack:${stackimpl}-f:${format}-g:${glabel}-4.$n \ 121 test pt-pgen-parse:${parseimpl}-rde:${rdeimpl}-stack:${stackimpl}-f:${format}-g:${glabel}-5.$n \
|