Searched refs:phred_score (Results 1 – 11 of 11) sorted by relevance
/dports/biology/bcftools/bcftools-1.14/ |
H A D | bcftools.h | 113 static inline double phred_score(double prob) in phred_score() function
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H A D | vcfcnv.c | 1083 qual = phred_score(1 - qual/(isite - istart_pos)); in cnv_flush_viterbi() 1104 qual = phred_score(1 - qual/(isite - istart_pos)); in cnv_flush_viterbi()
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H A D | vcfroh.c | 528 double qual = phred_score(1.0 - fwd[i*2 + state]); in flush_viterbi() 655 … "ROH\t%s\t%s\t%d\t%d\t%.1f\n", name,chr,smpl->sites[ioff+j]+1, state, phred_score(1.0-pval[state]… in flush_viterbi()
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/dports/biology/bio-mocha/bcftools-1.14/ |
H A D | bcftools.h | 113 static inline double phred_score(double prob) in phred_score() function
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H A D | vcfcnv.c | 1083 qual = phred_score(1 - qual/(isite - istart_pos)); in cnv_flush_viterbi() 1104 qual = phred_score(1 - qual/(isite - istart_pos)); in cnv_flush_viterbi()
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H A D | vcfroh.c | 528 double qual = phred_score(1.0 - fwd[i*2 + state]); in flush_viterbi() 655 … "ROH\t%s\t%s\t%d\t%d\t%.1f\n", name,chr,smpl->sites[ioff+j]+1, state, phred_score(1.0-pval[state]… in flush_viterbi()
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/dports/biology/py-pysam/pysam-0.18.0/bcftools/ |
H A D | bcftools.h | 113 static inline double phred_score(double prob) in phred_score() function
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H A D | vcfcnv.c | 1083 qual = phred_score(1 - qual/(isite - istart_pos)); in cnv_flush_viterbi() 1104 qual = phred_score(1 - qual/(isite - istart_pos)); in cnv_flush_viterbi()
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H A D | vcfcnv.c.pysam.c | 1085 qual = phred_score(1 - qual/(isite - istart_pos)); in cnv_flush_viterbi() 1106 qual = phred_score(1 - qual/(isite - istart_pos)); in cnv_flush_viterbi()
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H A D | vcfroh.c | 528 double qual = phred_score(1.0 - fwd[i*2 + state]); in flush_viterbi() 655 … "ROH\t%s\t%s\t%d\t%d\t%.1f\n", name,chr,smpl->sites[ioff+j]+1, state, phred_score(1.0-pval[state]… in flush_viterbi()
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H A D | vcfroh.c.pysam.c | 530 double qual = phred_score(1.0 - fwd[i*2 + state]); in flush_viterbi() 657 … "ROH\t%s\t%s\t%d\t%d\t%.1f\n", name,chr,smpl->sites[ioff+j]+1, state, phred_score(1.0-pval[state]… in flush_viterbi()
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