Searched refs:pileup_name (Results 1 – 4 of 4) sorted by relevance
| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/sra/data_loaders/csra/test/ |
| H A D | test_csra_loader.cpp | 183 sel.ExcludeNamedAnnots(pileup_name); in BOOST_AUTO_TEST_CASE()
210 sel.AddNamedAnnots(pileup_name); in BOOST_AUTO_TEST_CASE()
268 sel.ExcludeNamedAnnots(pileup_name); in BOOST_AUTO_TEST_CASE()
295 sel.AddNamedAnnots(pileup_name); in BOOST_AUTO_TEST_CASE()
351 sel.ExcludeNamedAnnots(pileup_name); in BOOST_AUTO_TEST_CASE()
378 sel.AddNamedAnnots(pileup_name); in BOOST_AUTO_TEST_CASE()
438 sel.ExcludeNamedAnnots(pileup_name); in BOOST_AUTO_TEST_CASE()
477 sel.AddNamedAnnots(pileup_name); in BOOST_AUTO_TEST_CASE()
702 sel.ExcludeNamedAnnots(pileup_name); in BOOST_AUTO_TEST_CASE()
729 sel.AddNamedAnnots(pileup_name); in BOOST_AUTO_TEST_CASE()
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| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/sra/data_loaders/bam/test/ |
| H A D | test_bam_loader.cpp | 664 string bam_name, id, annot_name, pileup_name; in BOOST_AUTO_TEST_CASE() local
723 pileup_name = annot_name+PILEUP_NAME_SUFFIX; in BOOST_AUTO_TEST_CASE()
750 sel.AddNamedAnnots(pileup_name); in BOOST_AUTO_TEST_CASE()
1227 string bam_name, id, annot_name, pileup_name; in BOOST_AUTO_TEST_CASE() local
1267 pileup_name = annot_name+PILEUP_NAME_SUFFIX; in BOOST_AUTO_TEST_CASE()
1271 sel.AddNamedAnnots(pileup_name); in BOOST_AUTO_TEST_CASE()
1333 string bam_name, id, annot_name, pileup_name; in BOOST_AUTO_TEST_CASE() local
1373 pileup_name = annot_name+PILEUP_NAME_SUFFIX; in BOOST_AUTO_TEST_CASE()
1377 sel.AddNamedAnnots(pileup_name); in BOOST_AUTO_TEST_CASE()
1439 string bam_name, id, annot_name, pileup_name; in BOOST_AUTO_TEST_CASE() local
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| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/sra/data_loaders/csra/ |
| H A D | csraloader_impl.cpp | 1553 string align_name, pileup_name; in LoadAnnotMainSplit() local
1557 pileup_name = m_File->GetPileupAnnotName(); in LoadAnnotMainSplit()
1577 chunk->x_AddAnnotType(pileup_name, in LoadAnnotMainSplit()
1594 chunk->x_AddAnnotType(pileup_name, in LoadAnnotMainSplit()
1686 string pileup_name = m_File->GetPileupAnnotName(); in LoadAnnotMainChunk() local
1707 (pileup_name, in LoadAnnotMainChunk()
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| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/sra/data_loaders/bam/ |
| H A D | bamloader_impl.cpp | 1331 CAnnotName name, pileup_name; in LoadMainSplit() local
1336 pileup_name = CAnnotName(base + ' ' + PILEUP_NAME_SUFFIX); in LoadMainSplit()
1350 chunk->x_AddAnnotType(pileup_name, in LoadMainSplit()
1388 CAnnotName name, pileup_name; in CreateChunks() local
1393 pileup_name = CAnnotName(base + ' ' + PILEUP_NAME_SUFFIX); in CreateChunks()
1501 chunk->x_AddAnnotType(pileup_name, in CreateChunks()
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