/dports/biology/bcftools/bcftools-1.14/ |
H A D | peakfit.c | 149 hts_expand0(peak_t,pkf->npeaks,pkf->mpeaks,pkf->peaks); in peakfit_add_bounded_gaussian() 158 hts_expand0(double,pkf->nparams,pkf->mparams,pkf->params); in peakfit_add_bounded_gaussian() 239 hts_expand0(peak_t,pkf->npeaks,pkf->mpeaks,pkf->peaks); in peakfit_add_gaussian() 246 hts_expand0(double,pkf->nparams,pkf->mparams,pkf->params); in peakfit_add_gaussian() 319 hts_expand0(peak_t,pkf->npeaks,pkf->mpeaks,pkf->peaks); in peakfit_add_exp() 328 hts_expand0(double,pkf->nparams,pkf->mparams,pkf->params); in peakfit_add_exp() 403 pk->calc_f(pkf->nvals, pkf->xvals, pkf->vals, pk); in peakfit_calc_f() 431 pk->calc_df(pkf->nvals, pkf->xvals, pkf->yvals, pkf->vals, j, pk); in peakfit_calc_df() 452 pkf->peaks[i].calc_f(pkf->nvals, pkf->xvals, pkf->vals, &pkf->peaks[i]); in peakfit_evaluate() 468 pkf->peaks[i].print_func(&pkf->peaks[i], &pkf->str); in peakfit_sprint_func() [all …]
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H A D | peakfit.h | 33 void peakfit_reset(peakfit_t *pkf); 34 void peakfit_destroy(peakfit_t *pkf); 36 void peakfit_add_gaussian(peakfit_t *pkf, double a, double b, double c, int fit_mask); 38 void peakfit_add_exp(peakfit_t *pkf, double a, double b, double c, int fit_mask); 39 void peakfit_set_mc(peakfit_t *pkf, double xmin, double xmax, int iparam, int niter); 40 double peakfit_run(peakfit_t *pkf, int nvals, double *xvals, double *yvals); 41 double peakfit_evaluate(peakfit_t *pkf); 43 void peakfit_verbose(peakfit_t *pkf, int level); 44 void peakfit_get_params(peakfit_t *pkf, int ipk, double *params, int nparams); 45 void peakfit_set_params(peakfit_t *pkf, int ipk, double *params, int nparams); [all …]
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H A D | polysomy.c | 382 peakfit_t *pkf = peakfit_init(); in fit_curves() local 383 peakfit_verbose(pkf,args->verbose); in fit_curves() 415 peakfit_reset(pkf); in fit_curves() 423 peakfit_reset(pkf); in fit_curves() 425 peakfit_set_mc(pkf, 0.01,0.3,2,nmc); in fit_curves() 438 peakfit_reset(pkf); in fit_curves() 449 peakfit_reset(pkf); in fit_curves() 476 peakfit_reset(pkf); in fit_curves() 486 peakfit_reset(pkf); in fit_curves() 497 peakfit_reset(pkf); in fit_curves() [all …]
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/dports/biology/bio-mocha/bcftools-1.14/ |
H A D | peakfit.c | 149 hts_expand0(peak_t,pkf->npeaks,pkf->mpeaks,pkf->peaks); in peakfit_add_bounded_gaussian() 158 hts_expand0(double,pkf->nparams,pkf->mparams,pkf->params); in peakfit_add_bounded_gaussian() 239 hts_expand0(peak_t,pkf->npeaks,pkf->mpeaks,pkf->peaks); in peakfit_add_gaussian() 246 hts_expand0(double,pkf->nparams,pkf->mparams,pkf->params); in peakfit_add_gaussian() 319 hts_expand0(peak_t,pkf->npeaks,pkf->mpeaks,pkf->peaks); in peakfit_add_exp() 328 hts_expand0(double,pkf->nparams,pkf->mparams,pkf->params); in peakfit_add_exp() 403 pk->calc_f(pkf->nvals, pkf->xvals, pkf->vals, pk); in peakfit_calc_f() 431 pk->calc_df(pkf->nvals, pkf->xvals, pkf->yvals, pkf->vals, j, pk); in peakfit_calc_df() 452 pkf->peaks[i].calc_f(pkf->nvals, pkf->xvals, pkf->vals, &pkf->peaks[i]); in peakfit_evaluate() 468 pkf->peaks[i].print_func(&pkf->peaks[i], &pkf->str); in peakfit_sprint_func() [all …]
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H A D | peakfit.h | 33 void peakfit_reset(peakfit_t *pkf); 34 void peakfit_destroy(peakfit_t *pkf); 36 void peakfit_add_gaussian(peakfit_t *pkf, double a, double b, double c, int fit_mask); 38 void peakfit_add_exp(peakfit_t *pkf, double a, double b, double c, int fit_mask); 39 void peakfit_set_mc(peakfit_t *pkf, double xmin, double xmax, int iparam, int niter); 40 double peakfit_run(peakfit_t *pkf, int nvals, double *xvals, double *yvals); 41 double peakfit_evaluate(peakfit_t *pkf); 43 void peakfit_verbose(peakfit_t *pkf, int level); 44 void peakfit_get_params(peakfit_t *pkf, int ipk, double *params, int nparams); 45 void peakfit_set_params(peakfit_t *pkf, int ipk, double *params, int nparams); [all …]
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H A D | polysomy.c | 382 peakfit_t *pkf = peakfit_init(); in fit_curves() local 383 peakfit_verbose(pkf,args->verbose); in fit_curves() 415 peakfit_reset(pkf); in fit_curves() 423 peakfit_reset(pkf); in fit_curves() 425 peakfit_set_mc(pkf, 0.01,0.3,2,nmc); in fit_curves() 438 peakfit_reset(pkf); in fit_curves() 449 peakfit_reset(pkf); in fit_curves() 476 peakfit_reset(pkf); in fit_curves() 486 peakfit_reset(pkf); in fit_curves() 497 peakfit_reset(pkf); in fit_curves() [all …]
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/dports/misc/concourse/vault-bdd38fca2cff/helper/pgpkeys/ |
H A D | flag_test.go | 60 pkf := new(PubKeyFilesFlag) 61 err = pkf.Set(tempDir + "/pubkey1,@" + tempDir + "/pubkey2") 66 err = pkf.Set(tempDir + "/pubkey3") 72 if !reflect.DeepEqual(pkf.String(), fmt.Sprint(expected)) { 73 t.Fatalf("Bad: %#v", pkf) 97 pkf := new(PubKeyFilesFlag) 98 err = pkf.Set(tempDir + "/pubkey1,@" + tempDir + "/pubkey2") 103 err = pkf.Set(tempDir + "/pubkey3") 109 if !reflect.DeepEqual(pkf.String(), fmt.Sprint(expected)) { 126 pkf := new(PubKeyFilesFlag) [all …]
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/dports/sysutils/gomplate/gomplate-3.9.0/vendor/github.com/hashicorp/vault/helper/pgpkeys/ |
H A D | flag_test.go | 60 pkf := new(PubKeyFilesFlag) 61 err = pkf.Set(tempDir + "/pubkey1,@" + tempDir + "/pubkey2") 66 err = pkf.Set(tempDir + "/pubkey3") 72 if !reflect.DeepEqual(pkf.String(), fmt.Sprint(expected)) { 73 t.Fatalf("Bad: %#v", pkf) 97 pkf := new(PubKeyFilesFlag) 98 err = pkf.Set(tempDir + "/pubkey1,@" + tempDir + "/pubkey2") 103 err = pkf.Set(tempDir + "/pubkey3") 109 if !reflect.DeepEqual(pkf.String(), fmt.Sprint(expected)) { 126 pkf := new(PubKeyFilesFlag) [all …]
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/dports/security/vault/vault-1.8.2/helper/pgpkeys/ |
H A D | flag_test.go | 60 pkf := new(PubKeyFilesFlag) 61 err = pkf.Set(tempDir + "/pubkey1,@" + tempDir + "/pubkey2") 66 err = pkf.Set(tempDir + "/pubkey3") 72 if !reflect.DeepEqual(pkf.String(), fmt.Sprint(expected)) { 73 t.Fatalf("Bad: %#v", pkf) 97 pkf := new(PubKeyFilesFlag) 98 err = pkf.Set(tempDir + "/pubkey1,@" + tempDir + "/pubkey2") 103 err = pkf.Set(tempDir + "/pubkey3") 109 if !reflect.DeepEqual(pkf.String(), fmt.Sprint(expected)) { 126 pkf := new(PubKeyFilesFlag) [all …]
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/dports/sysutils/helmfile/helmfile-0.138.7/vendor/github.com/hashicorp/vault/helper/pgpkeys/ |
H A D | flag_test.go | 60 pkf := new(PubKeyFilesFlag) 61 err = pkf.Set(tempDir + "/pubkey1,@" + tempDir + "/pubkey2") 66 err = pkf.Set(tempDir + "/pubkey3") 72 if !reflect.DeepEqual(pkf.String(), fmt.Sprint(expected)) { 73 t.Fatalf("Bad: %#v", pkf) 97 pkf := new(PubKeyFilesFlag) 98 err = pkf.Set(tempDir + "/pubkey1,@" + tempDir + "/pubkey2") 103 err = pkf.Set(tempDir + "/pubkey3") 109 if !reflect.DeepEqual(pkf.String(), fmt.Sprint(expected)) { 126 pkf := new(PubKeyFilesFlag) [all …]
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/dports/www/fabio/fabio-1.5.14/vendor/github.com/hashicorp/vault/vault-0.6.0/helper/pgpkeys/ |
H A D | flag_test.go | 60 pkf := new(PubKeyFilesFlag) 61 err = pkf.Set(tempDir + "/pubkey1,@" + tempDir + "/pubkey2") 66 err = pkf.Set(tempDir + "/pubkey3") 72 if !reflect.DeepEqual(pkf.String(), fmt.Sprint(expected)) { 73 t.Fatalf("Bad: %#v", pkf) 97 pkf := new(PubKeyFilesFlag) 98 err = pkf.Set(tempDir + "/pubkey1,@" + tempDir + "/pubkey2") 103 err = pkf.Set(tempDir + "/pubkey3") 109 if !reflect.DeepEqual(pkf.String(), fmt.Sprint(expected)) { 126 pkf := new(PubKeyFilesFlag) [all …]
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/dports/sysutils/helmfile/vault-f6547fa8e820/helper/pgpkeys/ |
H A D | flag_test.go | 60 pkf := new(PubKeyFilesFlag) 61 err = pkf.Set(tempDir + "/pubkey1,@" + tempDir + "/pubkey2") 66 err = pkf.Set(tempDir + "/pubkey3") 72 if !reflect.DeepEqual(pkf.String(), fmt.Sprint(expected)) { 73 t.Fatalf("Bad: %#v", pkf) 97 pkf := new(PubKeyFilesFlag) 98 err = pkf.Set(tempDir + "/pubkey1,@" + tempDir + "/pubkey2") 103 err = pkf.Set(tempDir + "/pubkey3") 109 if !reflect.DeepEqual(pkf.String(), fmt.Sprint(expected)) { 126 pkf := new(PubKeyFilesFlag) [all …]
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/dports/misc/concourse/concourse-6.7.2/vendor/github.com/hashicorp/vault/helper/pgpkeys/ |
H A D | flag_test.go | 60 pkf := new(PubKeyFilesFlag) 61 err = pkf.Set(tempDir + "/pubkey1,@" + tempDir + "/pubkey2") 66 err = pkf.Set(tempDir + "/pubkey3") 72 if !reflect.DeepEqual(pkf.String(), fmt.Sprint(expected)) { 73 t.Fatalf("Bad: %#v", pkf) 97 pkf := new(PubKeyFilesFlag) 98 err = pkf.Set(tempDir + "/pubkey1,@" + tempDir + "/pubkey2") 103 err = pkf.Set(tempDir + "/pubkey3") 109 if !reflect.DeepEqual(pkf.String(), fmt.Sprint(expected)) { 126 pkf := new(PubKeyFilesFlag) [all …]
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/dports/sysutils/gomplate/vault-sdk-v0.1.13/helper/pgpkeys/ |
H A D | flag_test.go | 60 pkf := new(PubKeyFilesFlag) 61 err = pkf.Set(tempDir + "/pubkey1,@" + tempDir + "/pubkey2") 66 err = pkf.Set(tempDir + "/pubkey3") 72 if !reflect.DeepEqual(pkf.String(), fmt.Sprint(expected)) { 73 t.Fatalf("Bad: %#v", pkf) 97 pkf := new(PubKeyFilesFlag) 98 err = pkf.Set(tempDir + "/pubkey1,@" + tempDir + "/pubkey2") 103 err = pkf.Set(tempDir + "/pubkey3") 109 if !reflect.DeepEqual(pkf.String(), fmt.Sprint(expected)) { 126 pkf := new(PubKeyFilesFlag) [all …]
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/dports/devel/gitlab-runner/gitlab-runner-8925d9a06fd8e452e2161a768462652a2a13111f/vendor/github.com/hashicorp/vault/vault-api-v1.0.4/helper/pgpkeys/ |
H A D | flag_test.go | 60 pkf := new(PubKeyFilesFlag) 61 err = pkf.Set(tempDir + "/pubkey1,@" + tempDir + "/pubkey2") 66 err = pkf.Set(tempDir + "/pubkey3") 72 if !reflect.DeepEqual(pkf.String(), fmt.Sprint(expected)) { 73 t.Fatalf("Bad: %#v", pkf) 97 pkf := new(PubKeyFilesFlag) 98 err = pkf.Set(tempDir + "/pubkey1,@" + tempDir + "/pubkey2") 103 err = pkf.Set(tempDir + "/pubkey3") 109 if !reflect.DeepEqual(pkf.String(), fmt.Sprint(expected)) { 126 pkf := new(PubKeyFilesFlag) [all …]
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/dports/devel/gitlab-runner/vault-sdk-v0.1.13/helper/pgpkeys/ |
H A D | flag_test.go | 60 pkf := new(PubKeyFilesFlag) 61 err = pkf.Set(tempDir + "/pubkey1,@" + tempDir + "/pubkey2") 66 err = pkf.Set(tempDir + "/pubkey3") 72 if !reflect.DeepEqual(pkf.String(), fmt.Sprint(expected)) { 73 t.Fatalf("Bad: %#v", pkf) 97 pkf := new(PubKeyFilesFlag) 98 err = pkf.Set(tempDir + "/pubkey1,@" + tempDir + "/pubkey2") 103 err = pkf.Set(tempDir + "/pubkey3") 109 if !reflect.DeepEqual(pkf.String(), fmt.Sprint(expected)) { 126 pkf := new(PubKeyFilesFlag) [all …]
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/dports/sysutils/istio/vault-sdk-v0.1.12/helper/pgpkeys/ |
H A D | flag_test.go | 60 pkf := new(PubKeyFilesFlag) 61 err = pkf.Set(tempDir + "/pubkey1,@" + tempDir + "/pubkey2") 66 err = pkf.Set(tempDir + "/pubkey3") 72 if !reflect.DeepEqual(pkf.String(), fmt.Sprint(expected)) { 73 t.Fatalf("Bad: %#v", pkf) 97 pkf := new(PubKeyFilesFlag) 98 err = pkf.Set(tempDir + "/pubkey1,@" + tempDir + "/pubkey2") 103 err = pkf.Set(tempDir + "/pubkey3") 109 if !reflect.DeepEqual(pkf.String(), fmt.Sprint(expected)) { 126 pkf := new(PubKeyFilesFlag) [all …]
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/dports/sysutils/istio/istio-1.6.7/vendor/github.com/hashicorp/vault/helper/pgpkeys/ |
H A D | flag_test.go | 60 pkf := new(PubKeyFilesFlag) 61 err = pkf.Set(tempDir + "/pubkey1,@" + tempDir + "/pubkey2") 66 err = pkf.Set(tempDir + "/pubkey3") 72 if !reflect.DeepEqual(pkf.String(), fmt.Sprint(expected)) { 73 t.Fatalf("Bad: %#v", pkf) 97 pkf := new(PubKeyFilesFlag) 98 err = pkf.Set(tempDir + "/pubkey1,@" + tempDir + "/pubkey2") 103 err = pkf.Set(tempDir + "/pubkey3") 109 if !reflect.DeepEqual(pkf.String(), fmt.Sprint(expected)) { 126 pkf := new(PubKeyFilesFlag) [all …]
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/dports/graphics/qgis-ltr/qgis-3.16.16/tests/src/python/ |
H A D | test_qgsauxiliarystorage.py | 90 pkf = vl0.fields().field(vl0.fields().indexOf('pk')) 91 al0 = s0.createAuxiliaryLayer(pkf, vl0) 270 pkf = vl.fields().field(vl.fields().indexOf('pk')) 271 al = s.createAuxiliaryLayer(pkf, vl) 335 pkf = vl.fields().field(vl.fields().indexOf('pk')) 336 al = s.createAuxiliaryLayer(pkf, vl) 372 al = s.createAuxiliaryLayer(pkf, vl) 392 al = s.createAuxiliaryLayer(pkf, vl) 416 al = s.createAuxiliaryLayer(pkf, vl) 496 pkf = field [all …]
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/dports/devel/gitolite2/gitolite-2.3.1/src/ |
H A D | sshkeys-lint | 58 for my $pkf (@pubkeyfiles) { 59 my $fp = fprint($pkf); 60 msg 1, "$pkf appears to be a COPY of $pkf_by_fp{$fp}\n" if $pkf_by_fp{$fp}; 61 $pkf_by_fp{$fp} ||= $pkf; 63 msg 0, "$pkf maps to $fpu\n";
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/dports/science/afni/afni-AFNI_21.3.16/src/ |
H A D | nct.c | 110 double pkf,pkb,qkf,qkb , pgamf,pgamb,qgamf,qgamb ; in tnonc_s2p() local 128 pkf = exp(-dels+k*log(dels)-alng(k+1.0)) ; in tnonc_s2p() 129 pkb = pkf ; in tnonc_s2p() 143 rempois = 1.0 - pkf ; in tnonc_s2p() 145 sum = pkf*pbetaf+delosq2*qkf*qbetaf ; in tnonc_s2p() 152 pkf = pkf*dels/(k+i) ; in tnonc_s2p() 153 ptermf = pkf*pbetaf ; in tnonc_s2p() 161 rempois = rempois - pkf ; in tnonc_s2p()
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/dports/graphics/qgis/qgis-3.22.3/tests/src/python/ |
H A D | test_qgsauxiliarystorage.py | 96 pkf = vl0.fields().field(vl0.fields().indexOf('pk')) 97 al0 = s0.createAuxiliaryLayer(pkf, vl0) 277 al = s.createAuxiliaryLayer(pkf, vl) 342 al = s.createAuxiliaryLayer(pkf, vl) 378 al = s.createAuxiliaryLayer(pkf, vl) 398 al = s.createAuxiliaryLayer(pkf, vl) 456 al = s.createAuxiliaryLayer(pkf, vl) 548 al = s.createAuxiliaryLayer(pkf, vl) 613 al = s.createAuxiliaryLayer(pkf, vl) 693 pkf = field [all …]
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/dports/devel/gitolite/gitolite-3.6.12/src/commands/ |
H A D | sshkeys-lint | 65 for my $pkf (@pubkeyfiles) { 67 ( my $pkfsn = $pkf ) =~ s(^$kd/)(); 69 my $fp = fprint($pkf);
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/dports/security/gnupg/gnupg-2.3.3/tests/migrations/ |
H A D | Makefile.am | 40 extended-pkf.scm \ 44 extended-pkf.tar.asc \
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/dports/science/libgridxc/libgridxc-libgridxc-0.9.6/src/ |
H A D | vv_vdwxc.F90 | 395 real(dp),save :: pkf(nkf,nkf), d2pkfdkf2(nkf,nkf) local 401 pkf(:,ikf) = 0 ! ikf'th polynomial pkf(:,ikf) is one at kfmesh(ikf) 402 pkf(ikf,ikf) = 1 ! and zero at all other points 403 call spline( kfmesh, pkf(:,ikf), nkf, 1.e30_dp, 1.e30_dp, & 418 write(22,'(20e15.6)') kfmesh(ikf), pkf(:,ikf), d2pkfdkf2(:,ikf) 444 pkf0(ikf) = a*pkf(ikf0,ikf) + b*pkf(ikf0+1,ikf) & 447 dpkfdkf0(ikf) = - (pkf(ikf0,ikf) - pkf(ikf0+1,ikf)) / dk &
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