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Searched refs:preAltOption (Results 1 – 2 of 2) sorted by relevance

/dports/biology/gatk/gatk-4.2.0.0/src/test/java/org/broadinstitute/hellbender/tools/walkers/haplotypecaller/graphs/
H A DGraphBasedKBestHaplotypeFinderUnitTest.java272 final String preAltOption = "ATCGATCGATCGATCGATCG"; in testTripleBubbleData() local
279 SeqVertex preV = new SeqVertex(preAltOption); in testTripleBubbleData()
337 expectedCigar.add(new CigarElement(preAltOption.length(), CigarOperator.I)); in testTripleBubbleData()
H A DJunctionTreeKBestHaplotypeFinderUnitTest.java869 final String preAltOption = "ATCGATCGATCGATCGATCG"; in testTripleBubbleData() local
876 SeqVertex preV = new SeqVertex(preAltOption); in testTripleBubbleData()
934 expectedCigar.add(new CigarElement(preAltOption.length(), CigarOperator.I)); in testTripleBubbleData()