| /dports/biology/jalview/jalview/examples/ |
| H A D | uniref50_mz.fa | 1 >FER1_MAIZE/53-118 Ferredoxin-1, chloroplast precursor
5 >FER_CAPAN/48-113 Ferredoxin, chloroplast precursor
7 >FER1_SOLLC/48-113 Ferredoxin-1, chloroplast precursor
9 >Q93XJ9_SOLTU/48-113 Ferredoxin I precursor
11 >FER1_PEA/53-118 Ferredoxin-1, chloroplast precursor
15 >FER1_MESCR/52-117 Ferredoxin-1, chloroplast precursor
17 >FER1_SPIOL/51-116 Ferredoxin-1, chloroplast precursor
21 >FER2_ARATH/53-118 Ferredoxin-1, chloroplast precursor
25 >FER1_ARATH/53-118 Ferredoxin-2, chloroplast precursor
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| H A D | jpred_msa.fasta | 4 >FER_CAPAN Ferredoxin, chloroplast precursor
7 >FER1_SOLLC Ferredoxin-1, chloroplast precursor
10 >Q93XJ9_SOLTU Ferredoxin I precursor
13 >FER1_MESCR Ferredoxin-1, chloroplast precursor
16 >FER1_SPIOL Ferredoxin-1, chloroplast precursor
19 >FER1_ARATH Ferredoxin-1, chloroplast precursor
22 >FER2_ARATH Ferredoxin-2, chloroplast precursor
25 >FER1_PEA Ferredoxin-1, chloroplast precursor
31 >FER1_MAIZE Ferredoxin-1, chloroplast precursor
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| H A D | uniref50.fa | 5 >FER_CAPAN Ferredoxin, chloroplast precursor
9 >FER1_SOLLC Ferredoxin-1, chloroplast precursor
13 >Q93XJ9_SOLTU Ferredoxin I precursor
17 >FER1_PEA Ferredoxin-1, chloroplast precursor
25 >FER1_MESCR Ferredoxin-1, chloroplast precursor
29 >FER1_SPIOL Ferredoxin-1, chloroplast precursor
37 >FER2_ARATH Ferredoxin-2, chloroplast precursor
45 >FER1_ARATH Ferredoxin-1, chloroplast precursor
53 >FER1_MAIZE Ferredoxin-1, chloroplast precursor
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| /dports/biology/jalview/jalview/examples/testdata/ |
| H A D | test.amsa | 5 >FER_CAPAN Ferredoxin, chloroplast precursor
9 >FER1_SOLLC Ferredoxin-1, chloroplast precursor
13 >Q93XJ9_SOLTU Ferredoxin I precursor
17 >FER1_PEA Ferredoxin-1, chloroplast precursor
25 >FER1_MESCR Ferredoxin-1, chloroplast precursor
29 >FER1_SPIOL Ferredoxin-1, chloroplast precursor
37 >FER1_ARATH Ferredoxin-1, chloroplast precursor
45 >FER2_ARATH Ferredoxin-2, chloroplast precursor
53 >FER1_MAIZE Ferredoxin-1, chloroplast precursor
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| H A D | test.pir | 7 Ferredoxin, chloroplast precursor
12 Ferredoxin-1, chloroplast precursor
17 Ferredoxin I precursor
22 Ferredoxin-1, chloroplast precursor
32 Ferredoxin-1, chloroplast precursor
37 Ferredoxin-1, chloroplast precursor
47 Ferredoxin-1, chloroplast precursor
57 Ferredoxin-2, chloroplast precursor
67 Ferredoxin-1, chloroplast precursor
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| H A D | test.blc | 2 >FER_CAPAN/1-144 Ferredoxin, chloroplast precursor
3 >FER1_SOLLC/1-144 Ferredoxin-1, chloroplast precursor
4 >Q93XJ9_SOLTU/1-144 Ferredoxin I precursor
5 >FER1_PEA/1-149 Ferredoxin-1, chloroplast precursor
7 >FER1_MESCR/1-148 Ferredoxin-1, chloroplast precursor
8 >FER1_SPIOL/1-147 Ferredoxin-1, chloroplast precursor
10 >FER1_ARATH/1-148 Ferredoxin-1, chloroplast precursor
12 >FER2_ARATH/1-148 Ferredoxin-2, chloroplast precursor
14 >FER1_MAIZE/1-150 Ferredoxin-1, chloroplast precursor
|
| /dports/security/afterglow/afterglow/src/perl/loganalysis/ |
| H A D | capper.pl | 88 foreach my $precursor (@all_activity) {
89 $score{$user.",".$precursor_bucket{$precursor}}+=$precursor_score{$precursor};
90 $buckets{$precursor_bucket{$precursor}}=1;
98 foreach my $precursor (@all_activity) {
108 my $pscore=$precursor_score{$precursor};
113 print "$user,$precursor,$total,$pscore,".$precursor_bucket{$precursor};
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| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/objtools/writers/unit_test/gtfwriter_test_cases/ |
| H A D | rw-172.annot.gtf | 12 …CDS"; gene "Tmx1"; product "thioredoxin-related transmembrane protein 1 precursor"; protein_id "NP…
13 …CDS"; gene "Tmx1"; product "thioredoxin-related transmembrane protein 1 precursor"; protein_id "NP…
14 …CDS"; gene "Tmx1"; product "thioredoxin-related transmembrane protein 1 precursor"; protein_id "NP…
15 …CDS"; gene "Tmx1"; product "thioredoxin-related transmembrane protein 1 precursor"; protein_id "NP…
16 …CDS"; gene "Tmx1"; product "thioredoxin-related transmembrane protein 1 precursor"; protein_id "NP…
17 …CDS"; gene "Tmx1"; product "thioredoxin-related transmembrane protein 1 precursor"; protein_id "NP…
18 …CDS"; gene "Tmx1"; product "thioredoxin-related transmembrane protein 1 precursor"; protein_id "NP…
19 …CDS"; gene "Tmx1"; product "thioredoxin-related transmembrane protein 1 precursor"; protein_id "NP…
20 …CDS"; gene "Tmx1"; product "thioredoxin-related transmembrane protein 1 precursor"; protein_id "NP…
21 …CDS"; gene "Tmx1"; product "thioredoxin-related transmembrane protein 1 precursor"; protein_id "NP…
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| /dports/news/golded+/golded-plus/golded+/goldlib/gcui/ |
| H A D | gwinpick.cpp | 351 void gwinpick::precursor() {} in precursor() function in gwinpick
365 case Key_Up: precursor(); cursor_up(); break; in default_handle_key()
366 case Key_Dwn: precursor(); cursor_down(); break; in default_handle_key()
367 case Key_PgUp: precursor(); cursor_pageup(); break; in default_handle_key()
368 case Key_PgDn: precursor(); cursor_pagedown(); break; in default_handle_key()
369 case Key_Home: precursor(); cursor_first(); break; in default_handle_key()
370 case Key_End: precursor(); cursor_last(); break; in default_handle_key()
371 case Key_C_Up: precursor(); cursor_scroll_up(); break; in default_handle_key()
372 case Key_C_Dwn: precursor(); cursor_scroll_down(); break; in default_handle_key()
|
| /dports/databases/db18/db-18.1.40/test/tcl/ |
| H A D | test072.tcl | 91 set precursor [eval {$db cursor} $txn]
92 error_check_good precursor [is_valid_cursor $precursor \
97 error_check_good preset [$precursor get -set $prekey] \
146 set pre_dbt [$precursor get -current]
218 set pre_dbt [$precursor get -current]
251 error_check_good precursor_close [$precursor close] 0
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| /dports/databases/db5/db-5.3.28/test/tcl/ |
| H A D | test072.tcl | 91 set precursor [eval {$db cursor} $txn]
92 error_check_good precursor [is_valid_cursor $precursor \
97 error_check_good preset [$precursor get -set $prekey] \
146 set pre_dbt [$precursor get -current]
218 set pre_dbt [$precursor get -current]
251 error_check_good precursor_close [$precursor close] 0
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| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/algo/ms/omssa/ |
| H A D | SpectrumSet.cpp | 286 double precursor(0.0L); in GetDTAHeader() local
288 if(!(DTA >> precursor) || precursor < 0) { in GetDTAHeader()
307 precursor = (precursor + (dummy - 1)*kProton ) / fabs(dummy); in GetDTAHeader()
309 MySpectrum->SetPrecursormz(MSSCALE2INT(precursor)); in GetDTAHeader()
502 double precursor; in GetMGFBlock() local
503 if(istr >> precursor) { in GetMGFBlock()
504 MySpectrum->SetPrecursormz(MSSCALE2INT(precursor)); in GetMGFBlock()
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| /dports/biology/emboss/EMBOSS-6.6.0/test/data/ |
| H A D | memeseqs.dat | 6 >LACB_BOVIN P02754 Beta-lactoglobulin precursor (Beta-LG) (Allergen Bos d 5).
10 >BBP_PIEBR P09464 Bilin-binding protein precursor (BBP).
20 >MUP2_MOUSE P11589 Major urinary protein 2 precursor (MUP 2).
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| H A D | emrod | 57 >M11903 M11903.1 Rattus norvegicus androgen-responsive protein precursor (Svf) gene, exons 1 and 1A…
71 >M11904 M11904.1 Rattus norvegicus androgen-responsive protein precursor (Svf) gene, exon 2 and com…
82 >M11905 M11905.1 Rattus norvegicus androgen-responsive protein precursor (Svf) gene, exon 3.
|
| /dports/science/R-cran-Epi/Epi/man/ |
| H A D | cutLexis.Rd | 22 precursor.states = transient(data),
42 \item{precursor.states}{an optional vector of states to be considered
47 \code{precursor.states} will be ignored. }
107 \code{precursor.states=c(Y,Z)} then any exit status of \code{Y} or
144 cutLexis(xx, cut, new.state=3, precursor=1)
145 cutLexis(xx, cut, new.state=3, precursor=2)
146 cutLexis(xx, cut, new.state=3, precursor=1:2)
158 cutLexis(yy,c(33,47,29,50),precursor="alpha",new.state="gamma")
165 cutLexis( xx, rl, precursor=1 )
166 cutLexis( xx, rl, precursor=0:2 )
[all …]
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| H A D | mcutLexis.Rd | 13 precursor.states = transient(L0),
26 \item{precursor.states}{Which states are precursor states. See
27 \code{\link{cutLexis}} for definition of precursor states.}
90 precursor.states = "OK",
104 precursor.states = "OK",
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| /dports/devel/py-hg-evolve/hg-evolve-10.4.1/tests/ |
| H A D | test-evolve-list.t | 40 phase-divergent: cb9a9f314b8b (immutable precursor)
70 content-divergent: a922b3733e98 (draft) (precursor d2ae7f538514)
73 content-divergent: c882616e9d84 (draft) (precursor d2ae7f538514)
77 content-divergent: a922b3733e98 (draft) (precursor d2ae7f538514)
82 content-divergent: a922b3733e98 (public) (precursor d2ae7f538514)
|
| /dports/lang/nim/nim-1.6.2/tests/template/ |
| H A D | annotate.nim | 44 # Create a precursor indent as-needed
45 var precursor = newString(0)
47 precursor.add(' ')
55 result.add(precursor)
|
| /dports/net/ns3/ns-allinone-3.35/ns-3.35/src/mesh/model/dot11s/ |
| H A D | hwmp-rtable.cc | 94 Precursor precursor; in AddPrecursor() local
95 precursor.interface = precursorInterface; in AddPrecursor()
96 precursor.address = precursorAddress; in AddPrecursor()
97 precursor.whenExpire = Simulator::Now () + lifetime; in AddPrecursor()
109 i->second.precursors[j].whenExpire = precursor.whenExpire; in AddPrecursor()
115 i->second.precursors.push_back (precursor); in AddPrecursor()
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| /dports/biology/emboss/EMBOSS-6.6.0/doc/programs/master/emboss/apps/inc/ |
| H A D | seqretsplit.output | 7 >M11903 M11903.1 Rattus norvegicus androgen-responsive protein precursor (Svf) gene, exons 1 and…
26 >M11904 M11904.1 Rattus norvegicus androgen-responsive protein precursor (Svf) gene, exon 2 and …
42 >M11905 M11905.1 Rattus norvegicus androgen-responsive protein precursor (Svf) gene, exon 3.
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| /dports/biology/jalview/jalview/src/jalview/xml/binding/uniprot/ |
| H A D | SequenceType.java | 70 protected Boolean precursor; field in SequenceType
203 return precursor; in isPrecursor()
215 this.precursor = value; in setPrecursor()
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| /dports/audio/praat/praat-6.2.03/dwtools/ |
| H A D | espeakdata_FileInMemory.cpp | 89 …ng32 get_wordAfterPrecursor_u8 (constvector<unsigned char> const& text8, conststring32 precursor) { in get_wordAfterPrecursor_u8() argument
97 MelderString_append (& regex, U"^\\s*", precursor, U"\\s+"); in get_wordAfterPrecursor_u8()
101 pmatch += str32len (precursor); // skip 'precursor' in get_wordAfterPrecursor_u8()
114 …32 get_stringAfterPrecursor_u8 (constvector<unsigned char> const& text8, conststring32 precursor) { in get_stringAfterPrecursor_u8() argument
122 MelderString_append (& regex, U"^\\s*", precursor, U"\\s+"); in get_stringAfterPrecursor_u8()
126 pmatch += str32len (precursor); // skip 'precursor' in get_stringAfterPrecursor_u8()
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| /dports/www/interchange/interchange-5.6.3/lib/Vend/Options/ |
| H A D | Matrix.pm | 236 my $precursor = '';
237 $precursor = "$ref->[SEP_GROUP]$opt->{separator}" if $opt->{report};
238 …$precursor = qq{<input type="hidden" name="mv_item_option" value="$ref->[SEP_GROUP]">} if $ref->[S…
241 push @out, $precursor . Vend::Interpolate::tag_accessories(
263 push @out, $precursor . Vend::Interpolate::tag_accessories(
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| /dports/www/qt5-webengine/qtwebengine-everywhere-src-5.15.2/src/3rdparty/chromium/url/ |
| H A D | origin.cc | 93 SchemeHostPort precursor(precursor_scheme.as_string(), in UnsafelyCreateOpaqueOriginWithoutNormalization() local
99 if (!precursor.IsValid() && in UnsafelyCreateOpaqueOriginWithoutNormalization()
104 return Origin(std::move(nonce), std::move(precursor)); in UnsafelyCreateOpaqueOriginWithoutNormalization()
124 SchemeHostPort precursor(std::move(precursor_scheme), in CreateOpaqueFromNormalizedPrecursorTuple() local
128 return Origin(std::move(nonce), std::move(precursor)); in CreateOpaqueFromNormalizedPrecursorTuple()
278 Origin::Origin(const Nonce& nonce, SchemeHostPort precursor) in Origin() argument
279 : tuple_(std::move(precursor)), nonce_(std::move(nonce)) { in Origin()
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| /dports/www/chromium-legacy/chromium-88.0.4324.182/url/ |
| H A D | origin.cc | 92 SchemeHostPort precursor(precursor_scheme.as_string(), in UnsafelyCreateOpaqueOriginWithoutNormalization() local
98 if (!precursor.IsValid() && in UnsafelyCreateOpaqueOriginWithoutNormalization()
103 return Origin(std::move(nonce), std::move(precursor)); in UnsafelyCreateOpaqueOriginWithoutNormalization()
123 SchemeHostPort precursor(std::move(precursor_scheme), in CreateOpaqueFromNormalizedPrecursorTuple() local
127 return Origin(std::move(nonce), std::move(precursor)); in CreateOpaqueFromNormalizedPrecursorTuple()
281 Origin::Origin(const Nonce& nonce, SchemeHostPort precursor) in Origin() argument
282 : tuple_(std::move(precursor)), nonce_(std::move(nonce)) { in Origin()
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