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Searched refs:previous_qname (Results 1 – 3 of 3) sorted by relevance

/dports/biology/velvet/velvet_1.2.10/contrib/MetaVelvet-1.2.01/Velvet-1.1.06/
H A DreadSet.c840 char previous_qname[5000]; in readSAMFile() local
930 } else if (strcmp(qname, previous_qname) == 0) { in readSAMFile()
983 strcpy(previous_qname, qname); in readSAMFile()
1000 velvetFprintf(outfile, ">%s%s\t%ld\t%d\n", previous_qname, previous_qname_pairing, in readSAMFile()
1005 velvetFprintf(outfile, ">%s%s\t%ld\t%d\n", previous_qname, previous_qname_pairing, in readSAMFile()
1011 velvetFprintf(outfile, ">%s%s\t%ld\t%d\n", previous_qname, previous_qname_pairing, in readSAMFile()
1075 char previous_qname[5000]; in readBAMFile() local
1218 } else if (strcmp(qname, previous_qname) == 0) { in readBAMFile()
1271 strcpy(previous_qname, qname); in readBAMFile()
1289 velvetFprintf(outfile, ">%s%s\t%ld\t%d\n", previous_qname, previous_qname_pairing, in readBAMFile()
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/dports/biology/velvet/velvet_1.2.10/contrib/MetaVelvet-v0.3.1/src/
H A DreadSet.c867 char previous_qname[5000]; in readSAMFile() local
921 } else if (strcmp(qname, previous_qname) == 0) { in readSAMFile()
942 strcpy(previous_qname, qname); in readSAMFile()
955 fprintf(outfile, ">%s%s\t%ld\t%d\n", previous_qname, previous_qname_pairing, in readSAMFile()
960 fprintf(outfile, ">%s%s\t%ld\t%d\n", previous_qname, previous_qname_pairing, in readSAMFile()
966 fprintf(outfile, ">%s%s\t%ld\t%d\n", previous_qname, previous_qname_pairing, in readSAMFile()
996 char previous_qname[5000]; in readBAMFile() local
1085 } else if (strcmp(qname, previous_qname) == 0) { in readBAMFile()
1106 strcpy(previous_qname, qname); in readBAMFile()
1119 fprintf(outfile, ">%s%s\t%ld\t%d\n", previous_qname, previous_qname_pairing, in readBAMFile()
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/dports/biology/velvet/velvet_1.2.10/src/
H A DreadSet.c771 sprintf(print_qname, ">%s%s", previous_qname, previous_qname_pairing); in writeMappedSequence()
775 velvetFprintf(seqWriteInfo->m_pFile, ">%s%s\t%ld\t%d\n", previous_qname, previous_qname_pairing, in writeMappedSequence()
821 char previous_qname[5000]; in readSAMFile() local
852 strcpy(previous_qname, ""); in readSAMFile()
904 boolean same_name = (strcmp(qname, previous_qname) == 0); in readSAMFile()
921 strcpy(previous_qname, qname); in readSAMFile()
936 …writeMappedSequence(sequenceIndex, apparentCat, prev_cat, previous_seq, previous_qname, previous_q… in readSAMFile()
966 char previous_qname[5000]; in readBAMFile() local
1034 strcpy(previous_qname, ""); in readBAMFile()
1102 boolean same_name = (strcmp(qname, previous_qname) == 0); in readBAMFile()
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