Searched refs:previous_qname_pairing (Results 1 – 3 of 3) sorted by relevance
| /dports/biology/velvet/velvet_1.2.10/contrib/MetaVelvet-1.2.01/Velvet-1.1.06/ |
| H A D | readSet.c | 839 char previous_qname_pairing[10]; in readSAMFile() local
984 strcpy(previous_qname_pairing, qname_pairing); in readSAMFile()
1000 velvetFprintf(outfile, ">%s%s\t%ld\t%d\n", previous_qname, previous_qname_pairing, in readSAMFile()
1005 velvetFprintf(outfile, ">%s%s\t%ld\t%d\n", previous_qname, previous_qname_pairing, in readSAMFile()
1011 velvetFprintf(outfile, ">%s%s\t%ld\t%d\n", previous_qname, previous_qname_pairing, in readSAMFile()
1074 char previous_qname_pairing[10]; in readBAMFile() local
1233 velvetFprintf(outfile, ">%s%s\t%ld\t%d\n", previous_qname, previous_qname_pairing, in readBAMFile()
1272 strcpy(previous_qname_pairing, qname_pairing); in readBAMFile()
1289 velvetFprintf(outfile, ">%s%s\t%ld\t%d\n", previous_qname, previous_qname_pairing, in readBAMFile()
1294 velvetFprintf(outfile, ">%s%s\t%ld\t%d\n", previous_qname, previous_qname_pairing, in readBAMFile()
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| /dports/biology/velvet/velvet_1.2.10/contrib/MetaVelvet-v0.3.1/src/ |
| H A D | readSet.c | 866 char previous_qname_pairing[10]; in readSAMFile() local
943 strcpy(previous_qname_pairing, qname_pairing); in readSAMFile()
955 fprintf(outfile, ">%s%s\t%ld\t%d\n", previous_qname, previous_qname_pairing, in readSAMFile()
960 fprintf(outfile, ">%s%s\t%ld\t%d\n", previous_qname, previous_qname_pairing, in readSAMFile()
966 fprintf(outfile, ">%s%s\t%ld\t%d\n", previous_qname, previous_qname_pairing, in readSAMFile()
995 char previous_qname_pairing[10]; in readBAMFile() local
1100 fprintf(outfile, ">%s%s\t%ld\t%d\n", previous_qname, previous_qname_pairing, in readBAMFile()
1107 strcpy(previous_qname_pairing, qname_pairing); in readBAMFile()
1119 fprintf(outfile, ">%s%s\t%ld\t%d\n", previous_qname, previous_qname_pairing, in readBAMFile()
1124 fprintf(outfile, ">%s%s\t%ld\t%d\n", previous_qname, previous_qname_pairing, in readBAMFile()
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| /dports/biology/velvet/velvet_1.2.10/src/ |
| H A D | readSet.c | 771 sprintf(print_qname, ">%s%s", previous_qname, previous_qname_pairing); in writeMappedSequence()
775 velvetFprintf(seqWriteInfo->m_pFile, ">%s%s\t%ld\t%d\n", previous_qname, previous_qname_pairing, in writeMappedSequence()
820 char previous_qname_pairing[10]; in readSAMFile() local
905 if (readCount && (!same_name || strcmp(qname_pairing, previous_qname_pairing) != 0)) { in readSAMFile()
913 …uenceIndex, apparentCat, prev_cat, previous_seq, previous_qname, previous_qname_pairing, buffer, s… in readSAMFile()
922 strcpy(previous_qname_pairing, qname_pairing); in readSAMFile()
936 …uenceIndex, apparentCat, prev_cat, previous_seq, previous_qname, previous_qname_pairing, buffer, s… in readSAMFile()
965 char previous_qname_pairing[10]; in readBAMFile() local
1103 if (readCount > 0 && (!same_name || strcmp(qname_pairing, previous_qname_pairing) != 0)) { in readBAMFile()
1119 strcpy(previous_qname_pairing, qname_pairing); in readBAMFile()
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