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Searched refs:q_ve (Results 1 – 8 of 8) sorted by relevance

/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/algo/blast/igblast/
H A Digblast.cpp873 int q_ve, in x_FindDJAln() argument
954 …if (q_ms) keep = (q_de >= q_ve - max_allowed_VD_distance && q_ds <= q_ve - m_IgOptions->m_Min_D_ma… in x_FindDJAln()
955 …else keep = (q_ds <= q_ve + max_allowed_VD_distance && q_de >= q_ve + m_IgOptions->m_Min_D_ma… in x_FindDJAln()
1002 … if (q_je < q_ve - allowed_VJ_distance || q_js > q_ve - j_wordsize) keep = false; in x_FindDJAln()
1004 if (q_js > q_ve + allowed_VJ_distance || q_je < q_ve + j_wordsize) keep = false; in x_FindDJAln()
1073 int q_ve, in x_FindDJ() argument
1098 x_FindDJAln(align_D, align_J, q_ct, q_ms, q_st, q_ve, iq, false); in x_FindDJ()
1210 int q_ve = (q_ms) ? (*annot)->m_GeneInfo[0] : (*annot)->m_GeneInfo[1] - 1; in x_ProcessDGeneResult() local
1276 …if (q_ms) keep = (q_de >= q_ve - max_allowed_VD_distance && q_ds <= q_ve - m_IgOptions->m_Min_D_ma… in x_ProcessDGeneResult()
1277 …else keep = (q_ds <= q_ve + max_allowed_VD_distance && q_de >= q_ve + m_IgOptions->m_Min_D_ma… in x_ProcessDGeneResult()
[all …]
/dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/src/algo/blast/igblast/
H A Digblast.cpp873 int q_ve, in x_FindDJAln() argument
954 …if (q_ms) keep = (q_de >= q_ve - max_allowed_VD_distance && q_ds <= q_ve - m_IgOptions->m_Min_D_ma… in x_FindDJAln()
955 …else keep = (q_ds <= q_ve + max_allowed_VD_distance && q_de >= q_ve + m_IgOptions->m_Min_D_ma… in x_FindDJAln()
1002 … if (q_je < q_ve - allowed_VJ_distance || q_js > q_ve - j_wordsize) keep = false; in x_FindDJAln()
1004 if (q_js > q_ve + allowed_VJ_distance || q_je < q_ve + j_wordsize) keep = false; in x_FindDJAln()
1073 int q_ve, in x_FindDJ() argument
1098 x_FindDJAln(align_D, align_J, q_ct, q_ms, q_st, q_ve, iq, false); in x_FindDJ()
1210 int q_ve = (q_ms) ? (*annot)->m_GeneInfo[0] : (*annot)->m_GeneInfo[1] - 1; in x_ProcessDGeneResult() local
1276 …if (q_ms) keep = (q_de >= q_ve - max_allowed_VD_distance && q_ds <= q_ve - m_IgOptions->m_Min_D_ma… in x_ProcessDGeneResult()
1277 …else keep = (q_ds <= q_ve + max_allowed_VD_distance && q_de >= q_ve + m_IgOptions->m_Min_D_ma… in x_ProcessDGeneResult()
[all …]
/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/include/algo/blast/igblast/
H A Digblast.hpp372 int q_ve,
380 int q_ve,
/dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/include/algo/blast/igblast/
H A Digblast.hpp372 int q_ve,
380 int q_ve,
/dports/textproc/wiggle/wiggle-1.3/tests/contrib/series/
H A Dmerge12853 patches.suse/i40e-i40evf-Record-ITR-register-location-in-the-q_ve.patch
H A Dorig12853 patches.suse/i40e-i40evf-Record-ITR-register-location-in-the-q_ve.patch
H A Dldiff12864 - patches.suse/i40e-i40evf-Record-ITR-register-location-in-the-q_ve.patch
H A Ddiff12857 | <<<--patches.suse/i40e-i40evf-Record-ITR-register-location-in-the-q_ve.patch-->>><<<++patches.sus…