Home
last modified time | relevance | path

Searched refs:qcsa (Results 1 – 6 of 6) sorted by relevance

/dports/biology/emboss/EMBOSS-6.6.0/ajax/ensembl/
H A Densqcsequence.c302 qcs->Adaptor = qcsa; in ensQcsequenceNewIni()
833 qcs->Adaptor = qcsa; in ensQcsequenceSetAdaptor()
2030 AJNEW0(qcsa); in ensQcsequenceadaptorNew()
2041 return qcsa; in ensQcsequenceadaptorNew()
2154 return (qcsa) ? qcsa->Adaptor : NULL; in ensQcsequenceadaptorGetBaseadaptor()
2252 if (!qcsa) in ensQcsequenceadaptorFetchAllbyQcdatabase()
2319 if (!qcsa) in ensQcsequenceadaptorFetchByAccession()
2455 if (!qcsa) in ensQcsequenceadaptorFetchByName()
2570 if (!qcsa) in ensQcsequenceadaptorDelete()
2637 if (!qcsa) in ensQcsequenceadaptorStore()
[all …]
H A Densqcsequence.h186 AjBool ensQcsequenceSetAdaptor(EnsPQcsequence qcs, EnsPQcsequenceadaptor qcsa);
245 EnsPQcsequenceadaptor qcsa);
248 EnsPQcsequenceadaptor qcsa);
250 AjBool ensQcsequenceadaptorFetchByAccession(EnsPQcsequenceadaptor qcsa,
260 AjBool ensQcsequenceadaptorFetchByName(EnsPQcsequenceadaptor qcsa,
265 AjBool ensQcsequenceadaptorFetchAllbyQcdatabase(EnsPQcsequenceadaptor qcsa,
269 AjBool ensQcsequenceadaptorStore(EnsPQcsequenceadaptor qcsa,
272 AjBool ensQcsequenceadaptorDelete(EnsPQcsequenceadaptor qcsa,
275 AjBool ensQcsequenceadaptorUpdate(EnsPQcsequenceadaptor qcsa,
H A Densqcsubmission.c1283 EnsPQcsequenceadaptor qcsa = NULL; in qcsubmissionadaptorFetchAllbyStatement() local
1313 qcsa = ensRegistryGetQcsequenceadaptor(dba); in qcsubmissionadaptorFetchAllbyStatement()
1348 ensQcsequenceadaptorFetchByIdentifier(qcsa, qsid, &qsequence); in qcsubmissionadaptorFetchAllbyStatement()
1350 ensQcsequenceadaptorFetchByIdentifier(qcsa, tsid, &tsequence); in qcsubmissionadaptorFetchAllbyStatement()
H A Densqcdasfeature.c1759 EnsPQcsequenceadaptor qcsa = NULL; in qcdasfeatureadaptorFetchAllbyStatement() local
1788 qcsa = ensRegistryGetQcsequenceadaptor(dba); in qcdasfeatureadaptorFetchAllbyStatement()
1832 ensQcsequenceadaptorFetchByIdentifier(qcsa, qsid, &qsequence); in qcdasfeatureadaptorFetchAllbyStatement()
1834 ensQcsequenceadaptorFetchByIdentifier(qcsa, tsid, &tsequence); in qcdasfeatureadaptorFetchAllbyStatement()
H A Densqcvariation.c1978 EnsPQcsequenceadaptor qcsa = NULL; in qcvariationadaptorFetchAllbyStatement() local
2010 qcsa = ensRegistryGetQcsequenceadaptor(dba); in qcvariationadaptorFetchAllbyStatement()
2058 ensQcsequenceadaptorFetchByIdentifier(qcsa, qsid, &qsequence); in qcvariationadaptorFetchAllbyStatement()
2059 ensQcsequenceadaptorFetchByIdentifier(qcsa, tsid, &tsequence); in qcvariationadaptorFetchAllbyStatement()
H A Densqcalignment.c3259 EnsPQcsequenceadaptor qcsa = NULL; in qcalignmentadaptorFetchAllbyStatement() local
3287 qcsa = ensRegistryGetQcsequenceadaptor(dba); in qcalignmentadaptorFetchAllbyStatement()
3335 ensQcsequenceadaptorFetchByIdentifier(qcsa, qsid, &qsequence); in qcalignmentadaptorFetchAllbyStatement()
3337 ensQcsequenceadaptorFetchByIdentifier(qcsa, tsid, &tsequence); in qcalignmentadaptorFetchAllbyStatement()