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Searched refs:qual4 (Results 1 – 25 of 47) sorted by relevance

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/dports/databases/opentsdb/opentsdb-2.3.0/test/tools/
H A DTestFsck.java2539 final byte[] qual4 = { 0x0, 0x30 }; in twoCompactedColumnsWSameTS()
2570 final byte[] qual4 = { 0x0, 0x30 }; in twoCompactedColumnsWSameTSFix()
2661 final byte[] qual4 = { 0x0, 0x30 }; in twoCompactedColumnsWSameTSLWW()
2694 final byte[] qual4 = { 0x0, 0x30 }; in twoCompactedColumnsWSameTSFixLLW()
2850 final byte[] qual4 = { 0x0, 0x30 }; in twoCompactedPlusSingleWSameTS()
2886 final byte[] qual4 = { 0x0, 0x30 }; in twoCompactedPlusSingleWSameTSFix()
2923 final byte[] qual4 = { 0x0, 0x30 }; in twoCompactedPlusSingleWSameTSLWW()
2960 final byte[] qual4 = { 0x0, 0x30 }; in twoCompactedPlusSingleWSameTSLWWFix()
2994 final byte[] qual4 = { 0x0, 0x30 }; in compactedAndSingleWSameTS()
3022 final byte[] qual4 = { 0x0, 0x30 }; in compactedAndSingleWSameTSFix()
[all …]
/dports/biology/sra-tools/sra-tools-2.11.0/ncbi-vdb/libs/sraxf/
H A Dqual4_encode.c48 const qual4 src [], in qual4_encode()
54 static const qual4 all_bad = { -5, -5, -5, -5 }; in qual4_encode()
58 qual4 in qual4_encode()
62 qual4 is_good; in qual4_encode()
72 qual4 in_val; in qual4_encode()
73 qual4 out_val; in qual4_encode()
199 (const qual4 *)src, in qual4_encode_func()
H A Dqual4_decode.c46 qual4 *dst, in qual4_decode()
58 static const qual4 all_bad = { -5, -5, -5, -5 }; in qual4_decode()
60 qual4 is_good; in qual4_decode()
H A Dqual4_codec.h27 typedef int8_t qual4[4]; typedef
/dports/biology/ncbi-vdb/ncbi-vdb-2.11.0/libs/sraxf/
H A Dqual4_encode.c48 const qual4 src [], in qual4_encode()
54 static const qual4 all_bad = { -5, -5, -5, -5 }; in qual4_encode()
58 qual4 in qual4_encode()
62 qual4 is_good; in qual4_encode()
72 qual4 in_val; in qual4_encode()
73 qual4 out_val; in qual4_encode()
199 (const qual4 *)src, in qual4_encode_func()
H A Dqual4_decode.c46 qual4 *dst, in qual4_decode()
58 static const qual4 all_bad = { -5, -5, -5, -5 }; in qual4_decode()
60 qual4 is_good; in qual4_decode()
H A Dqual4_codec.h27 typedef int8_t qual4[4]; typedef
/dports/databases/opentsdb/opentsdb-2.3.0/test/core/
H A DTestRowSeq.java136 final byte[] qual4 = { 0x00, 0x47 }; in addRowMergeLater()
168 final byte[] qual4 = { 0x00, 0x47 }; in addRowMergeLaterSalted()
201 final byte[] qual4 = { 0x00, 0x27 }; in addRowMergeEarlier()
233 final byte[] qual4 = { 0x00, 0x27 }; in addRowMergeEarlierSalted()
266 final byte[] qual4 = { 0x00, 0x67 }; in addRowMergeMiddle()
310 final byte[] qual4 = { 0x00, 0x67 }; in addRowMergeMiddleSalted()
356 final byte[] qual4 = { 0x00, 0x47 }; in addRowMergeDuplicateLater()
375 final byte[] qual4 = { 0x00, 0x27 }; in addRowMergeDuplicateEarlier()
415 final byte[] qual4 = { 0x00, 0x47 }; in addRowDiffBaseTime()
438 final byte[] qual4 = { 0x00, 0x47 }; in addRowDiffBaseTimeSalt()
[all …]
H A DTestCompactionQueue.java1089 final byte[] qual4 = { 0x00, 0x47 }; in tripleCompacted()
1132 final byte[] qual4 = { 0x00, 0x47 }; in tripleCompactedOutOfOrder()
1215 final byte[] qual4 = { 0x00, 0x37 }; in appendsAndLaterPuts()
1220 kvs.add(makekv(qual4, val4)); in appendsAndLaterPuts()
1244 final byte[] qual4 = { 0x00, 0x37 }; in appendsAndEarlierPuts()
1273 final byte[] qual4 = { 0x00, 0x37 }; in appendsAndInterspersedPuts()
1302 final byte[] qual4 = { 0x00, 0x37 }; in doubleAppends()
1331 final byte[] qual4 = { 0x00, 0x37 }; in tripleAppends()
1366 final byte[] qual4 = { 0x00, 0x37 }; in doubleAppendsAndPuts()
1375 kvs.add(makekv(qual4, val4)); in doubleAppendsAndPuts()
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H A DTestTsdbQueryQueries.java1189 final byte[] qual4 = { 0x00, 0x47 }; in runMultiCompact()
1208 MockBase.concatByteArrays(qual3, qual4), in runMultiCompact()
1244 final byte[] qual4 = { 0x00, 0x47 }; in runMultiCompactAndSingles()
1263 storage.addColumn(key, qual4, val4); in runMultiCompactAndSingles()
/dports/biology/sra-tools/sra-tools-2.11.0/ncbi-vdb/interfaces/sra/
H A Dillumina.vschema40 typedef INSDC:quality:log_odds NCBI:qual4 [ 4 ];
41 typedef NCBI:qual4 NCBI:SRA:rotated_qual4, NCBI:SRA:swapped_qual4;
57 * NCBI:SRA:Illumina:qual4
71 readonly column NCBI:qual4 QUALITY = out_qual4;
73 NCBI:qual4 out_qual4
74 = < NCBI:qual4 > NCBI:SRA:swap ( out_qual4_swapped, read_unpack )
180 table NCBI:SRA:Illumina:qual4 #3
187 extern column NCBI:qual4 QUALITY = out_qual4;
193 NCBI:qual4 out_qual4
199 NCBI:qual4 in_stats_qual = in_qual4;
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H A Dillumina.h63 bool read, bool qual1, bool qual4,
/dports/biology/ncbi-vdb/ncbi-vdb-2.11.0/interfaces/sra/
H A Dillumina.vschema40 typedef INSDC:quality:log_odds NCBI:qual4 [ 4 ];
41 typedef NCBI:qual4 NCBI:SRA:rotated_qual4, NCBI:SRA:swapped_qual4;
57 * NCBI:SRA:Illumina:qual4
71 readonly column NCBI:qual4 QUALITY = out_qual4;
73 NCBI:qual4 out_qual4
74 = < NCBI:qual4 > NCBI:SRA:swap ( out_qual4_swapped, read_unpack )
180 table NCBI:SRA:Illumina:qual4 #3
187 extern column NCBI:qual4 QUALITY = out_qual4;
193 NCBI:qual4 out_qual4
199 NCBI:qual4 in_stats_qual = in_qual4;
[all …]
H A Dillumina.h63 bool read, bool qual1, bool qual4,
/dports/biology/sra-tools/sra-tools-2.11.0/ncbi-vdb/libs/sra/
H A Dreader-illumina.c82 const signed char** qual4; member
91 rc_t IlluminaReaderInit(const IlluminaReader* self, bool read, bool qual1, bool qual4, bool intensi… in IlluminaReaderInit() argument
99 options |= qual4 ? eQual4 : 0; in IlluminaReaderInit()
112 …ata(&self->dad, &IlluminaReader_master_columns_desc[6], NULL, (const void***)&self->qual4)) == 0 && in IlluminaReaderInit()
131 … bool read, bool qual1, bool qual4, bool intensity, bool noise, bool signal, bool qseq, in IlluminaReaderMake() argument
136 rc = IlluminaReaderInit(*self, read, qual1, qual4, intensity, noise, signal, qseq); in IlluminaReaderMake()
414 } else if( self->qual4 == NULL ) {
428 const signed char* q4 = *self->qual4;
/dports/biology/ncbi-vdb/ncbi-vdb-2.11.0/libs/sra/
H A Dreader-illumina.c82 const signed char** qual4; member
91 rc_t IlluminaReaderInit(const IlluminaReader* self, bool read, bool qual1, bool qual4, bool intensi… in IlluminaReaderInit() argument
99 options |= qual4 ? eQual4 : 0; in IlluminaReaderInit()
112 …ata(&self->dad, &IlluminaReader_master_columns_desc[6], NULL, (const void***)&self->qual4)) == 0 && in IlluminaReaderInit()
131 … bool read, bool qual1, bool qual4, bool intensity, bool noise, bool signal, bool qseq, in IlluminaReaderMake() argument
136 rc = IlluminaReaderInit(*self, read, qual1, qual4, intensity, noise, signal, qseq); in IlluminaReaderMake()
414 } else if( self->qual4 == NULL ) {
428 const signed char* q4 = *self->qual4;
/dports/devel/ppl/ppl-1.2/src/
H A Dchecked_defs.hh185 qual4, type4, qual5, type5, \ argument
198 PPL_U(qual3) PPL_U(type3)& arg3, PPL_U(qual4) \
338 qual4, type4, qual5, type5, after1) \ argument
349 PPL_U(qual3) PPL_U(type3) &arg3, PPL_U(qual4) \
/dports/sysutils/istio/istio-1.6.7/vendor/github.com/google/cel-go/interpreter/
H A Dattributes_test.go47 qual4, _ := attrs.NewQualifier(nil, 3, uint64(4))
50 attr.AddQualifier(qual4)
/dports/print/tex-dvipsk/texlive-20150521-source/texk/dvipsk/vms/
H A Dvmscli.c27 static $DESCRIPTOR(qual4,"filter");
174 status = cli$present(&qual4);
/dports/biology/sra-tools/sra-tools-2.11.0/tools/kar/
H A Dsra_delite.kfg13 translate NCBI:SRA:Illumina:qual4 2.1.0 3
H A Dsra_delite.sh252 translate NCBI:SRA:Illumina:qual4 2.1.0 3
/dports/biology/sra-tools/sra-tools-2.11.0/ncbi-vdb/test/kfg/fuzz-seeds/
H A Dvdb-copy.kfg66 …2na:packed,NCBI:SRA:pos16,INSDC:quality:phred,INSDC:quality:log_odds,NCBI:qual4,INSDC:position:one…
/dports/biology/sra-tools/sra-tools-2.11.0/test/install/
H A Dvdb-copy.kfg.2.8.168 …2na:packed,NCBI:SRA:pos16,INSDC:quality:phred,INSDC:quality:log_odds,NCBI:qual4,INSDC:position:one…
/dports/biology/sra-tools/sra-tools-2.11.0/tools/vdb-copy/
H A Dvdb-copy.kfg66 …2na:packed,NCBI:SRA:pos16,INSDC:quality:phred,INSDC:quality:log_odds,NCBI:qual4,INSDC:position:one…
/dports/biology/ncbi-vdb/ncbi-vdb-2.11.0/test/kfg/fuzz-seeds/
H A Dvdb-copy.kfg66 …2na:packed,NCBI:SRA:pos16,INSDC:quality:phred,INSDC:quality:log_odds,NCBI:qual4,INSDC:position:one…

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