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Searched refs:ran_seed (Results 1 – 12 of 12) sorted by relevance

/dports/science/qwalk/mainline-1.0.1-300-g1b7e381/src/macopt/
H A Drand.h7 #define ran_seed(s) srandom(s) macro
/dports/biology/iqtree/IQ-TREE-2.0.6/utils/
H A DMPIHelper.cpp47 rndSeed = Params::getInstance().ran_seed; in syncRandomSeed()
53 Params::getInstance().ran_seed = rndSeed; in syncRandomSeed()
H A Dtools.h1230 int ran_seed;
H A Dtools.cpp1139 params.ran_seed = (tv.tv_usec); in parseArg()
1140 params.subsampling_seed = params.ran_seed; in parseArg()
1541 params.ran_seed = abs(convert_int(argv[cnt])); in parseArg()
/dports/biology/iqtree/IQ-TREE-2.0.6/main/
H A Dphyloanalysis.cpp955 out << "Random seed number: " << params.ran_seed << endl << endl; in reportPhyloAnalysis()
2231 << RESAMPLE_NAME << " (seed: " << params.ran_seed << ")..." << endl; in runTreeReconstruction()
2707 int orig_seed = params.ran_seed; in runMultipleTreeReconstruction()
2719 params.ran_seed = orig_seed + run*1000 + MPIHelper::getInstance().getProcessID(); in runMultipleTreeReconstruction()
2721 …cout << endl << "---> START RUN NUMBER " << run + 1 << " (seed: " << params.ran_seed << ")" << end… in runMultipleTreeReconstruction()
2723 tree->getCheckpoint()->put("seed", params.ran_seed); in runMultipleTreeReconstruction()
2728 init_random(params.ran_seed); in runMultipleTreeReconstruction()
3122 init_random(params.ran_seed + sample); in runStandardBootstrap()
3125 …cout << "Creating " << RESAMPLE_NAME << " alignment (seed: " << params.ran_seed+sample << ")..." <… in runStandardBootstrap()
3559 init_random(params.ran_seed+i+1, false, &rstream); in doSymTest()
H A Dmain.cpp2493 checkpoint->get("iqtree.seed", Params::getInstance().ran_seed); in main()
2494 cout << "Seed: " << Params::getInstance().ran_seed << " "; in main()
2495 init_random(Params::getInstance().ran_seed + MPIHelper::getInstance().getProcessID(), true); in main()
2606 int seed = Params::getInstance().ran_seed; in main()
H A Dtreetesting.cpp795 init_random(params.ran_seed + omp_get_thread_num(), false, &rstream); in performAUTest()
1103 init_random(params.ran_seed + omp_get_thread_num(), false, &rstream); in evaluateTrees()
/dports/biology/iqtree/IQ-TREE-2.0.6/tree/
H A Diqtree.cpp339 init_random(params.ran_seed); in initSettings()
607 pllInst->randomNumberSeed = params->ran_seed + MPIHelper::getInstance().getProcessID(); in computeInitialTree()
703 int ran_seed = params->ran_seed + processID * 1000 + omp_get_thread_num(); in initCandidateTreeSet() local
704 init_random(ran_seed, false, &rstream); in initCandidateTreeSet()
726 int parRandSeed = Params::getInstance().ran_seed + processID * nParTrees + treeNr; in initCandidateTreeSet()
897 pllAttr.randomNumberSeed = params.ran_seed; in initializePLL()
2606 init_random(params->ran_seed); in refineBootTrees()
H A Ddiscordance.cpp22 init_random(params->ran_seed + omp_get_thread_num(), false, &rstream); in computeSiteConcordance()
H A Dquartet.cpp836 init_random(params->ran_seed + omp_get_thread_num(), false, &rstream); in computeQuartetLikelihoods()
H A Dphylotree.cpp4789 init_random(params->ran_seed + omp_get_thread_num(), false, &rstream); in testOneBranch()
/dports/graphics/mtpaint/mtPaint-4ea607e/src/
H A Dmemory.c10874 static uint32_t ran_seed[2]; variable
10878 ran_seed[1] = (ran_seed[0] = seed ^ 0xC0FFEE) * 0x10450405 + 1; in ran_init()
10886 uint32_t r, s0 = ran_seed[0], s1 = ran_seed[1]; in ran()
10891 ran_seed[0] = ROL(s0, 26) ^ s1 ^ (s1 << 9); in ran()
10892 ran_seed[1] = ROL(s1, 13); in ran()