/dports/science/antioch/antioch-0.4.0-156-g90ffa43/test/ |
H A D | kinetics_regression.C | 252 std::string reaction_id("0001"); in tester() 256 reaction_set.set_parameter_of_reaction(reaction_id,keywords,new_value); in tester() 257 reaction_id = "0002"; in tester() 261 reaction_set.set_parameter_of_reaction(reaction_id,keywords,new_value); in tester() 280 reaction_id = "0004"; in tester() 285 reaction_set.set_parameter_of_reaction(reaction_id,keywords, in tester() 286 … val * reaction_set.get_parameter_of_reaction(reaction_id,keywords) ); in tester()
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/dports/biology/py-orange3-bioinformatics/Orange3-Bioinformatics-4.3.1/orangecontrib/bioinformatics/kegg/ |
H A D | api.py | 144 def get_enzymes_by_reaction(self, reaction_id): argument 145 return _link_targets(self.link("ec", ids=[reaction_id])) 150 def get_compounds_by_reaction(self, reaction_id): argument 156 def get_glycans_by_reaction(self, reaction_id): argument 157 return _link_targets(self.link("gl", ids=[reaction_id])) 468 def get_enzymes_by_reaction(self, reaction_id): argument 469 return KeggApi.get_enzymes_by_reaction(self, reaction_id) 476 def get_compounds_by_reaction(self, reaction_id): argument 477 return KeggApi.get_compounds_by_reaction(self, reaction_id) 484 def get_glycans_by_reaction(self, reaction_id): argument [all …]
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/dports/devel/py-pygithub/PyGithub-1.54/github/ |
H A D | IssueComment.py | 170 def delete_reaction(self, reaction_id): argument 177 assert isinstance(reaction_id, int), reaction_id 180 self.url + "/reactions/" + str(reaction_id),
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H A D | CommitComment.py | 193 def delete_reaction(self, reaction_id): argument 200 assert isinstance(reaction_id, int), reaction_id 203 self.url + "/reactions/" + str(reaction_id),
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H A D | PullRequestComment.py | 227 def delete_reaction(self, reaction_id): argument 234 assert isinstance(reaction_id, int), reaction_id 237 self.url + "/reactions/" + str(reaction_id),
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H A D | Issue.py | 589 def delete_reaction(self, reaction_id): argument 595 assert isinstance(reaction_id, int), reaction_id 598 self.url + "/reactions/" + str(reaction_id),
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H A D | IssueComment.pyi | 19 def delete_reaction(self, reaction_id: int) -> bool: ...
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H A D | CommitComment.pyi | 21 def delete_reaction(self, reaction_id: int) -> bool: ...
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H A D | PullRequestComment.pyi | 21 def delete_reaction(self, reaction_id: int) -> bool: ...
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H A D | Issue.pyi | 48 def delete_reaction(self, reaction_id: int) -> bool: ...
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/dports/science/antioch/antioch-0.4.0-156-g90ffa43/src/kinetics/include/antioch/ |
H A D | reaction_set.h | 93 unsigned int reaction_by_id(const std::string & reaction_id) const; 99 …void set_parameter_of_reaction(const std::string & reaction_id, const std::vector<std::string> & k… 104 …CoeffType get_parameter_of_reaction(const std::string & reaction_id, const std::vector<std::string… 347 unsigned int ReactionSet<CoeffType>::reaction_by_id(const std::string & reaction_id) const in reaction_by_id() argument 352 if(this->reaction(r).id() == reaction_id) in reaction_by_id() 357 std::string errmsg = "Error: did not find reaction \"" + reaction_id + "\"\nIds are: "; in reaction_by_id() 462 …CoeffType ReactionSet<CoeffType>::get_parameter_of_reaction(const std::string & reaction_id, const… in get_parameter_of_reaction() argument 471 unsigned int r = this->reaction_by_id(reaction_id); in get_parameter_of_reaction() 512 …void ReactionSet<CoeffType>::set_parameter_of_reaction(const std::string & reaction_id, const std:… in set_parameter_of_reaction() argument 517 unsigned int r = this->reaction_by_id(reaction_id); in set_parameter_of_reaction()
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/dports/biology/avida/avida-2.12.4-src/avida-core/source/main/ |
H A D | cEnvironment.h | 135 const cString& GetReactionName(int reaction_id) const; 136 double GetReactionValue(int reaction_id); 190 const int task_count, const int reaction_id,
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H A D | cEnvironment.cc | 1659 … const int reaction_id, cReactionResult& result, cTaskContext& taskctx) const in DoProcesses() argument 1773 result.MarkReaction(reaction_id); in DoProcesses() 1791 result.AddBonus(bonus, reaction_id); in DoProcesses() 1807 result.AddBonus(bonus * task_count, reaction_id); in DoProcesses() 1820 result.AddBonus( reward , reaction_id); in DoProcesses() 1830 …s( value * (1.0 / decay) * ( exp((task_count-1) * decay) - exp(task_count * decay)), reaction_id ); in DoProcesses() 1901 const cString& cEnvironment::GetReactionName(int reaction_id) const in GetReactionName() 1903 return reaction_lib.GetReaction(reaction_id)->GetName(); in GetReactionName() 1906 double cEnvironment::GetReactionValue(int reaction_id) in GetReactionValue() argument 1908 cReaction* found_reaction = reaction_lib.GetReaction(reaction_id); in GetReactionValue()
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/dports/science/antioch/antioch-0.4.0-156-g90ffa43/src/parsing/src/ |
H A D | read_reaction_set_data.C | 171 if (verbose) std::cout << "Reaction \"" << parser->reaction_id() << "\":\n" in read_reaction_set_data() 213 … std::cout << "In reaction(s) including " << parser->reaction_id() << "\n" in read_reaction_set_data() 225 my_rxn->set_id(parser->reaction_id()); in read_reaction_set_data() 418 std::cerr << "In reaction " << parser->reaction_id() << "\n" in read_reaction_set_data()
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/dports/science/antioch/antioch-0.4.0-156-g90ffa43/src/parsing/include/antioch/ |
H A D | chemkin_parser.h | 136 const std::string reaction_id() const; 316 const std::string ChemKinParser<NumericType>::reaction_id() const in reaction_id() function
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H A D | xml_parser.h | 120 const std::string reaction_id() const;
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H A D | parser_base.h | 165 …virtual const std::string reaction_id() const {antioch_not_implemented_msg(_not_implemented); ret… in reaction_id() function
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/dports/science/code_saturne/code_saturne-7.1.0/src/cdo/ |
H A D | cs_gwf_tracer.h | 223 int reaction_id; /* id related to the reaction member
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H A D | cs_equation.h | 741 const int reaction_id);
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H A D | cs_gwf_tracer.c | 943 tracer->reaction_id = -1; in cs_gwf_tracer_init() 1268 tracer->reaction_id = cs_equation_add_reaction(eqp, r_pty); in cs_gwf_tracer_add_terms() 1372 cs_equation_get_reaction_property(tracer->eq, tracer->reaction_id); in cs_gwf_tracer_saturated_setup() 1467 cs_equation_get_reaction_property(tracer->eq, tracer->reaction_id); in cs_gwf_tracer_unsaturated_setup()
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H A D | cs_equation.c | 932 const int reaction_id) in cs_equation_get_reaction_property() argument 938 if (reaction_id < 0 || reaction_id > eqp->n_reaction_terms - 1) in cs_equation_get_reaction_property() 941 return eqp->reaction_properties[reaction_id]; in cs_equation_get_reaction_property()
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/dports/science/cantera/cantera-2.5.1-611-gc4d6ecc15/interfaces/cython/cantera/ |
H A D | ctml2yaml.py | 1150 reaction_id = reaction.attribs.get("id") 1151 if re_pattern.match(reaction_id): 1982 reaction_id = reaction.get("id", False) # type: Union[str, int, bool] 1983 if reaction_id: 1989 reaction_id = int(reaction_id) 1991 self.attribs["id"] = reaction_id
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/dports/sysutils/chezmoi/chezmoi-2.9.3/vendor/github.com/google/go-github/v41/update-urls/ |
H A D | reactions_test.go | 1634 <td><code>reaction_id</code></td> 1676 <span class="hljs-attr">reaction_id</span>: <span class="hljs-number">42</span>, 2212 <td><code>reaction_id</code></td> 2253 <span class="hljs-attr">reaction_id</span>: <span class="hljs-number">42</span>, 2352 <td><code>reaction_id</code></td> 2390 <span class="hljs-attr">reaction_id</span>: <span class="hljs-number">42</span>, 2931 <td><code>reaction_id</code></td> 2972 <span class="hljs-attr">reaction_id</span>: <span class="hljs-number">42</span>, 3513 <td><code>reaction_id</code></td> 4088 <td><code>reaction_id</code></td> [all …]
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/dports/net/cloudquery/cloudquery-0.16.0/vendor/github.com/google/go-github/v35/update-urls/ |
H A D | reactions_test.go | 1634 <td><code>reaction_id</code></td> 1676 <span class="hljs-attr">reaction_id</span>: <span class="hljs-number">42</span>, 2212 <td><code>reaction_id</code></td> 2253 <span class="hljs-attr">reaction_id</span>: <span class="hljs-number">42</span>, 2352 <td><code>reaction_id</code></td> 2390 <span class="hljs-attr">reaction_id</span>: <span class="hljs-number">42</span>, 2931 <td><code>reaction_id</code></td> 2972 <span class="hljs-attr">reaction_id</span>: <span class="hljs-number">42</span>, 3513 <td><code>reaction_id</code></td> 4088 <td><code>reaction_id</code></td> [all …]
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/dports/security/gopass/gopass-1.13.0/vendor/github.com/google/go-github/v33/update-urls/ |
H A D | reactions_test.go | 1634 <td><code>reaction_id</code></td> 1676 <span class="hljs-attr">reaction_id</span>: <span class="hljs-number">42</span>, 2212 <td><code>reaction_id</code></td> 2253 <span class="hljs-attr">reaction_id</span>: <span class="hljs-number">42</span>, 2352 <td><code>reaction_id</code></td> 2390 <span class="hljs-attr">reaction_id</span>: <span class="hljs-number">42</span>, 2931 <td><code>reaction_id</code></td> 2972 <span class="hljs-attr">reaction_id</span>: <span class="hljs-number">42</span>, 3513 <td><code>reaction_id</code></td> 4088 <td><code>reaction_id</code></td> [all …]
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