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Searched refs:reaction_id (Results 1 – 25 of 28) sorted by relevance

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/dports/science/antioch/antioch-0.4.0-156-g90ffa43/test/
H A Dkinetics_regression.C252 std::string reaction_id("0001"); in tester()
256 reaction_set.set_parameter_of_reaction(reaction_id,keywords,new_value); in tester()
257 reaction_id = "0002"; in tester()
261 reaction_set.set_parameter_of_reaction(reaction_id,keywords,new_value); in tester()
280 reaction_id = "0004"; in tester()
285 reaction_set.set_parameter_of_reaction(reaction_id,keywords, in tester()
286 … val * reaction_set.get_parameter_of_reaction(reaction_id,keywords) ); in tester()
/dports/biology/py-orange3-bioinformatics/Orange3-Bioinformatics-4.3.1/orangecontrib/bioinformatics/kegg/
H A Dapi.py144 def get_enzymes_by_reaction(self, reaction_id): argument
145 return _link_targets(self.link("ec", ids=[reaction_id]))
150 def get_compounds_by_reaction(self, reaction_id): argument
156 def get_glycans_by_reaction(self, reaction_id): argument
157 return _link_targets(self.link("gl", ids=[reaction_id]))
468 def get_enzymes_by_reaction(self, reaction_id): argument
469 return KeggApi.get_enzymes_by_reaction(self, reaction_id)
476 def get_compounds_by_reaction(self, reaction_id): argument
477 return KeggApi.get_compounds_by_reaction(self, reaction_id)
484 def get_glycans_by_reaction(self, reaction_id): argument
[all …]
/dports/devel/py-pygithub/PyGithub-1.54/github/
H A DIssueComment.py170 def delete_reaction(self, reaction_id): argument
177 assert isinstance(reaction_id, int), reaction_id
180 self.url + "/reactions/" + str(reaction_id),
H A DCommitComment.py193 def delete_reaction(self, reaction_id): argument
200 assert isinstance(reaction_id, int), reaction_id
203 self.url + "/reactions/" + str(reaction_id),
H A DPullRequestComment.py227 def delete_reaction(self, reaction_id): argument
234 assert isinstance(reaction_id, int), reaction_id
237 self.url + "/reactions/" + str(reaction_id),
H A DIssue.py589 def delete_reaction(self, reaction_id): argument
595 assert isinstance(reaction_id, int), reaction_id
598 self.url + "/reactions/" + str(reaction_id),
H A DIssueComment.pyi19 def delete_reaction(self, reaction_id: int) -> bool: ...
H A DCommitComment.pyi21 def delete_reaction(self, reaction_id: int) -> bool: ...
H A DPullRequestComment.pyi21 def delete_reaction(self, reaction_id: int) -> bool: ...
H A DIssue.pyi48 def delete_reaction(self, reaction_id: int) -> bool: ...
/dports/science/antioch/antioch-0.4.0-156-g90ffa43/src/kinetics/include/antioch/
H A Dreaction_set.h93 unsigned int reaction_by_id(const std::string & reaction_id) const;
99 …void set_parameter_of_reaction(const std::string & reaction_id, const std::vector<std::string> & k…
104 …CoeffType get_parameter_of_reaction(const std::string & reaction_id, const std::vector<std::string…
347 unsigned int ReactionSet<CoeffType>::reaction_by_id(const std::string & reaction_id) const in reaction_by_id() argument
352 if(this->reaction(r).id() == reaction_id) in reaction_by_id()
357 std::string errmsg = "Error: did not find reaction \"" + reaction_id + "\"\nIds are: "; in reaction_by_id()
462 …CoeffType ReactionSet<CoeffType>::get_parameter_of_reaction(const std::string & reaction_id, const… in get_parameter_of_reaction() argument
471 unsigned int r = this->reaction_by_id(reaction_id); in get_parameter_of_reaction()
512 …void ReactionSet<CoeffType>::set_parameter_of_reaction(const std::string & reaction_id, const std:… in set_parameter_of_reaction() argument
517 unsigned int r = this->reaction_by_id(reaction_id); in set_parameter_of_reaction()
/dports/biology/avida/avida-2.12.4-src/avida-core/source/main/
H A DcEnvironment.h135 const cString& GetReactionName(int reaction_id) const;
136 double GetReactionValue(int reaction_id);
190 const int task_count, const int reaction_id,
H A DcEnvironment.cc1659 … const int reaction_id, cReactionResult& result, cTaskContext& taskctx) const in DoProcesses() argument
1773 result.MarkReaction(reaction_id); in DoProcesses()
1791 result.AddBonus(bonus, reaction_id); in DoProcesses()
1807 result.AddBonus(bonus * task_count, reaction_id); in DoProcesses()
1820 result.AddBonus( reward , reaction_id); in DoProcesses()
1830 …s( value * (1.0 / decay) * ( exp((task_count-1) * decay) - exp(task_count * decay)), reaction_id ); in DoProcesses()
1901 const cString& cEnvironment::GetReactionName(int reaction_id) const in GetReactionName()
1903 return reaction_lib.GetReaction(reaction_id)->GetName(); in GetReactionName()
1906 double cEnvironment::GetReactionValue(int reaction_id) in GetReactionValue() argument
1908 cReaction* found_reaction = reaction_lib.GetReaction(reaction_id); in GetReactionValue()
/dports/science/antioch/antioch-0.4.0-156-g90ffa43/src/parsing/src/
H A Dread_reaction_set_data.C171 if (verbose) std::cout << "Reaction \"" << parser->reaction_id() << "\":\n" in read_reaction_set_data()
213 … std::cout << "In reaction(s) including " << parser->reaction_id() << "\n" in read_reaction_set_data()
225 my_rxn->set_id(parser->reaction_id()); in read_reaction_set_data()
418 std::cerr << "In reaction " << parser->reaction_id() << "\n" in read_reaction_set_data()
/dports/science/antioch/antioch-0.4.0-156-g90ffa43/src/parsing/include/antioch/
H A Dchemkin_parser.h136 const std::string reaction_id() const;
316 const std::string ChemKinParser<NumericType>::reaction_id() const in reaction_id() function
H A Dxml_parser.h120 const std::string reaction_id() const;
H A Dparser_base.h165 …virtual const std::string reaction_id() const {antioch_not_implemented_msg(_not_implemented); ret… in reaction_id() function
/dports/science/code_saturne/code_saturne-7.1.0/src/cdo/
H A Dcs_gwf_tracer.h223 int reaction_id; /* id related to the reaction member
H A Dcs_equation.h741 const int reaction_id);
H A Dcs_gwf_tracer.c943 tracer->reaction_id = -1; in cs_gwf_tracer_init()
1268 tracer->reaction_id = cs_equation_add_reaction(eqp, r_pty); in cs_gwf_tracer_add_terms()
1372 cs_equation_get_reaction_property(tracer->eq, tracer->reaction_id); in cs_gwf_tracer_saturated_setup()
1467 cs_equation_get_reaction_property(tracer->eq, tracer->reaction_id); in cs_gwf_tracer_unsaturated_setup()
H A Dcs_equation.c932 const int reaction_id) in cs_equation_get_reaction_property() argument
938 if (reaction_id < 0 || reaction_id > eqp->n_reaction_terms - 1) in cs_equation_get_reaction_property()
941 return eqp->reaction_properties[reaction_id]; in cs_equation_get_reaction_property()
/dports/science/cantera/cantera-2.5.1-611-gc4d6ecc15/interfaces/cython/cantera/
H A Dctml2yaml.py1150 reaction_id = reaction.attribs.get("id")
1151 if re_pattern.match(reaction_id):
1982 reaction_id = reaction.get("id", False) # type: Union[str, int, bool]
1983 if reaction_id:
1989 reaction_id = int(reaction_id)
1991 self.attribs["id"] = reaction_id
/dports/sysutils/chezmoi/chezmoi-2.9.3/vendor/github.com/google/go-github/v41/update-urls/
H A Dreactions_test.go1634 <td><code>reaction_id</code></td>
1676 <span class="hljs-attr">reaction_id</span>: <span class="hljs-number">42</span>,
2212 <td><code>reaction_id</code></td>
2253 <span class="hljs-attr">reaction_id</span>: <span class="hljs-number">42</span>,
2352 <td><code>reaction_id</code></td>
2390 <span class="hljs-attr">reaction_id</span>: <span class="hljs-number">42</span>,
2931 <td><code>reaction_id</code></td>
2972 <span class="hljs-attr">reaction_id</span>: <span class="hljs-number">42</span>,
3513 <td><code>reaction_id</code></td>
4088 <td><code>reaction_id</code></td>
[all …]
/dports/net/cloudquery/cloudquery-0.16.0/vendor/github.com/google/go-github/v35/update-urls/
H A Dreactions_test.go1634 <td><code>reaction_id</code></td>
1676 <span class="hljs-attr">reaction_id</span>: <span class="hljs-number">42</span>,
2212 <td><code>reaction_id</code></td>
2253 <span class="hljs-attr">reaction_id</span>: <span class="hljs-number">42</span>,
2352 <td><code>reaction_id</code></td>
2390 <span class="hljs-attr">reaction_id</span>: <span class="hljs-number">42</span>,
2931 <td><code>reaction_id</code></td>
2972 <span class="hljs-attr">reaction_id</span>: <span class="hljs-number">42</span>,
3513 <td><code>reaction_id</code></td>
4088 <td><code>reaction_id</code></td>
[all …]
/dports/security/gopass/gopass-1.13.0/vendor/github.com/google/go-github/v33/update-urls/
H A Dreactions_test.go1634 <td><code>reaction_id</code></td>
1676 <span class="hljs-attr">reaction_id</span>: <span class="hljs-number">42</span>,
2212 <td><code>reaction_id</code></td>
2253 <span class="hljs-attr">reaction_id</span>: <span class="hljs-number">42</span>,
2352 <td><code>reaction_id</code></td>
2390 <span class="hljs-attr">reaction_id</span>: <span class="hljs-number">42</span>,
2931 <td><code>reaction_id</code></td>
2972 <span class="hljs-attr">reaction_id</span>: <span class="hljs-number">42</span>,
3513 <td><code>reaction_id</code></td>
4088 <td><code>reaction_id</code></td>
[all …]

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