/dports/science/cdk/cdk-cdk-2.3/base/data/src/main/java/org/openscience/cdk/ |
H A D | ReactionSet.java | 69 private IReaction[] reactions; field in ReactionSet 98 reactions[reactionCount] = reaction; in addReaction() 110 reactions[pos].removeListener(this); in removeReaction() 112 reactions[i] = reactions[i + 1]; in removeReaction() 129 return reactions[number]; in getReaction() 164 return reactions[pointer++]; 180 growArraySize = reactions.length; 182 System.arraycopy(reactions, 0, newreactions, 0, reactions.length); 183 reactions = newreactions; 222 clone.reactions[f] = (IReaction) ((IReaction) reactions[f]).clone(); [all …]
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/dports/science/cdk/cdk-cdk-2.3/base/silent/src/main/java/org/openscience/cdk/silent/ |
H A D | ReactionSet.java | 69 private IReaction[] reactions; field in ReactionSet 98 reactions[reactionCount] = reaction; in addReaction() 110 reactions[i] = reactions[i + 1]; in removeReaction() 112 reactions[reactionCount - 1] = null; in removeReaction() 135 public Iterable<IReaction> reactions() { in reactions() method in ReactionSet 161 return reactions[pointer++]; 177 growArraySize = reactions.length; 179 System.arraycopy(reactions, 0, newreactions, 0, reactions.length); 180 reactions = newreactions; 219 clone.reactions[f] = (Reaction) ((Reaction) reactions[f]).clone(); [all …]
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/dports/science/cantera/cantera-2.5.1-611-gc4d6ecc15/test/data/ |
H A D | duplicate-reactions.yaml | 13 reactions: [A-reactions] 18 reactions: [B-reactions] 23 reactions: [C-reactions] 28 reactions: [D-reactions] 33 reactions: [E-reactions] 38 reactions: [F-reactions] 43 reactions: [G-reactions] 48 reactions: [H-reactions] 53 reactions: [I-reactions] 58 reactions: [J-reactions] [all …]
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H A D | phase-reaction-spec2.yaml | 2 # should work fine (no reactions) 7 # should also work fine (all reactions) 13 # should work fine (no reactions) 14 - name: kinetics-reactions-none 18 reactions: none 21 - name: nokinetics-reactions 24 reactions: all 26 reactions:
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H A D | phase-reaction-spec1.yaml | 7 # should work fine (kinetics model with no reactions) 8 - name: kinetics-reactions-none 12 reactions: none 25 reactions: all 28 - name: nokinetics-reactions 31 reactions: all
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/dports/net-im/ruqola/ruqola-1.6.1/src/core/messages/ |
H A D | reactions.cpp | 13 void Reactions::setReactions(const QVector<Reaction> &reactions) in setReactions() argument 15 mReactions = reactions; in setReactions() 18 QVector<Reaction> Reactions::reactions() const in reactions() function in Reactions 49 return mReactions == other.reactions(); in operator ==() 54 for (int i = 0; i < t.reactions().count(); i++) { in operator <<() 55 d << t.reactions().at(i) << "\n"; in operator <<() 60 QJsonObject Reactions::serialize(const Reactions &reactions) in serialize() argument 63 for (int i = 0; i < reactions.reactions().count(); ++i) { in serialize() 65 …react[QLatin1String("usernames")] = QJsonArray::fromStringList(reactions.reactions().at(i).userNam… in serialize() 66 obj[reactions.reactions().at(i).reactionName()] = react; in serialize()
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/dports/net-im/ruqola/ruqola-1.6.1/src/widgets/room/delegate/ |
H A D | messagedelegatehelperreactions.cpp | 32 layouts.reserve(reactions.count()); in layoutReactions() 39 for (const Reaction &reaction : reactions) { in layoutReactions() 84 const QVector<Reaction> reactions = message->reactions().reactions(); in draw() local 85 if (reactions.isEmpty()) { in draw() 89 const QVector<ReactionLayout> layouts = layoutReactions(reactions, reactionsRect, option); in draw() 133 const QVector<Reaction> reactions = message->reactions().reactions(); in sizeHint() local 134 if (!reactions.isEmpty()) { in sizeHint() 145 …const QVector<ReactionLayout> reactions = layoutReactions(message->reactions().reactions(), reacti… in handleMouseEvent() local 146 for (const ReactionLayout &reactionLayout : reactions) { in handleMouseEvent() 165 …const QVector<ReactionLayout> reactions = layoutReactions(message->reactions().reactions(), reacti… in handleHelpEvent() local [all …]
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/dports/science/cdk/cdk-cdk-2.3/base/standard/src/main/java/org/openscience/cdk/tools/manipulator/ |
H A D | ReactionSetManipulator.java | 47 for (IReaction iReaction : set.reactions()) { in getAtomCount() 55 for (IReaction iReaction : set.reactions()) { in getBondCount() 62 for (IReaction reaction : set.reactions()) { in removeAtomAndConnectedElectronContainers() 68 for (IReaction reaction : set.reactions()) { in removeElectronContainer() 81 for (IReaction reaction : set.reactions()) { in getAllMolecules() 101 for (IReaction reaction : set.reactions()) { in getAllIDs() 118 for (IReaction reaction : set.reactions()) { in getRelevantReaction() 128 for (IReaction reaction : set.reactions()) { in getRelevantReaction() 190 for (IReaction reaction : set.reactions()) { in getRelevantAtomContainer() 200 for (IReaction reaction : set.reactions()) { in getRelevantAtomContainer() [all …]
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/dports/www/mattermost-server/mattermost-server-6.0.2/api4/ |
H A D | reaction_test.go | 43 reactions, appErr := th.App.GetReactionsForPost(postId) 51 reactions, appErr := th.App.GetReactionsForPost(postId) 63 reactions, appErr := th.App.GetReactionsForPost(postId) 75 reactions, appErr := th.App.GetReactionsForPost(postId) 162 reactions, appErr := th.App.GetReactionsForPost(postId) 229 var reactions []*model.Reaction 234 reactions = append(reactions, reaction) 242 for _, r := range reactions { 243 assert.Contains(t, reactions, r) 322 reactions, appErr = th.App.GetReactionsForPost(postId) [all …]
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/dports/games/openxcom/OpenXcom-1.0/src/Ruleset/ |
H A D | Unit.h | 34 …int tu, stamina, health, bravery, reactions, firing, throwing, strength, psiStrength, psiSkill, me… member 36 …UnitStats() : tu(0), stamina(0), health(0), bravery(0), reactions(0), firing(0), throwing(0), stre… in UnitStats() 37 …lee_) : tu(tu_), stamina(stamina_), health(health_), bravery(bravery_), reactions(reactions_), fir… in UnitStats() 38 …ts.stamina; health += stats.health; bravery += stats.bravery; reactions += stats.reactions; firing… 39 …stats.stamina, health + stats.health, bravery + stats.bravery, reactions + stats.reactions, firing… 40 …ts.stamina; health -= stats.health; bravery -= stats.bravery; reactions -= stats.reactions; firing… 41 …stats.stamina, health - stats.health, bravery - stats.bravery, reactions - stats.reactions, firing… 42 …UnitStats operator-() const { return UnitStats(-tu, -stamina, -health, -bravery, -reactions, -firi… 43 …y = (stats.bravery ? stats.bravery : bravery); reactions = (stats.reactions ? stats.reactions : re… in merge() 122 node["reactions"] = rhs.reactions; [all …]
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/dports/www/chromium-legacy/chromium-88.0.4324.182/third_party/blink/renderer/core/html/custom/ |
H A D | custom_element_reaction_stack.cc | 51 if (CustomElementReactionQueue* reactions = map_.at(element)) { in InvokeReactions() local 52 reactions->InvokeReactions(*element); in InvokeReactions() 53 CHECK(reactions->IsEmpty()); in InvokeReactions() 72 CustomElementReactionQueue* reactions = map_.at(&element); in Enqueue() local 73 if (!reactions) { in Enqueue() 74 reactions = MakeGarbageCollected<CustomElementReactionQueue>(); in Enqueue() 75 map_.insert(&element, reactions); in Enqueue() 78 reactions->Add(reaction); in Enqueue() 101 if (CustomElementReactionQueue* reactions = map_.at(&element)) in ClearQueue() local 102 reactions->Clear(); in ClearQueue()
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/dports/www/qt5-webengine/qtwebengine-everywhere-src-5.15.2/src/3rdparty/chromium/third_party/blink/renderer/core/html/custom/ |
H A D | custom_element_reaction_stack.cc | 51 if (CustomElementReactionQueue* reactions = map_.at(element)) { in InvokeReactions() local 52 reactions->InvokeReactions(*element); in InvokeReactions() 53 CHECK(reactions->IsEmpty()); in InvokeReactions() 72 CustomElementReactionQueue* reactions = map_.at(&element); in Enqueue() local 73 if (!reactions) { in Enqueue() 74 reactions = MakeGarbageCollected<CustomElementReactionQueue>(); in Enqueue() 75 map_.insert(&element, reactions); in Enqueue() 78 reactions->Add(reaction); in Enqueue() 101 if (CustomElementReactionQueue* reactions = map_.at(&element)) in ClearQueue() local 102 reactions->Clear(); in ClearQueue()
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/dports/science/py-OpenMC/openmc-0.12.2/tests/unit_tests/ |
H A D | test_deplete_chain.py | 164 A.reactions = [ 172 B.reactions = [ 178 C.reactions = [ 257 for rx in chain_nuc.reactions: 367 parent.reactions.append(nuclide.ReactionTuple( 386 for r in parent.reactions: 486 assert set(no_depth.reactions) == set(gnd_simple_chain.reactions) 498 for newrxn, refrxn in zip(u5_round0.reactions, ref_U5.reactions): 520 for newrxn, refrxn in zip(bareI5.reactions, ref_iodine.reactions): 529 assert u5_round1.reactions == ref_U5.reactions [all …]
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/dports/science/openmc/openmc-0.12.2/tests/unit_tests/ |
H A D | test_deplete_chain.py | 164 A.reactions = [ 172 B.reactions = [ 178 C.reactions = [ 257 for rx in chain_nuc.reactions: 367 parent.reactions.append(nuclide.ReactionTuple( 386 for r in parent.reactions: 486 assert set(no_depth.reactions) == set(gnd_simple_chain.reactions) 498 for newrxn, refrxn in zip(u5_round0.reactions, ref_U5.reactions): 520 for newrxn, refrxn in zip(bareI5.reactions, ref_iodine.reactions): 529 assert u5_round1.reactions == ref_U5.reactions [all …]
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/dports/www/mattermost-server/mattermost-server-6.0.2/app/ |
H A D | reaction.go | 64 reactions, err := a.Srv().Store.Reaction().GetForPost(postID, true) 68 return reactions, nil 72 reactions := make(map[string][]*model.Reaction) 80 reactionsForPost := reactions[reaction.PostId] 83 reactions[reaction.PostId] = reactionsForPost 86 reactions = populateEmptyReactions(postIDs, reactions) 87 return reactions, nil 90 func populateEmptyReactions(postIDs []string, reactions map[string][]*model.Reaction) map[string][]… 92 if _, present := reactions[postID]; !present { 93 reactions[postID] = []*model.Reaction{} [all …]
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/dports/biology/py-biopython/biopython-1.79/Tests/MetaTool/ |
H A D | Meta3.out | 31 The following line indicates reversible (0) and irreversible reactions (1) 42 3 reactions (columns) are sorted in the same order as in the ENZREV ENZIRREV section. 52 The remaining overall reactions perform no net transformation of external metabolites. 58 3 reactions (columns) are sorted in the same order as in the ENZREV ENZIRREV section. 68 The remaining overall reactions perform no net transformation of external metabolites. 70 REDUCED SYSTEM with 7 branch point metabolites in 1 reactions (columns) 73 The following line indicates reversible (0) and irreversible reactions (1) 77 met cons built reactions 80 met cons built reactions 102 The remaining overall reactions perform no net transformation of external metabolites. [all …]
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H A D | Meta6.out | 49 The following line indicates reversible (0) and irreversible reactions (1) 61 6 reactions (columns) are sorted in the same order as in the ENZREV ENZIRREV section. 72 The remaining overall reactions perform no net transformation of external metabolites. 79 6 reactions (columns) are sorted in the same order as in the ENZREV ENZIRREV section. 90 The remaining overall reactions perform no net transformation of external metabolites. 95 REDUCED SYSTEM with 13 branch point metabolites in 2 reactions (columns) 98 The following line indicates reversible (0) and irreversible reactions (1) 102 met cons built reactions 105 met cons built reactions 133 The remaining overall reactions perform no net transformation of external metabolites. [all …]
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H A D | Meta8.out | 51 The following line indicates reversible (0) and irreversible reactions (1) 61 6 reactions (columns) are sorted in the same order as in the ENZREV ENZIRREV section. 71 The remaining overall reactions perform no net transformation of external metabolites. 76 6 reactions (columns) are sorted in the same order as in the ENZREV ENZIRREV section. 86 The remaining overall reactions perform no net transformation of external metabolites. 88 REDUCED SYSTEM with 14 branch point metabolites in 6 reactions (columns) 91 The following line indicates reversible (0) and irreversible reactions (1) 95 met cons built reactions 98 met cons built reactions 126 The remaining overall reactions perform no net transformation of external metabolites. [all …]
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H A D | Meta7.out | 59 The following line indicates reversible (0) and irreversible reactions (1) 69 6 reactions (columns) are sorted in the same order as in the ENZREV ENZIRREV section. 79 The remaining overall reactions perform no net transformation of external metabolites. 84 6 reactions (columns) are sorted in the same order as in the ENZREV ENZIRREV section. 94 The remaining overall reactions perform no net transformation of external metabolites. 96 REDUCED SYSTEM with 19 branch point metabolites in 6 reactions (columns) 99 The following line indicates reversible (0) and irreversible reactions (1) 103 met cons built reactions 106 met cons built reactions 139 The remaining overall reactions perform no net transformation of external metabolites. [all …]
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H A D | Meta4.out | 63 The following line indicates reversible (0) and irreversible reactions (1) 75 8 reactions (columns) are sorted in the same order as in the ENZREV ENZIRREV section. 86 The remaining overall reactions perform no net transformation of external metabolites. 93 8 reactions (columns) are sorted in the same order as in the ENZREV ENZIRREV section. 104 The remaining overall reactions perform no net transformation of external metabolites. 106 REDUCED SYSTEM with 21 branch point metabolites in 2 reactions (columns) 109 The following line indicates reversible (0) and irreversible reactions (1) 113 met cons built reactions 116 met cons built reactions 154 The remaining overall reactions perform no net transformation of external metabolites. [all …]
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/dports/biology/libsbml/libsbml-5.19.0/examples/perl/ |
H A D | extractReactions.pl | 62 my @reactions = (); 69 push @reactions, [ $reaction->getId(), 76 @reactions = sort {length $b->[0] <=> length $a->[0]} @reactions; 77 my $format = sprintf("%%%ds: %%s\n", length $reactions[0]->[0]); 78 foreach my $r (@reactions) {
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/dports/biology/py-python-libsbml/python-libsbml-5.19.0/libsbml_source/examples/perl/ |
H A D | extractReactions.pl | 62 my @reactions = (); 69 push @reactions, [ $reaction->getId(), 76 @reactions = sort {length $b->[0] <=> length $a->[0]} @reactions; 77 my $format = sprintf("%%%ds: %%s\n", length $reactions[0]->[0]); 78 foreach my $r (@reactions) {
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/dports/biology/py-biopython/biopython-1.79/Bio/Pathway/ |
H A D | __init__.py | 162 def __init__(self, reactions=()): argument 164 self.__reactions = set(reactions) 188 def reactions(self): member in System 199 set(reduce(lambda s, x: s + x, [x.species() for x in self.reactions()], [])) 220 reactions = self.reactions() 221 stoch = [] * len(reactions) 222 for i in range(len(reactions)): 224 for s in reactions[i].species(): 225 stoch[species.index(s)] = reactions[i].reactants[s] 226 return (species, reactions, stoch)
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/dports/science/py-OpenMC/openmc-0.12.2/openmc/data/ |
H A D | neutron.py | 110 self.reactions = OrderedDict() 115 return mt in self.reactions 118 if mt in self.reactions: 119 return self.reactions[mt] 159 def reactions(self): member in IncidentNeutron 217 @reactions.setter 218 def reactions(self, reactions): member in IncidentNeutron 220 self._reactions = reactions 279 for mt in data.reactions: 623 data.reactions[1] = total [all …]
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/dports/science/openmc/openmc-0.12.2/openmc/data/ |
H A D | neutron.py | 110 self.reactions = OrderedDict() 115 return mt in self.reactions 118 if mt in self.reactions: 119 return self.reactions[mt] 159 def reactions(self): member in IncidentNeutron 217 @reactions.setter 218 def reactions(self, reactions): member in IncidentNeutron 220 self._reactions = reactions 279 for mt in data.reactions: 623 data.reactions[1] = total [all …]
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