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/dports/devel/R-cran-rgexf/rgexf/man/
H A Dread.gexf.Rd2 % Please edit documentation in R/read.gexf.R
3 \name{read.gexf}
4 \alias{read.gexf}
5 \title{Reads gexf (.gexf) file}
7 read.gexf(x)
10 \item{x}{String. Path to the gexf file.}
13 A \code{gexf} object.
16 \code{read.gexf} reads gexf graph files and imports its elements as a
17 \code{gexf} class object
24 fn <- system.file("gexf-graphs/lesmiserables.gexf", package = "rgexf")
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H A Dhead.gexf.Rd3 \name{head.gexf}
4 \alias{head.gexf}
5 \title{\code{head} method for gexf objects}
7 \method{head}{gexf}(x, n_nodes = 6L, n_edges = n_nodes, ...)
10 \item{x}{An object of class \link{gexf}.}
17 List the first \code{n_nodes} and \code{n_edges} of the \link{gexf} file.
20 fn <- system.file("gexf-graphs/lesmiserables.gexf", package = "rgexf")
21 g <- read.gexf(fn)
H A Digraph.to.gexf.Rd3 \name{igraph.to.gexf}
4 \alias{igraph.to.gexf}
5 \alias{gexf.to.igraph}
8 igraph.to.gexf(igraph.obj, ...)
10 gexf.to.igraph(gexf.obj)
15 \item{...}{Further arguments passed to \code{\link[=gexf]{gexf()}}.}
17 \item{gexf.obj}{An object of class \code{gexf}.}
20 \itemize{ \item For \code{igraph.to.gexf} : \code{gexf} class object
38 fn <- system.file("gexf-graphs/lesmiserables.gexf", package = "rgexf")
39 gexf1 <- read.gexf(fn)
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H A Drgexf-package.Rd10 Create, read and write GEXF (Graph Exchange XML Format) graph files (used in
14 Using the XML package, it allows the user to easily build/read graph files
19 data-frames, visualize the graph on a web browser through "gexf-js" (a
22 Finally, the functions \code{igraph.to.gexf} and \code{gexf.to.igraph}
23 convert objects from \code{igraph} to \code{gexf} and viceversa keeping
31 \url{https://gephi.org/gexf/1.2draft/gexf-12draft-primer.pdf}
36 demo(gexf) # Example of gexf command using fictional data.
45 demo(gexfigraph) # Two-way gexf-igraph conversion
53 \url{https://gephi.org/} \item GEXF project site: \url{https://gephi.org/gexf/format//}
54 \item gexf-js project website: \url{https://github.com/raphv/gexf-js}
H A Dplot.gexf.Rd5 \alias{plot.gexf}
6 \title{Visualizing GEXF graph files using gexf-js}
10 graphFile = "network.gexf",
29 \method{plot}{gexf}(
32 graphFile = "network.gexf",
43 \item{graphFile}{Name of the gexf file.}
86 \item{x}{An object of class \code{gexf}.}
116 x <- igraph.to.gexf(gexf.to.igraph(x))
135 path <- system.file("gexf-graphs/lesmiserables.gexf", package="rgexf")
136 graph <- read.gexf(path)
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/dports/devel/R-cran-rgexf/rgexf/inst/doc/
H A Drgexf.Rmd24 visualize graphs using the [`gexf-js` JavaScript library](https://github.com/raphv/gexf-js).
31 featured in Gephi. To read GEXF files, we can use the `read.gexf` function:
33 ```{r read-gexf}
39 "gexf-graphs/lesmiserables.gexf", package = "rgexf"
41 lesmi <- read.gexf(fn)
52 lesmi_ig <- gexf.to.igraph(lesmi)
63 head(igraph.to.gexf(lesmi_ig))
67 Using the `plot.gexf` method--which uses the `gexf-js` JavaScript library--results
74 ```{r gexf-js, echo = FALSE}
160 graph <- gexf(
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/dports/devel/R-cran-rgexf/rgexf/vignettes/
H A Drgexf.Rmd24 visualize graphs using the [`gexf-js` JavaScript library](https://github.com/raphv/gexf-js).
31 featured in Gephi. To read GEXF files, we can use the `read.gexf` function:
33 ```{r read-gexf}
39 "gexf-graphs/lesmiserables.gexf", package = "rgexf"
41 lesmi <- read.gexf(fn)
52 lesmi_ig <- gexf.to.igraph(lesmi)
63 head(igraph.to.gexf(lesmi_ig))
67 Using the `plot.gexf` method--which uses the `gexf-js` JavaScript library--results
74 ```{r gexf-js, echo = FALSE}
160 graph <- gexf(
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/dports/devel/R-cran-rgexf/rgexf/
H A DMD57 558cafe295595ccfa09aae24c19546a8 *R/gexf.R
13 f35b0b900a2bdeb1b4c36545966e3884 *R/read.gexf.R
23 4dd007e00a7b040fc69588651a83edf2 *demo/gexf.R
39 898067580ad2a3dd498e5b689fd2b3b2 *inst/gexf-graphs/lesmiserables.gexf
41 767ce00a6eb441cdee92846a24afce37 *inst/gexf-js/LICENSE
63 7103ddda95934eafa8b7a90cb28c913e *man/add.gexf.node.Rd
73 edf67cf6a72049ec8fce65e136ddbb25 *man/gexf-class.Rd
74 a18e73c53033d5c2f17cae0de812f614 *man/gexf-methods.Rd
75 c1778362fb6df8459cbb59feb90a1709 *man/head.gexf.Rd
78 2ea3e23fb2cbf6f8402caa51ed629b69 *man/plot.gexf.Rd
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H A DNAMESPACE3 S3method(head,gexf)
4 S3method(plot,gexf)
5 S3method(print,gexf)
6 S3method(summary,gexf)
8 export(add.gexf.edge)
9 export(add.gexf.node)
14 export(gexf)
19 export(read.gexf)
20 export(rm.gexf.edge)
21 export(rm.gexf.node)
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H A DNEWS.md40 * `plot.gexf` method now uses `gexf-js` instead of `sigma.js`.
42 * Now `igraph.to.gexf` passes arguments to `gexf`. Before, it was only passing
56 * `read.gexf` now parses viz attributes (color, position, and size).
63 `write.gexf` since it makes more sense. `write.gexf` should only be for
132 - New functions `igraph.to.gexf` and `gexf.to.igraph` converts objects
195 - New functions `new.gexf.graph`, `add.gexf.node`, `add.gexf.edge`,
196 `rm.gexf.node` and `rm.gexf.edge` allow to build and manipulate
199 - New function `read.gexf` allows to import gexf files as `gexf`
202 - `gexf` function now it is called `write.gexf`.
214 - New methods for `gexf` objects: `print.gexf` and `summary.gexf`.
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H A DChangeLog12 * R/rgexf.r: Better rescale for gexf-js.
20 * R/igraph.r, R/read.gexf.r: Mapping positions, size and colors, ~~Still a
34 * R/gexf-js.r: Passing httd.args
41 * Plotting now is made through gexf-js.
50 * R/write.gexf: idem.
55 * R/rgexf.r: Started moving from write.gexf to gexf. In the 2.0
56 version write.gexf should be for exporting gexf graphs only.
57 * demo/*.R: Replaced write.gexf with gexf.
65 gexf file.
H A DREADME.md18 others). `rgexf` allows the user to quickly build/read graph files,
114 We can use the `read.gexf` function to read GEXF files into R:
121 g <- read.gexf(g)
126gexf xmlns="http://www.gexf.net/1.3" xmlns:viz="http://www.gexf.net/1.3/viz" xmlns:xsi="http://www…
196 ## </gexf>
275gexf xmlns="http://www.gexf.net/1.3" xmlns:viz="http://www.gexf.net/1.3/viz" xmlns:xsi="http://www…
313 ## </gexf>
336gexf xmlns="http://www.gexf.net/1.3" xmlns:viz="http://www.gexf.net/1.3/viz" xmlns:xsi="http://www…
374 ## </gexf>
439gexf xmlns="http://www.gexf.net/1.3" xmlns:viz="http://www.gexf.net/1.3/viz" xmlns:xsi="http://www…
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H A DDESCRIPTION12 person("Raphaël", "Velt", role=c("cph"), comment="gexf-js library"),
17 Description: Create, read and write 'GEXF' (Graph Exchange 'XML' Format) graph
19 easily build/read graph files including attributes, 'GEXF' visual attributes (such
22 through data-frames, visualize the graph on a web browser through 'gexf-js' (a
37 Raphaël Velt [cph] (gexf-js library),
/dports/devel/R-cran-rgexf/rgexf/inst/
H A DNEWS41 - plot.gexf method now uses gexf-js instead of sigma.js.
43 - Now igraph.to.gexf passes arguments to gexf. Before, it was only
58 - read.gexf now parses viz attributes (color, position, and size).
65 write.gexf since it makes more sense. write.gexf should only be for
131 - New functions igraph.to.gexf and gexf.to.igraph converts objects
194 - New functions new.gexf.graph, add.gexf.node, add.gexf.edge,
195 rm.gexf.node and rm.gexf.edge allow to build and manipulate gexf
198 - New function read.gexf allows to import gexf files as gexf class
201 - gexf function now it is called write.gexf.
213 - New methods for gexf objects: print.gexf and summary.gexf.
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/dports/math/ogdf/OGDF/include/ogdf/fileformats/
H A DGexfParser.h47 namespace gexf {
81 bool read(Graph &G);
82 bool read(Graph &G, GraphAttributes &GA);
83 bool read(Graph &G, ClusterGraph &C);
84 bool read(Graph &G, ClusterGraph &C, ClusterGraphAttributes &CA);
/dports/devel/R-cran-rgexf/rgexf/inst/gexf-js/
H A DREADME.md7 **The issue below is the source of 90% of support emails I receive, please read carefully**
15 $ cd /path/to/gexf-js
71 2. Put it in the gexf-js directory
74 You can view more Gexf files by pointing your browser to index.html#Filename.gexf
/dports/www/R-cran-htmlwidgets/htmlwidgets/vignettes/
H A Ddevelop_intro.Rmd41 data <- system.file("examples/ediaspora.gexf.xml", package = "sigma")
67 | | | | |-- sigma.parsers.gexf.min.js
83 - plugins/sigma.parsers.gexf.min.js
95 sigma <- function(gexf, drawEdges = TRUE, drawNodes = TRUE,
98 # read the gexf file
99 data <- paste(readLines(gexf), collapse="\n")
155 // parse gexf data
164 sigma.parsers.gexf(
165 data, // parsed gexf data
234 gexf <- system.file("examples/ediaspora.gexf.xml", package = "sigma")
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/dports/www/R-cran-htmlwidgets/htmlwidgets/inst/doc/
H A Ddevelop_intro.Rmd41 data <- system.file("examples/ediaspora.gexf.xml", package = "sigma")
67 | | | | |-- sigma.parsers.gexf.min.js
83 - plugins/sigma.parsers.gexf.min.js
95 sigma <- function(gexf, drawEdges = TRUE, drawNodes = TRUE,
98 # read the gexf file
99 data <- paste(readLines(gexf), collapse="\n")
155 // parse gexf data
164 sigma.parsers.gexf(
165 data, // parsed gexf data
234 gexf <- system.file("examples/ediaspora.gexf.xml", package = "sigma")
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/dports/math/py-networkx/networkx-2.6.3/doc/release/
H A Dapi_1.4.rst9 - :mod:`read GraphML files from yEd <networkx.readwrite.graphml>`
10 - :mod:`read/write GEXF format files <networkx.readwrite.gexf>`
18 - :mod:`read GIS shapefiles <networkx.readwrite.nx_shp>`
H A Drelease_2.0.rst38 A view is a read-only object that is quick to create, automatically updated, and
318 - Gml read fix. (#1962)
340 - Improve gexf.py (#2010)
377 - extend convert_bool in gexf.py and graphml.py to all valid boolean (#1063)
H A Dold_release_log.rst123 - pandas dataframe read/write added.
274 - Read and write version 1.2 of :mod:`GEXF reader <networkx.readwrite.gexf>` format
335 - :mod:`read GraphML files from yEd <networkx.readwrite.graphml>`
336 - :mod:`read/write GEXF format files <networkx.readwrite.gexf>`
344 - :mod:`read GIS shapefiles <networkx.readwrite.nx_shp>`
425 - :mod:`Edgelist format to read and write data with attributes <networkx.readwrite.edgelist>`
819 - read and write unicode graph data to text files
820 - read and write YAML format text files, http://yaml.org
921 - read/write routines in io.py now handle XGraph() type and
923 - optional mapping of type for read/write routine to allow
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/dports/math/ogdf/OGDF/src/ogdf/fileformats/
H A DGraphIO.cpp190 return parser.read(G); in readGML()
1520 return parser.read(G); in readGraphML()
1553 return parser.read(G); in readDOT()
1588 gexf::Parser parser(is); in readGEXF()
1589 return parser.read(G); in readGEXF()
1597 gexf::Parser parser(is); in readGEXF()
1606 gexf::Parser parser(is); in readGEXF()
1615 gexf::Parser parser(is); in readGEXF()
1625 return parser.read(G); in readGDF()
1643 return parser.read(G); in readTLP()
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H A DGexfParser.cpp40 namespace gexf { namespace
610 bool Parser::read(Graph &G) in read() function in ogdf::gexf::Parser
623 bool Parser::read(Graph &G, GraphAttributes &GA) in read() function in ogdf::gexf::Parser
640 bool Parser::read(Graph &G, ClusterGraph &C) in read() function in ogdf::gexf::Parser
654 bool Parser::read(Graph &G, ClusterGraph &C, ClusterGraphAttributes &CA) in read() function in ogdf::gexf::Parser
/dports/graphics/R-cran-DiagrammeR/DiagrammeR/
H A DNEWS.md7 * Removes the ability to save a DiagrammeR graph object as a Gephi file (.gexf) since the **rgexf**…
61 * Graphs can be easily saved to disk (and read from disk) using the `save_graph()` and `open_graph(…