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Searched refs:readStop (Results 1 – 25 of 75) sorted by relevance

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/dports/audio/rezound/rezound-0.13.1beta/src/backend/Effects/
H A DCChangeRateEffect.cpp93 const sample_fpos_t readStop=(rateNode2.x*oldLength);
95 if(readStart==readStop)
101 const sample_fpos_t m=(s2-s1)/(readStop-readStart);
135 const sample_fpos_t subReadLength=(readStop-readStart)+1;
155 sample_pos_t copyLength=(sample_pos_t)((readStop-readStart)+1);
190 sample_fpos_t readStop=rateNode2.x*oldLength;
191 if(readStart==readStop) // vertical rate change
194 sample_fpos_t m=(s2-s1)/(readStop-readStart);
199 sample_fpos_t wp=(1.0/m)*sample_fpos_log(sample_fpos_fabs(m*readStop-m*readStart+s1))-c;
203 return(1.0/s1*(readStop-readStart));
/dports/math/R-cran-terra/terra/src/
H A Darith.cpp186 readStop(); in arith()
224 readStop(); in arith()
249 readStop(); in arith()
324 readStop(); in arith()
365 readStop(); in arith()
452 readStop(); in arith()
523 readStop(); in math()
560 readStop(); in math2()
640 readStop(); in trig()
676 readStop(); in atan_2()
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H A Draster_methods.cpp335 readStop(); in aggregate()
346 readStop(); in aggregate()
416 readStop(); in separate()
445 readStop(); in separate()
505 readStop(); in is_in()
558 readStop(); in is_in_cells()
643 readStop(); in stretch()
710 readStop(); in apply()
776 readStop(); in mask()
854 readStop(); in mask()
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H A Draster_stats.cpp101 readStop(); in freq()
152 readStop(); in count()
187 readStop(); in quantile()
209 readStop(); in quantile()
295 readStop(); in unique()
503 readStop(); in zonal()
504 z.readStop(); in zonal()
H A Dread.cpp46 bool SpatRaster::readStop() { in readStop() function in SpatRaster
256 readStop(); in readAll()
282 readStop(); in getValues()
332 readStop(); in getValuesSource()
/dports/biology/bbmap/bbmap/current/var/
H A DVarlet.java37 readStop=readStop_; in Varlet()
62 assert(readStart<readStop) : this; in Varlet()
116 sb.append(readStop).append('\t');
172 int readStop=Integer.parseInt(split[3]);
208 mapScore, errors, expectedErrors, paired, readID, readLen, readStart, readStop, numReads,
260 if(readStop!=other.readStop){return readStop-other.readStop;}
329 public int readStop;
/dports/math/R-cran-raster/raster/R/
H A Dmean.R22 x <- readStop(x)
66 x <- readStop(x)
93 x <- readStop(x)
125 x <- readStop(x)
149 x <- readStop(x)
201 x <- readStop(x)
231 x <- readStop(x)
253 x <- readStop(x)
H A Dmath.R45 x <- readStop(x)
66 x <- readStop(x)
92 x <- readStop(x)
134 x <- readStop(x)
172 x <- readStop(x)
H A Darith.R78 e1 <- readStop(e1)
79 e2 <- readStop(e2)
123 e1 <- readStop(e1)
165 e2 <- readStop(e2)
219 e1 <- readStop(e1)
243 e1 <- readStop(e1)
282 e2 <- readStop(e2)
306 e2 <- readStop(e2)
H A Dmedian.R43 x <- readStop(x)
70 x <- readStop(x)
H A DsetMinMax.R32 x <- readStop(x)
84 x <- readStop(x)
H A Dwhich.max.R68 x <- readStop(x)
103 x <- readStop(x)
H A Dzonal.R154 x <- readStop(x)
155 z <- readStop(z)
304 x <- readStop(x)
305 z <- readStop(z)
H A Dwhiches.max.R57 x <- readStop(x)
104 x <- readStop(x)
/dports/math/R-cran-raster/raster/man/
H A Dprogramming.Rd4 \alias{readStop}
7 \alias{readStop,Raster-method}
8 \alias{readStop,RasterStack-method}
24 readStart opens file connection(s) for reading, readStop removes it.
35 readStop(x)
/dports/math/R-cran-terra/terra/R/
H A Dread.R46 success <- x@ptr$readStop()
54 success <- x@ptr$readStop()
/dports/math/R-cran-terra/terra/man/
H A Dreadwrite.Rd6 \alias{readStop}
15 \alias{readStop,SpatRaster-method}
17 \alias{readStop,SpatRasterDataset-method}
34 \S4method{readStop}{SpatRaster}(x)
/dports/biology/bbmap/bbmap/current/aligner/
H A DMultiStateAligner9PacBioAdapter.java994 int readStop=read.length;
1006 readStop-=dif;
1013 for(int i=readStart; i<readStop; i++){
1060 int readStop=read.length;
1071 readStop-=dif;
1127 int readStop=read.length;
1136 readStop-=dif;
1139 assert(refStart+readStop<=ref.length) : "readStart="+readStart+", readStop="+readStop+
1202 int readStop=read.length;
1211 readStop-=dif;
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H A DMultiStateAligner9PacBioAdapter2.java1177 int readStop=read.length;
1189 readStop-=dif;
1196 for(int i=readStart; i<readStop; i++){
1243 int readStop=read.length;
1254 readStop-=dif;
1310 int readStop=read.length;
1319 readStop-=dif;
1322 assert(refStart+readStop<=ref.length) : "readStart="+readStart+", readStop="+readStop+
1385 int readStop=read.length;
1394 readStop-=dif;
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H A DMultiStateAligner9PacBioAdapter3.java1000 int readStop=read.length; in scoreNoIndels() local
1012 readStop-=dif; in scoreNoIndels()
1019 for(int i=readStart; i<readStop; i++){ in scoreNoIndels()
1066 int readStop=read.length; in scoreNoIndels() local
1077 readStop-=dif; in scoreNoIndels()
1133 int readStop=read.length; in scoreNoIndelsAndMakeMatchString() local
1142 readStop-=dif; in scoreNoIndelsAndMakeMatchString()
1145 assert(refStart+readStop<=ref.length) : "readStart="+readStart+", readStop="+readStop+ in scoreNoIndelsAndMakeMatchString()
1208 int readStop=read.length; in scoreNoIndelsAndMakeMatchString() local
1217 readStop-=dif; in scoreNoIndelsAndMakeMatchString()
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H A DMultiStateAligner9PacBioAdapter_WithBarriers.java1979 int readStop=read.length;
1991 readStop-=dif;
1998 for(int i=readStart; i<readStop; i++){
2045 int readStop=read.length;
2056 readStop-=dif;
2112 int readStop=read.length;
2121 readStop-=dif;
2124 assert(refStart+readStop<=ref.length) : "readStart="+readStart+", readStop="+readStop+
2187 int readStop=read.length;
2196 readStop-=dif;
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/dports/biology/bbmap/bbmap/current/align2/
H A DMultiStateAligner11tsJNI.java1002 int readStop=read.length;
1014 readStop-=dif;
1019 for(int i=readStart; i<readStop; i++){
1084 int readStop=read.length;
1095 readStop-=dif;
1144 int readStop=read.length;
1154 readStop-=dif;
1157 assert(refStart+readStop<=ref.length) : "readStart="+readStart+", readStop="+readStop+
1215 int readStop=read.length;
1225 readStop-=dif;
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H A DMultiStateAligner11ts.java1942 int readStop=read.length;
1954 readStop-=dif;
1961 for(int i=readStart; i<readStop; i++){
2033 int readStop=read.length;
2044 readStop-=dif;
2102 int readStop=read.length;
2112 readStop-=dif;
2115 assert(refStart+readStop<=ref.length) : "readStart="+readStart+", readStop="+readStop+
2179 int readStop=read.length;
2189 readStop-=dif;
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H A DMultiStateAligner9XFlat.java1791 int readStop=read.length;
1803 readStop-=dif;
1810 for(int i=readStart; i<readStop; i++){
1879 int readStop=read.length;
1890 readStop-=dif;
1945 int readStop=read.length;
1955 readStop-=dif;
1958 assert(refStart+readStop<=ref.length) : "readStart="+readStart+", readStop="+readStop+
2019 int readStop=read.length;
2029 readStop-=dif;
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H A DMultiStateAligner9ts.java1822 int readStop=read.length;
1834 readStop-=dif;
1841 for(int i=readStart; i<readStop; i++){
1912 int readStop=read.length;
1923 readStop-=dif;
1980 int readStop=read.length;
1990 readStop-=dif;
1993 assert(refStart+readStop<=ref.length) : "readStart="+readStart+", readStop="+readStop+
2056 int readStop=read.length;
2066 readStop-=dif;
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