Searched refs:read_main_strand (Results 1 – 2 of 2) sorted by relevance
332 char read_main_strand = (((FLAG & 0x40)==0x40) == ((FLAG & 0x10) == 0x10 ))?'-':'+'; in RSubread_parse_CIGAR_Extra_string() local366 if(current_fusion_strand!=read_main_strand) in RSubread_parse_CIGAR_Extra_string()
488 char read_main_strand = (((flag & 0x10) == 0x10) == ((flag & 0x40)==0x40))?'-':'+'; in calc_junctions_from_cigar() local520 if(current_fusion_strand!=read_main_strand) in calc_junctions_from_cigar()