Searched refs:recomb_highci (Results 1 – 1 of 1) sorted by relevance
| /dports/biology/plink/plink-ng-79b2df8c/1.9/ |
| H A D | plink_ld.c | 6792 …fy(uint32_t* counts, uint32_t lowci_max, uint32_t lowci_min, uint32_t recomb_highci, uint32_t stro… in haploview_blocks_classify() argument
6907 for (quantile = strong_highci - 1; quantile >= recomb_highci; quantile--) { in haploview_blocks_classify()
6991 …n21, known22, unknown_dh, freqx1, freq1x, freq2x, freq11_expected, denom, recomb_highci) - lnlike1; in haploview_blocks_classify()
6992 if ((center < recomb_highci) && (dxx < recomb_fast_ln_thresh)) { in haploview_blocks_classify()
7000 } while (--quantile > recomb_highci); in haploview_blocks_classify()
7005 if (center < recomb_highci) { in haploview_blocks_classify()
7038 for (quantile = 100; quantile >= recomb_highci; quantile--) { in haploview_blocks_classify()
7112 uint32_t recomb_highci = ldip->blocks_recomb_highci; in haploview_blocks() local
7120 double recomb_fast_ln_thresh = -log((int32_t)((100 - recomb_highci) * 20)); in haploview_blocks()
7468 …cur_ci_type = haploview_blocks_classify(counts, lowci_max, lowci_min, recomb_highci, strong_highci… in haploview_blocks()
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