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/dports/biology/freebayes/freebayes-1.3.5/contrib/htslib/cram/
H A Dcram_index.c166 idx->refid = -1; in cram_index_load()
249 if (e.refid != idx->refid) { in cram_index_load()
265 idx->refid = e.refid; in cram_index_load()
369 switch(refid) { in cram_index_query()
376 refid = -1; in cram_index_query()
394 if (refid < HTS_IDX_NONE || refid+1 >= fd->index_sz) in cram_index_query()
409 if (from->e[k].refid > refid) { in cram_index_query()
414 if (from->e[k].refid < refid) { in cram_index_query()
430 if (j >= 0 && from->e[j].start < pos && from->e[j].refid == refid) in cram_index_query()
439 (from->e[i].refid < refid || in cram_index_query()
[all …]
/dports/biology/py-pysam/pysam-0.18.0/htslib/cram/
H A Dcram_index.c166 idx->refid = -1; in cram_index_load()
249 if (e.refid != idx->refid) { in cram_index_load()
265 idx->refid = e.refid; in cram_index_load()
369 switch(refid) { in cram_index_query()
376 refid = -1; in cram_index_query()
394 if (refid < HTS_IDX_NONE || refid+1 >= fd->index_sz) in cram_index_query()
409 if (from->e[k].refid > refid) { in cram_index_query()
414 if (from->e[k].refid < refid) { in cram_index_query()
430 if (j >= 0 && from->e[j].start < pos && from->e[j].refid == refid) in cram_index_query()
439 (from->e[i].refid < refid || in cram_index_query()
[all …]
/dports/biology/htslib/htslib-1.14/cram/
H A Dcram_index.c166 idx->refid = -1; in cram_index_load()
249 if (e.refid != idx->refid) { in cram_index_load()
265 idx->refid = e.refid; in cram_index_load()
369 switch(refid) { in cram_index_query()
376 refid = -1; in cram_index_query()
394 if (refid < HTS_IDX_NONE || refid+1 >= fd->index_sz) in cram_index_query()
409 if (from->e[k].refid > refid) { in cram_index_query()
414 if (from->e[k].refid < refid) { in cram_index_query()
430 if (j >= 0 && from->e[j].start < pos && from->e[j].refid == refid) in cram_index_query()
439 (from->e[i].refid < refid || in cram_index_query()
[all …]
/dports/databases/py-xapian/xapian-bindings-1.4.18/ruby/
H A Dgenerate-rdoc-stubs34 my $refid = $1;
35 if ($refid !~ m![/.]!) {
36 $id{$refid} = $class;
38 print STDERR "Bad refid: $refid\n";
47 for my $refid (sort keys %id) {
49 open F, '<', "$dir/$refid.xml";
51 if (/<compounddef id="\Q$refid\E" kind="class" prot="(\w+)"/) {
57 if ($refid =~ /^struct/ || (defined $prot && $prot eq 'public')) {
58 my $class = $id{$refid};
66 print STDERR "No prot found for $refid\n";
/dports/databases/xapian-bindings12/xapian-bindings-1.2.25/ruby/
H A Dgenerate-rdoc-stubs34 my $refid = $1;
35 if ($refid !~ m![/.]!) {
36 $id{$refid} = $class;
38 print STDERR "Bad refid: $refid\n";
47 for my $refid (sort keys %id) {
49 open F, '<', "$dir/$refid.xml";
51 if (/<compounddef id="\Q$refid\E" kind="class" prot="(\w+)"/) {
57 if ($refid =~ /^struct/ || (defined $prot && $prot eq 'public')) {
58 my $class = $id{$refid};
66 print STDERR "No prot found for $refid\n";
/dports/databases/p5-Xapian/xapian-bindings-1.4.18/ruby/
H A Dgenerate-rdoc-stubs34 my $refid = $1;
35 if ($refid !~ m![/.]!) {
36 $id{$refid} = $class;
38 print STDERR "Bad refid: $refid\n";
47 for my $refid (sort keys %id) {
49 open F, '<', "$dir/$refid.xml";
51 if (/<compounddef id="\Q$refid\E" kind="class" prot="(\w+)"/) {
57 if ($refid =~ /^struct/ || (defined $prot && $prot eq 'public')) {
58 my $class = $id{$refid};
66 print STDERR "No prot found for $refid\n";
/dports/databases/php-xapian/xapian-bindings-1.4.18/ruby/
H A Dgenerate-rdoc-stubs34 my $refid = $1;
35 if ($refid !~ m![/.]!) {
36 $id{$refid} = $class;
38 print STDERR "Bad refid: $refid\n";
47 for my $refid (sort keys %id) {
49 open F, '<', "$dir/$refid.xml";
51 if (/<compounddef id="\Q$refid\E" kind="class" prot="(\w+)"/) {
57 if ($refid =~ /^struct/ || (defined $prot && $prot eq 'public')) {
58 my $class = $id{$refid};
66 print STDERR "No prot found for $refid\n";
/dports/databases/lua-xapian/xapian-bindings-1.4.18/ruby/
H A Dgenerate-rdoc-stubs34 my $refid = $1;
35 if ($refid !~ m![/.]!) {
36 $id{$refid} = $class;
38 print STDERR "Bad refid: $refid\n";
47 for my $refid (sort keys %id) {
49 open F, '<', "$dir/$refid.xml";
51 if (/<compounddef id="\Q$refid\E" kind="class" prot="(\w+)"/) {
57 if ($refid =~ /^struct/ || (defined $prot && $prot eq 'public')) {
58 my $class = $id{$refid};
66 print STDERR "No prot found for $refid\n";
/dports/biology/stacks/stacks-2.4/htslib/cram/
H A Dcram_index.c159 idx->refid = -1; in cram_index_load()
239 if (e.refid != idx->refid) { in cram_index_load()
255 idx->refid = e.refid; in cram_index_load()
359 switch(refid) { in cram_index_query()
366 refid = -1; in cram_index_query()
383 if (refid < HTS_IDX_NONE || refid+1 >= fd->index_sz) in cram_index_query()
398 if (from->e[k].refid > refid) { in cram_index_query()
403 if (from->e[k].refid < refid) { in cram_index_query()
428 (from->e[i].refid < refid || in cram_index_query()
441 if (refid+1 < 0 || refid+1 >= fd->index_sz) in cram_index_last()
[all …]
/dports/multimedia/librespot/librespot-0.1.3/cargo-crates/stdweb-0.1.3/src/webcore/
H A Dinitialization.rs143 HEAP32[ address / 4 ] = refid; in initialize()
203 if( refid === undefined ) { in initialize()
207 if( refid === undefined ) { in initialize()
208 refid = last_refid++; in initialize()
215 id_to_refcount_map[ refid ] = 1; in initialize()
217 id_to_refcount_map[ refid ]++; in initialize()
220 return refid; in initialize()
224 return id_to_ref_map[ refid ]; in initialize()
228 id_to_refcount_map[ refid ]++; in initialize()
232 id_to_refcount_map[ refid ]--; in initialize()
[all …]
/dports/sysutils/czkawka/czkawka-3.3.1/cargo-crates/stdweb-0.1.3/src/webcore/
H A Dinitialization.rs143 HEAP32[ address / 4 ] = refid; in initialize()
203 if( refid === undefined ) { in initialize()
207 if( refid === undefined ) { in initialize()
208 refid = last_refid++; in initialize()
215 id_to_refcount_map[ refid ] = 1; in initialize()
217 id_to_refcount_map[ refid ]++; in initialize()
220 return refid; in initialize()
224 return id_to_ref_map[ refid ]; in initialize()
228 id_to_refcount_map[ refid ]++; in initialize()
232 id_to_refcount_map[ refid ]--; in initialize()
[all …]
/dports/audio/ncspot/ncspot-0.9.3/cargo-crates/stdweb-0.1.3/src/webcore/
H A Dinitialization.rs143 HEAP32[ address / 4 ] = refid; in initialize()
203 if( refid === undefined ) { in initialize()
207 if( refid === undefined ) { in initialize()
208 refid = last_refid++; in initialize()
215 id_to_refcount_map[ refid ] = 1; in initialize()
217 id_to_refcount_map[ refid ]++; in initialize()
220 return refid; in initialize()
224 return id_to_ref_map[ refid ]; in initialize()
228 id_to_refcount_map[ refid ]++; in initialize()
232 id_to_refcount_map[ refid ]--; in initialize()
[all …]
/dports/audio/spotifyd/spotifyd-0.3.0/cargo-crates/stdweb-0.1.3/src/webcore/
H A Dinitialization.rs143 HEAP32[ address / 4 ] = refid;
203 if( refid === undefined ) {
207 if( refid === undefined ) {
208 refid = last_refid++;
215 id_to_refcount_map[ refid ] = 1;
217 id_to_refcount_map[ refid ]++;
220 return refid;
224 return id_to_ref_map[ refid ];
228 id_to_refcount_map[ refid ]++;
232 id_to_refcount_map[ refid ]--;
[all …]
/dports/biology/vt/vt-0.57721/lib/htslib/cram/
H A Dcram_index.c159 idx->refid = -1; in cram_index_load()
239 if (e.refid != idx->refid) { in cram_index_load()
255 idx->refid = e.refid; in cram_index_load()
359 switch(refid) { in cram_index_query()
366 refid = -1; in cram_index_query()
383 if (refid < HTS_IDX_NONE || refid+1 >= fd->index_sz) in cram_index_query()
398 if (from->e[k].refid > refid) { in cram_index_query()
403 if (from->e[k].refid < refid) { in cram_index_query()
428 (from->e[i].refid < refid || in cram_index_query()
441 if (refid+1 < 0 || refid+1 >= fd->index_sz) in cram_index_last()
[all …]
/dports/biology/bedtools/bedtools2-2.30.0/src/utils/htslib/cram/
H A Dcram_index.c159 idx->refid = -1; in cram_index_load()
239 if (e.refid != idx->refid) { in cram_index_load()
255 idx->refid = e.refid; in cram_index_load()
359 switch(refid) { in cram_index_query()
366 refid = -1; in cram_index_query()
383 if (refid < HTS_IDX_NONE || refid+1 >= fd->index_sz) in cram_index_query()
398 if (from->e[k].refid > refid) { in cram_index_query()
403 if (from->e[k].refid < refid) { in cram_index_query()
428 (from->e[i].refid < refid || in cram_index_query()
441 if (refid+1 < 0 || refid+1 >= fd->index_sz) in cram_index_last()
[all …]
/dports/science/gromacs/gromacs-2021.4/src/gromacs/selection/
H A Dsm_merge.cpp310 int refid; in evaluate_merge() local
322 refid = d->p1.m.refid[d->stride * i + j]; in evaluate_merge()
323 if (refid != -1) in evaluate_merge()
325 refid = (d->stride + 1) * (refid / d->stride) + (refid % d->stride); in evaluate_merge()
329 refid = (d->stride + 1) * d->p2.m.refid[i] + d->stride; in evaluate_merge()
330 gmx_ana_pos_append(out->u.p, &d->p2, i, refid); in evaluate_merge()
342 int refid; in evaluate_plus() local
347 refid = d->p1.m.refid[i]; in evaluate_plus()
352 refid = d->p2.m.refid[i]; in evaluate_plus()
353 if (refid != -1) in evaluate_plus()
[all …]
/dports/databases/p5-Tangram/Tangram-2.12/lib/Tangram/Lazy/
H A DRef.pm16 my ($storage, $id, $member, $refid) = @$self;
20 print $Tangram::TRACE "demanding $id.$member".(defined $storage->{objects}{$refid}
24 $refobj = $storage->load($refid);
28 print $Tangram::TRACE "demanding obj $refid".(defined $storage->{objects}{$refid}
32 $refobj = $$member = $storage->load($refid);
41 my ($storage, $id, $member, $refid) = @$self;
54 my ($storage, $id, $member, $refid) = @{shift()};
55 $refid;
/dports/comms/uhd/uhd-90ce6062b6b5df2eddeee723777be85108e4e7c7/tools/gr-usrptest/docs/doxygen/doxyxml/
H A Dbase.py65 def from_refid(cls, refid, top=None): argument
68 if top is not None and refid in top._refs:
69 return top._refs[refid]
72 inst.refid = refid
78 refid = getattr(parse_data, 'refid', None)
79 if refid is not None and top is not None and refid in top._refs:
80 return top._refs[refid]
82 if refid is not None:
83 inst.refid = refid
89 self.top._refs[obj.refid] = obj
[all …]
/dports/biology/iolib/io_lib-io_lib-1-14-10/io_lib/
H A Dcram_index.c123 idx->refid = -1; in cram_index_load_private()
149 if (e.refid < -1) { in cram_index_load_private()
154 if (e.refid != idx->refid) { in cram_index_load_private()
157 fd->index_sz = e.refid+2; in cram_index_load_private()
164 idx->refid = e.refid; in cram_index_load_private()
323 if (refid+1 < 0 || refid+1 >= fd->index_sz) in cram_index_query()
327 from = &fd->index[refid+1]; in cram_index_query()
337 if (from->e[k].refid > refid) { in cram_index_query()
342 if (from->e[k].refid < refid) { in cram_index_query()
358 if (j >= 0 && from->e[j].start < pos && from->e[j].refid == refid) in cram_index_query()
[all …]
/dports/biology/kallisto/kallisto-0.46.1/ext/htslib/cram/
H A Dcram_index.c159 idx->refid = -1; in cram_index_load()
234 if (e.refid < -1) { in cram_index_load()
239 if (e.refid != idx->refid) { in cram_index_load()
254 idx = &fd->index[e.refid+1]; in cram_index_load()
255 idx->refid = e.refid; in cram_index_load()
356 if (refid+1 < 0 || refid+1 >= fd->index_sz) in cram_index_query()
360 from = &fd->index[refid+1]; in cram_index_query()
370 if (from->e[k].refid > refid) { in cram_index_query()
375 if (from->e[k].refid < refid) { in cram_index_query()
391 if (j >= 0 && from->e[j].start < pos && from->e[j].refid == refid) in cram_index_query()
[all …]
/dports/devel/doxygen/doxygen-1.9.3/src/
H A Dsqlite3gen.cpp942 QCString refid; member
950 ret.refid=refid; in insertRefid()
952 if (refid.isEmpty()) return ret; in insertRefid()
1540 if(!refid.created && memberdefExists(refid) && memberdefIncomplete(refid, md)) in generateSqlite3ForMember()
1901 if(!refid.created && compounddefExists(refid)){return;} in generateSqlite3ForClass()
2025 if(!refid.created && compounddefExists(refid)){return;} in generateSqlite3ForConcept()
2058 if(!refid.created && compounddefExists(refid)){return;} in generateSqlite3ForNamespace()
2118 if(!refid.created && compounddefExists(refid)){return;} in generateSqlite3ForFile()
2262 if(!refid.created && compounddefExists(refid)){return;} in generateSqlite3ForGroup()
2322 if(!refid.created && compounddefExists(refid)){return;} in generateSqlite3ForDir()
[all …]
/dports/games/zdoom/zdoom-2.8.1/src/
H A Ds_advsound.cpp185 int refid; member
345 return refid; in S_PickReplacement()
1142 int gender, refid; in S_AddSNDINFO() local
1156 int gender, refid; in S_AddSNDINFO() local
1495 if (refid != 0 && !S_sfx[refid].bPlayerReserve && !S_sfx[refid].bTentative) in S_ParsePlayerSoundCommon()
1499 if (refid == 0) in S_ParsePlayerSoundCommon()
1646 if (refid != 0) in S_LookupPlayerSound()
1648 refid = S_LookupPlayerSound (pclass, gender, refid); in S_LookupPlayerSound()
1650 return refid; in S_LookupPlayerSound()
1657 return refid; in S_LookupPlayerSound()
[all …]
/dports/comms/gr-osmosdr/gr-osmosdr-0.2.3/docs/doxygen/doxyxml/
H A Dbase.py68 def from_refid(cls, refid, top=None): argument
71 if top is not None and refid in top._refs:
72 return top._refs[refid]
75 inst.refid = refid
81 refid = getattr(parse_data, 'refid', None)
82 if refid is not None and top is not None and refid in top._refs:
83 return top._refs[refid]
85 if refid is not None:
86 inst.refid = refid
92 self.top._refs[obj.refid] = obj
[all …]
/dports/comms/gnuradio/gnuradio-3.8.4.0/gr-utils/python/modtool/templates/gr-newmod/docs/doxygen/doxyxml/
H A Dbase.py68 def from_refid(cls, refid, top=None): argument
71 if top is not None and refid in top._refs:
72 return top._refs[refid]
75 inst.refid = refid
81 refid = getattr(parse_data, 'refid', None)
82 if refid is not None and top is not None and refid in top._refs:
83 return top._refs[refid]
85 if refid is not None:
86 inst.refid = refid
92 self.top._refs[obj.refid] = obj
[all …]
/dports/comms/gnuradio/gnuradio-3.8.4.0/docs/doxygen/doxyxml/
H A Dbase.py68 def from_refid(cls, refid, top=None): argument
71 if top is not None and refid in top._refs:
72 return top._refs[refid]
75 inst.refid = refid
81 refid = getattr(parse_data, 'refid', None)
82 if refid is not None and top is not None and refid in top._refs:
83 return top._refs[refid]
85 if refid is not None:
86 inst.refid = refid
92 self.top._refs[obj.refid] = obj
[all …]

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