/dports/biology/freebayes/freebayes-1.3.5/contrib/htslib/cram/ |
H A D | cram_index.c | 166 idx->refid = -1; in cram_index_load() 249 if (e.refid != idx->refid) { in cram_index_load() 265 idx->refid = e.refid; in cram_index_load() 369 switch(refid) { in cram_index_query() 376 refid = -1; in cram_index_query() 394 if (refid < HTS_IDX_NONE || refid+1 >= fd->index_sz) in cram_index_query() 409 if (from->e[k].refid > refid) { in cram_index_query() 414 if (from->e[k].refid < refid) { in cram_index_query() 430 if (j >= 0 && from->e[j].start < pos && from->e[j].refid == refid) in cram_index_query() 439 (from->e[i].refid < refid || in cram_index_query() [all …]
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/dports/biology/py-pysam/pysam-0.18.0/htslib/cram/ |
H A D | cram_index.c | 166 idx->refid = -1; in cram_index_load() 249 if (e.refid != idx->refid) { in cram_index_load() 265 idx->refid = e.refid; in cram_index_load() 369 switch(refid) { in cram_index_query() 376 refid = -1; in cram_index_query() 394 if (refid < HTS_IDX_NONE || refid+1 >= fd->index_sz) in cram_index_query() 409 if (from->e[k].refid > refid) { in cram_index_query() 414 if (from->e[k].refid < refid) { in cram_index_query() 430 if (j >= 0 && from->e[j].start < pos && from->e[j].refid == refid) in cram_index_query() 439 (from->e[i].refid < refid || in cram_index_query() [all …]
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/dports/biology/htslib/htslib-1.14/cram/ |
H A D | cram_index.c | 166 idx->refid = -1; in cram_index_load() 249 if (e.refid != idx->refid) { in cram_index_load() 265 idx->refid = e.refid; in cram_index_load() 369 switch(refid) { in cram_index_query() 376 refid = -1; in cram_index_query() 394 if (refid < HTS_IDX_NONE || refid+1 >= fd->index_sz) in cram_index_query() 409 if (from->e[k].refid > refid) { in cram_index_query() 414 if (from->e[k].refid < refid) { in cram_index_query() 430 if (j >= 0 && from->e[j].start < pos && from->e[j].refid == refid) in cram_index_query() 439 (from->e[i].refid < refid || in cram_index_query() [all …]
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/dports/databases/py-xapian/xapian-bindings-1.4.18/ruby/ |
H A D | generate-rdoc-stubs | 34 my $refid = $1; 35 if ($refid !~ m![/.]!) { 36 $id{$refid} = $class; 38 print STDERR "Bad refid: $refid\n"; 47 for my $refid (sort keys %id) { 49 open F, '<', "$dir/$refid.xml"; 51 if (/<compounddef id="\Q$refid\E" kind="class" prot="(\w+)"/) { 57 if ($refid =~ /^struct/ || (defined $prot && $prot eq 'public')) { 58 my $class = $id{$refid}; 66 print STDERR "No prot found for $refid\n";
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/dports/databases/xapian-bindings12/xapian-bindings-1.2.25/ruby/ |
H A D | generate-rdoc-stubs | 34 my $refid = $1; 35 if ($refid !~ m![/.]!) { 36 $id{$refid} = $class; 38 print STDERR "Bad refid: $refid\n"; 47 for my $refid (sort keys %id) { 49 open F, '<', "$dir/$refid.xml"; 51 if (/<compounddef id="\Q$refid\E" kind="class" prot="(\w+)"/) { 57 if ($refid =~ /^struct/ || (defined $prot && $prot eq 'public')) { 58 my $class = $id{$refid}; 66 print STDERR "No prot found for $refid\n";
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/dports/databases/p5-Xapian/xapian-bindings-1.4.18/ruby/ |
H A D | generate-rdoc-stubs | 34 my $refid = $1; 35 if ($refid !~ m![/.]!) { 36 $id{$refid} = $class; 38 print STDERR "Bad refid: $refid\n"; 47 for my $refid (sort keys %id) { 49 open F, '<', "$dir/$refid.xml"; 51 if (/<compounddef id="\Q$refid\E" kind="class" prot="(\w+)"/) { 57 if ($refid =~ /^struct/ || (defined $prot && $prot eq 'public')) { 58 my $class = $id{$refid}; 66 print STDERR "No prot found for $refid\n";
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/dports/databases/php-xapian/xapian-bindings-1.4.18/ruby/ |
H A D | generate-rdoc-stubs | 34 my $refid = $1; 35 if ($refid !~ m![/.]!) { 36 $id{$refid} = $class; 38 print STDERR "Bad refid: $refid\n"; 47 for my $refid (sort keys %id) { 49 open F, '<', "$dir/$refid.xml"; 51 if (/<compounddef id="\Q$refid\E" kind="class" prot="(\w+)"/) { 57 if ($refid =~ /^struct/ || (defined $prot && $prot eq 'public')) { 58 my $class = $id{$refid}; 66 print STDERR "No prot found for $refid\n";
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/dports/databases/lua-xapian/xapian-bindings-1.4.18/ruby/ |
H A D | generate-rdoc-stubs | 34 my $refid = $1; 35 if ($refid !~ m![/.]!) { 36 $id{$refid} = $class; 38 print STDERR "Bad refid: $refid\n"; 47 for my $refid (sort keys %id) { 49 open F, '<', "$dir/$refid.xml"; 51 if (/<compounddef id="\Q$refid\E" kind="class" prot="(\w+)"/) { 57 if ($refid =~ /^struct/ || (defined $prot && $prot eq 'public')) { 58 my $class = $id{$refid}; 66 print STDERR "No prot found for $refid\n";
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/dports/biology/stacks/stacks-2.4/htslib/cram/ |
H A D | cram_index.c | 159 idx->refid = -1; in cram_index_load() 239 if (e.refid != idx->refid) { in cram_index_load() 255 idx->refid = e.refid; in cram_index_load() 359 switch(refid) { in cram_index_query() 366 refid = -1; in cram_index_query() 383 if (refid < HTS_IDX_NONE || refid+1 >= fd->index_sz) in cram_index_query() 398 if (from->e[k].refid > refid) { in cram_index_query() 403 if (from->e[k].refid < refid) { in cram_index_query() 428 (from->e[i].refid < refid || in cram_index_query() 441 if (refid+1 < 0 || refid+1 >= fd->index_sz) in cram_index_last() [all …]
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/dports/multimedia/librespot/librespot-0.1.3/cargo-crates/stdweb-0.1.3/src/webcore/ |
H A D | initialization.rs | 143 HEAP32[ address / 4 ] = refid; in initialize() 203 if( refid === undefined ) { in initialize() 207 if( refid === undefined ) { in initialize() 208 refid = last_refid++; in initialize() 215 id_to_refcount_map[ refid ] = 1; in initialize() 217 id_to_refcount_map[ refid ]++; in initialize() 220 return refid; in initialize() 224 return id_to_ref_map[ refid ]; in initialize() 228 id_to_refcount_map[ refid ]++; in initialize() 232 id_to_refcount_map[ refid ]--; in initialize() [all …]
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/dports/sysutils/czkawka/czkawka-3.3.1/cargo-crates/stdweb-0.1.3/src/webcore/ |
H A D | initialization.rs | 143 HEAP32[ address / 4 ] = refid; in initialize() 203 if( refid === undefined ) { in initialize() 207 if( refid === undefined ) { in initialize() 208 refid = last_refid++; in initialize() 215 id_to_refcount_map[ refid ] = 1; in initialize() 217 id_to_refcount_map[ refid ]++; in initialize() 220 return refid; in initialize() 224 return id_to_ref_map[ refid ]; in initialize() 228 id_to_refcount_map[ refid ]++; in initialize() 232 id_to_refcount_map[ refid ]--; in initialize() [all …]
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/dports/audio/ncspot/ncspot-0.9.3/cargo-crates/stdweb-0.1.3/src/webcore/ |
H A D | initialization.rs | 143 HEAP32[ address / 4 ] = refid; in initialize() 203 if( refid === undefined ) { in initialize() 207 if( refid === undefined ) { in initialize() 208 refid = last_refid++; in initialize() 215 id_to_refcount_map[ refid ] = 1; in initialize() 217 id_to_refcount_map[ refid ]++; in initialize() 220 return refid; in initialize() 224 return id_to_ref_map[ refid ]; in initialize() 228 id_to_refcount_map[ refid ]++; in initialize() 232 id_to_refcount_map[ refid ]--; in initialize() [all …]
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/dports/audio/spotifyd/spotifyd-0.3.0/cargo-crates/stdweb-0.1.3/src/webcore/ |
H A D | initialization.rs | 143 HEAP32[ address / 4 ] = refid; 203 if( refid === undefined ) { 207 if( refid === undefined ) { 208 refid = last_refid++; 215 id_to_refcount_map[ refid ] = 1; 217 id_to_refcount_map[ refid ]++; 220 return refid; 224 return id_to_ref_map[ refid ]; 228 id_to_refcount_map[ refid ]++; 232 id_to_refcount_map[ refid ]--; [all …]
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/dports/biology/vt/vt-0.57721/lib/htslib/cram/ |
H A D | cram_index.c | 159 idx->refid = -1; in cram_index_load() 239 if (e.refid != idx->refid) { in cram_index_load() 255 idx->refid = e.refid; in cram_index_load() 359 switch(refid) { in cram_index_query() 366 refid = -1; in cram_index_query() 383 if (refid < HTS_IDX_NONE || refid+1 >= fd->index_sz) in cram_index_query() 398 if (from->e[k].refid > refid) { in cram_index_query() 403 if (from->e[k].refid < refid) { in cram_index_query() 428 (from->e[i].refid < refid || in cram_index_query() 441 if (refid+1 < 0 || refid+1 >= fd->index_sz) in cram_index_last() [all …]
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/dports/biology/bedtools/bedtools2-2.30.0/src/utils/htslib/cram/ |
H A D | cram_index.c | 159 idx->refid = -1; in cram_index_load() 239 if (e.refid != idx->refid) { in cram_index_load() 255 idx->refid = e.refid; in cram_index_load() 359 switch(refid) { in cram_index_query() 366 refid = -1; in cram_index_query() 383 if (refid < HTS_IDX_NONE || refid+1 >= fd->index_sz) in cram_index_query() 398 if (from->e[k].refid > refid) { in cram_index_query() 403 if (from->e[k].refid < refid) { in cram_index_query() 428 (from->e[i].refid < refid || in cram_index_query() 441 if (refid+1 < 0 || refid+1 >= fd->index_sz) in cram_index_last() [all …]
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/dports/science/gromacs/gromacs-2021.4/src/gromacs/selection/ |
H A D | sm_merge.cpp | 310 int refid; in evaluate_merge() local 322 refid = d->p1.m.refid[d->stride * i + j]; in evaluate_merge() 323 if (refid != -1) in evaluate_merge() 325 refid = (d->stride + 1) * (refid / d->stride) + (refid % d->stride); in evaluate_merge() 329 refid = (d->stride + 1) * d->p2.m.refid[i] + d->stride; in evaluate_merge() 330 gmx_ana_pos_append(out->u.p, &d->p2, i, refid); in evaluate_merge() 342 int refid; in evaluate_plus() local 347 refid = d->p1.m.refid[i]; in evaluate_plus() 352 refid = d->p2.m.refid[i]; in evaluate_plus() 353 if (refid != -1) in evaluate_plus() [all …]
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/dports/databases/p5-Tangram/Tangram-2.12/lib/Tangram/Lazy/ |
H A D | Ref.pm | 16 my ($storage, $id, $member, $refid) = @$self; 20 print $Tangram::TRACE "demanding $id.$member".(defined $storage->{objects}{$refid} 24 $refobj = $storage->load($refid); 28 print $Tangram::TRACE "demanding obj $refid".(defined $storage->{objects}{$refid} 32 $refobj = $$member = $storage->load($refid); 41 my ($storage, $id, $member, $refid) = @$self; 54 my ($storage, $id, $member, $refid) = @{shift()}; 55 $refid;
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/dports/comms/uhd/uhd-90ce6062b6b5df2eddeee723777be85108e4e7c7/tools/gr-usrptest/docs/doxygen/doxyxml/ |
H A D | base.py | 65 def from_refid(cls, refid, top=None): argument 68 if top is not None and refid in top._refs: 69 return top._refs[refid] 72 inst.refid = refid 78 refid = getattr(parse_data, 'refid', None) 79 if refid is not None and top is not None and refid in top._refs: 80 return top._refs[refid] 82 if refid is not None: 83 inst.refid = refid 89 self.top._refs[obj.refid] = obj [all …]
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/dports/biology/iolib/io_lib-io_lib-1-14-10/io_lib/ |
H A D | cram_index.c | 123 idx->refid = -1; in cram_index_load_private() 149 if (e.refid < -1) { in cram_index_load_private() 154 if (e.refid != idx->refid) { in cram_index_load_private() 157 fd->index_sz = e.refid+2; in cram_index_load_private() 164 idx->refid = e.refid; in cram_index_load_private() 323 if (refid+1 < 0 || refid+1 >= fd->index_sz) in cram_index_query() 327 from = &fd->index[refid+1]; in cram_index_query() 337 if (from->e[k].refid > refid) { in cram_index_query() 342 if (from->e[k].refid < refid) { in cram_index_query() 358 if (j >= 0 && from->e[j].start < pos && from->e[j].refid == refid) in cram_index_query() [all …]
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/dports/biology/kallisto/kallisto-0.46.1/ext/htslib/cram/ |
H A D | cram_index.c | 159 idx->refid = -1; in cram_index_load() 234 if (e.refid < -1) { in cram_index_load() 239 if (e.refid != idx->refid) { in cram_index_load() 254 idx = &fd->index[e.refid+1]; in cram_index_load() 255 idx->refid = e.refid; in cram_index_load() 356 if (refid+1 < 0 || refid+1 >= fd->index_sz) in cram_index_query() 360 from = &fd->index[refid+1]; in cram_index_query() 370 if (from->e[k].refid > refid) { in cram_index_query() 375 if (from->e[k].refid < refid) { in cram_index_query() 391 if (j >= 0 && from->e[j].start < pos && from->e[j].refid == refid) in cram_index_query() [all …]
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/dports/devel/doxygen/doxygen-1.9.3/src/ |
H A D | sqlite3gen.cpp | 942 QCString refid; member 950 ret.refid=refid; in insertRefid() 952 if (refid.isEmpty()) return ret; in insertRefid() 1540 if(!refid.created && memberdefExists(refid) && memberdefIncomplete(refid, md)) in generateSqlite3ForMember() 1901 if(!refid.created && compounddefExists(refid)){return;} in generateSqlite3ForClass() 2025 if(!refid.created && compounddefExists(refid)){return;} in generateSqlite3ForConcept() 2058 if(!refid.created && compounddefExists(refid)){return;} in generateSqlite3ForNamespace() 2118 if(!refid.created && compounddefExists(refid)){return;} in generateSqlite3ForFile() 2262 if(!refid.created && compounddefExists(refid)){return;} in generateSqlite3ForGroup() 2322 if(!refid.created && compounddefExists(refid)){return;} in generateSqlite3ForDir() [all …]
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/dports/games/zdoom/zdoom-2.8.1/src/ |
H A D | s_advsound.cpp | 185 int refid; member 345 return refid; in S_PickReplacement() 1142 int gender, refid; in S_AddSNDINFO() local 1156 int gender, refid; in S_AddSNDINFO() local 1495 if (refid != 0 && !S_sfx[refid].bPlayerReserve && !S_sfx[refid].bTentative) in S_ParsePlayerSoundCommon() 1499 if (refid == 0) in S_ParsePlayerSoundCommon() 1646 if (refid != 0) in S_LookupPlayerSound() 1648 refid = S_LookupPlayerSound (pclass, gender, refid); in S_LookupPlayerSound() 1650 return refid; in S_LookupPlayerSound() 1657 return refid; in S_LookupPlayerSound() [all …]
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/dports/comms/gr-osmosdr/gr-osmosdr-0.2.3/docs/doxygen/doxyxml/ |
H A D | base.py | 68 def from_refid(cls, refid, top=None): argument 71 if top is not None and refid in top._refs: 72 return top._refs[refid] 75 inst.refid = refid 81 refid = getattr(parse_data, 'refid', None) 82 if refid is not None and top is not None and refid in top._refs: 83 return top._refs[refid] 85 if refid is not None: 86 inst.refid = refid 92 self.top._refs[obj.refid] = obj [all …]
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/dports/comms/gnuradio/gnuradio-3.8.4.0/gr-utils/python/modtool/templates/gr-newmod/docs/doxygen/doxyxml/ |
H A D | base.py | 68 def from_refid(cls, refid, top=None): argument 71 if top is not None and refid in top._refs: 72 return top._refs[refid] 75 inst.refid = refid 81 refid = getattr(parse_data, 'refid', None) 82 if refid is not None and top is not None and refid in top._refs: 83 return top._refs[refid] 85 if refid is not None: 86 inst.refid = refid 92 self.top._refs[obj.refid] = obj [all …]
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/dports/comms/gnuradio/gnuradio-3.8.4.0/docs/doxygen/doxyxml/ |
H A D | base.py | 68 def from_refid(cls, refid, top=None): argument 71 if top is not None and refid in top._refs: 72 return top._refs[refid] 75 inst.refid = refid 81 refid = getattr(parse_data, 'refid', None) 82 if refid is not None and top is not None and refid in top._refs: 83 return top._refs[refid] 85 if refid is not None: 86 inst.refid = refid 92 self.top._refs[obj.refid] = obj [all …]
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