Searched refs:refined_alignment (Results 1 – 2 of 2) sorted by relevance
687 register Alignment *refined_alignment = NULL;697 refined_alignment = Optimal_find_path(700 g_assert(refined_alignment);720 refined_alignment = Optimal_find_path(723 g_assert(refined_alignment);732 g_assert(refined_alignment);733 g_assert(refined_alignment->score >= alignment->score);734 return refined_alignment;793 refined_alignment = HPair_refine_alignment(hpair, alignment); in HPair_next_path()795 alignment = refined_alignment; in HPair_next_path()
643 register Alignment *refined_alignment = NULL; in GAM_Result_refine_alignment() local653 refined_alignment = Optimal_find_path( in GAM_Result_refine_alignment()656 g_assert(refined_alignment); in GAM_Result_refine_alignment()676 refined_alignment = Optimal_find_path( in GAM_Result_refine_alignment()679 g_assert(refined_alignment); in GAM_Result_refine_alignment()687 g_assert(refined_alignment); in GAM_Result_refine_alignment()688 g_assert(refined_alignment->score >= alignment->score); in GAM_Result_refine_alignment()690 g_message("Refined alignment score [%d]", refined_alignment->score); in GAM_Result_refine_alignment()691 return refined_alignment; in GAM_Result_refine_alignment()697 register Alignment *refined_alignment; in GAM_Result_add_alignment() local[all …]