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/dports/biology/bowtie2/bowtie2-2.4.4/
H A Ddp_framer.cpp109 if(refr >= reflen + maxns) { in frameSeedExtensionRect()
117 rect.refr_pretrim = refr; in frameSeedExtensionRect()
119 rect.refr = refr - trimr; in frameSeedExtensionRect()
234 rect.refr_pretrim = refr; in frameFindMateAnchorLeftRect()
236 rect.refr = refr - trimr; in frameFindMateAnchorLeftRect()
347 rect.refr_pretrim = refr; in frameFindMateAnchorRightRect()
349 rect.refr = refr - trimr; in frameFindMateAnchorRightRect()
386 int64_t refl, refr; in testCaseFindMateAnchorLeft() local
415 assert_eq(ex_refr, refr); in testCaseFindMateAnchorLeft()
447 int64_t refl, refr; in testCaseFindMateAnchorRight() local
[all …]
H A Ddp_framer.h62 refl = refr = triml = trimr = corel = corer = 0;
66 int64_t refr; // rightmost ref offset involved post trimming (incl) member
91 os << refl << ',' << refr << ',' << refl_pretrim << ',' in write()
101 bool tr = refr < refl; in entirelyTrimmed()
249 int64_t& refr, // in/out: ref pos of lower RHS of parallelogram in trimToRef() argument
257 if(refr >= (int64_t)reflen) { in trimToRef()
258 trimdn = (size_t)(refr - reflen + 1); in trimToRef()
/dports/biology/hisat2/hisat2-2.2.1/
H A Ddp_framer.cpp110 if(refr >= reflen + maxns) { in frameSeedExtensionRect()
118 rect.refr_pretrim = refr; in frameSeedExtensionRect()
120 rect.refr = refr - trimr; in frameSeedExtensionRect()
235 rect.refr_pretrim = refr; in frameFindMateAnchorLeftRect()
237 rect.refr = refr - trimr; in frameFindMateAnchorLeftRect()
348 rect.refr_pretrim = refr; in frameFindMateAnchorRightRect()
350 rect.refr = refr - trimr; in frameFindMateAnchorRightRect()
387 int64_t refl, refr; in testCaseFindMateAnchorLeft() local
416 assert_eq(ex_refr, refr); in testCaseFindMateAnchorLeft()
448 int64_t refl, refr; in testCaseFindMateAnchorRight() local
[all …]
H A Ddp_framer.h62 refl = refr = triml = trimr = corel = corer = 0;
66 int64_t refr; // rightmost ref offset involved post trimming (incl) member
95 bool tr = refr < refl; in entirelyTrimmed()
244 int64_t& refr, // in/out: ref pos of lower RHS of parallelogram in trimToRef() argument
252 if(refr >= (int64_t)reflen) { in trimToRef()
253 trimdn = (size_t)(refr - reflen + 1); in trimToRef()
/dports/lang/rust/rustc-1.58.1-src/src/test/ui/issues/
H A Dissue-40288.rs1 fn save_ref<'a>(refr: &'a i32, to: &mut [&'a i32]) { in save_ref()
3 *val = refr; in save_ref()
9 let ref mut refr = 1i32; in main()
13 save_ref(&*refr, &mut out); in main()
16 *refr = 3; //~ ERROR cannot assign to `*refr` because it is borrowed in main()
H A Dissue-40288.stderr1 error[E0506]: cannot assign to `*refr` because it is borrowed
4 LL | save_ref(&*refr, &mut out);
5 | ------ borrow of `*refr` occurs here
7 LL | *refr = 3;
8 | ^^^^^^^^^ assignment to borrowed `*refr` occurs here
/dports/net-mgmt/pandorafms_console/pandorafms_console-6.0SP2/operation/visual_console/
H A Dpublic_console.php59 $refr = (int) get_parameter ('refr', 0); variable
99 $table->data[0][1] = html_print_select ($values, 'refr', $refr, '', 'N/A', 0, true, false, false);
108 if ($refr > 0) {
149 if ($refr > 0) {
152 t.setTime (t.getTime() + <?php echo $refr * 1000; ?>);
162 href = href + "&refr=<?php echo $refr;?>";
H A Drender_view.php44 $refr = (int) get_parameter ('refr', $config['vc_refr']); variable
94 '<a href="index.php?sec=reporting&sec2=godmode/reporting/map_builder&refr=' . $refr . '">' .
177 $table->data[0][1] = html_print_select ($values, 'refr', $refr, '',
186 if ($refr > 0) {
211 if ($refr > 0) {
214 t.setTime (t.getTime() + <?php echo $refr * 1000; ?>);
225 href = href + "&refr=<?php echo $refr;?>";
/dports/devel/texlab/citeproc-rs-5252fbd8d2046a5a7d5cdcee6c6cb39bd0f1a7f3/crates/proc/src/
H A Dcitation_label.rs19 pub fn make_label(&self, refr: &Reference) -> String { in make_label()
21 let authors = refr.name.get(&NameVariable::Author); in make_label()
22 let issued = refr.date.get(&DateVariable::Issued); in make_label()
88 let mut refr = Reference::empty("ref_id".into(), CslType::Book); in test_write_label() localVariable
89 refr.name.insert( in test_write_label()
96 refr.date.insert( in test_write_label()
100 assert_eq!(trigraph.make_label(&refr), "Jobs95".to_owned()); in test_write_label()
101 refr.name.insert( in test_write_label()
114 assert_eq!(trigraph.make_label(&refr), "BoJo95".to_owned()); in test_write_label()
H A Dcite_context.rs145 let refr = self.reference(); in cite_lang() localVariable
146 refr.language.as_ref() in cite_lang()
151 let refr = self.reference(); in get_ordinary() localVariable
152 let get = |v: Variable| refr.ordinary.get(&v).map(|s| s.as_str()).map(Cow::Borrowed); in get_ordinary()
163 (Variable::CitationLabel, _) if refr.ordinary.get(&var).is_none() => { in get_ordinary()
183 fn ref_has_variable(refr: &Reference, var: AnyVariable) -> bool { in ref_has_variable()
185 AnyVariable::Ordinary(v) => refr.ordinary.contains_key(&v), in ref_has_variable()
186 AnyVariable::Number(v) => refr.number.contains_key(&v), in ref_has_variable()
187 AnyVariable::Name(v) => refr.name.contains_key(&v), in ref_has_variable()
188 AnyVariable::Date(v) => refr.date.contains_key(&v), in ref_has_variable()
/dports/net-mgmt/pandorafms_console/pandorafms_console-6.0SP2/operation/agentes/
H A Destado_agente.php118 $refr = get_parameter('refr', 0); variable
447 …'<a href="index.php?sec=estado&amp;sec2=operation/agentes/estado_agente&amp;refr=' . $refr . '&amp…
448 …'<a href="index.php?sec=estado&amp;sec2=operation/agentes/estado_agente&amp;refr=' . $refr . '&amp…
452 …'<a href="index.php?sec=estado&amp;sec2=operation/agentes/estado_agente&amp;refr=' . $refr . '&amp…
453 …'<a href="index.php?sec=estado&amp;sec2=operation/agentes/estado_agente&amp;refr=' . $refr . '&amp…
458 …'<a href="index.php?sec=estado&amp;sec2=operation/agentes/estado_agente&amp;refr=' . $refr . '&amp…
459 …'<a href="index.php?sec=estado&amp;sec2=operation/agentes/estado_agente&amp;refr=' . $refr . '&amp…
463 …'<a href="index.php?sec=estado&amp;sec2=operation/agentes/estado_agente&amp;refr=' . $refr . '&amp…
464 …'<a href="index.php?sec=estado&amp;sec2=operation/agentes/estado_agente&amp;refr=' . $refr . '&amp…
468 …'<a href="index.php?sec=estado&amp;sec2=operation/agentes/estado_agente&amp;refr=' . $refr . '&amp…
[all …]
H A Dstatus_monitor.php78 $refr = get_parameter('refr', 0); variable
94 …ex.php?sec=estado&amp;sec2=operation/agentes/status_monitor&amp;refr=' . $refr . '&amp;ag_group=' …
921 …'<a href="index.php?sec=estado&amp;sec2=operation/agentes/status_monitor&amp;refr=' . $refr . '&am…
926 …ex.php?sec=estado&amp;sec2=operation/agentes/status_monitor&amp;refr=' . $refr . '&amp;modulegroup…
927 …'<a href="index.php?sec=estado&amp;sec2=operation/agentes/status_monitor&amp;refr=' . $refr . '&am…
934 …'<a href="index.php?sec=estado&amp;sec2=operation/agentes/status_monitor&amp;refr=' . $refr . '&am…
944 …'<a href="index.php?sec=estado&amp;sec2=operation/agentes/status_monitor&amp;refr=' . $refr . '&am…
953 …'<a href="index.php?sec=estado&amp;sec2=operation/agentes/status_monitor&amp;refr=' . $refr . '&am…
968 …'<a href="index.php?sec=estado&amp;sec2=operation/agentes/status_monitor&amp;refr=' . $refr . '&am…
973 …ex.php?sec=estado&amp;sec2=operation/agentes/status_monitor&amp;refr=' . $refr . '&amp;offset=' . …
[all …]
/dports/devel/texlab/citeproc-rs-5252fbd8d2046a5a7d5cdcee6c6cb39bd0f1a7f3/crates/citeproc/benches/
H A Dsome.rs44 let mut refr = Reference::empty(format!("id_{}", n).into(), CslType::LegalCase); in common_reference() localVariable
45 refr.ordinary in common_reference()
47 refr.ordinary in common_reference()
49 refr.number in common_reference()
51 refr.date.insert( in common_reference()
55 refr in common_reference()
/dports/graphics/py-scikit-image/scikit-image-0.19.0/skimage/segmentation/tests/
H A Dtest_active_contour_model.py25 refr = [98, 99, 100, 101, 102, 103, 104, 105, 106, 108]
27 assert_equal(np.array(snake[:10, 0], dtype=np.int32), refr)
41 refr = [136, 135, 134, 133, 132, 131, 129, 128, 127, 125]
43 assert_equal(np.array(snake[:10, 0], dtype=np.int32), refr)
57 refr = [76, 76, 75, 74, 73, 72, 71, 70, 69, 69]
59 assert_equal(np.array(snake[:10, 0], dtype=np.int32), refr)
79 refr = [136, 135, 134, 133, 132, 131, 129, 128, 127, 125]
81 assert_equal(np.array(snake[:10, 0], dtype=np.int32), refr)
86 assert_equal(np.array(snake[:10, 0], dtype=np.int32), refr)
92 assert_equal(np.array(snake[:10, 0], dtype=np.int32), refr)
/dports/graphics/vips/vips-8.12.0/libvips/mosaicing/
H A Dchkpair.c102 VipsRect refr, secr; in vips__correl() local
109 refr.left = 0; in vips__correl()
110 refr.top = 0; in vips__correl()
111 refr.width = ref->Xsize; in vips__correl()
112 refr.height = ref->Ysize; in vips__correl()
117 vips_rect_intersectrect( &refr, &winr, &wincr ); in vips__correl()
/dports/sysutils/cpu-x/CPU-X-4.0.1/src/
H A Dgui_gtk.h110 static gboolean grefresh(GThrd *refr);
128 static void reload_with_daemon(GtkWidget *button, GThrd *refr);
137 static void start_benchmark_bg(GtkSwitch *gswitch, GdkEvent *event, GThrd *refr);
164 static void set_signals(GtkLabels *glab, Labels *data, GThrd *refr);
167 void fill_frame(GtkWidget *widget, cairo_t *cr, GThrd *refr);
/dports/devel/texlab/citeproc-rs-5252fbd8d2046a5a7d5cdcee6c6cb39bd0f1a7f3/pandoc-lua-preproc/
H A Dpreproc.lua52 function parse_ordinary(refr, field)
53 local content = refr[field]
65 refr[field] = jsonified
138 for i,refr in ipairs(library) do
140 parse_ordinary(refr, field)
/dports/devel/texlab/citeproc-rs-5252fbd8d2046a5a7d5cdcee6c6cb39bd0f1a7f3/crates/proc/src/disamb/
H A Dtest.rs99 let mut refr = Reference::empty("ref_id".into(), CslType::Book); in test() localVariable
100 refr.ordinary.insert(Variable::Title, "The Title".into()); in test()
108 let vec = create_ref_ir::<Markup>(db, &refr); in test()
112 let dfa = create_dfa::<Markup>(db, &refr); in test()
119 db.insert_references(vec![refr, refr2]); in test()
/dports/math/libpgmath/flang-d07daf3/test/ncar_kernels/PORT_binterp/src/
H A Dkernel_binterp.F9063 REAL(KIND = r8) :: refr(pcols) local
98 READ(UNIT = kgen_unit) refr
167 …CALL binterp(extpsw, ncol, ncoef, prefr, prefi, refr, refi, refrtabsw, refitabsw, itab, jtab, ttab…
194 IF ( ALL( outstate_refr == refr ) ) THEN
204 WRITE(*,*) count( outstate_refr /= refr), " of ", size( refr ), " elements are different."
205 … WRITE(*,*) "RMS of difference is ", sqrt(sum((outstate_refr - refr)**2)/real(size(outstate_refr)))
206 WRITE(*,*) "Minimum difference is ", minval(abs(outstate_refr - refr))
207 WRITE(*,*) "Maximum difference is ", maxval(abs(outstate_refr - refr))
208 WRITE(*,*) "Mean value of kernel-generated outstate_refr is ", sum(refr)/real(size(refr))
/dports/math/libpgmath/flang-d07daf3/test/ncar_kernels/PORT_binterp/src_orig/
H A Dkernel_binterp.F9063 REAL(KIND = r8) :: refr(pcols) local
95 READ(UNIT = kgen_unit) refr
164 …CALL binterp(extpsw, ncol, ncoef, prefr, prefi, refr, refi, refrtabsw, refitabsw, itab, jtab, ttab…
190 IF ( ALL( outstate_refr == refr ) ) THEN
199 WRITE(*,*) count( outstate_refr /= refr), " of ", size( refr ), " elements are different."
200 … WRITE(*,*) "RMS of difference is ", sqrt(sum((outstate_refr - refr)**2)/real(size(outstate_refr)))
201 WRITE(*,*) "Minimum difference is ", minval(abs(outstate_refr - refr))
202 WRITE(*,*) "Maximum difference is ", maxval(abs(outstate_refr - refr))
203 WRITE(*,*) "Mean value of kernel-generated outstate_refr is ", sum(refr)/real(size(refr))
/dports/science/mcxtrace-comps/mcxtrace-comps-1.2-src/optics/
H A DLens_parab_Cyl.comp205 data_lens_parab_Cyl incid,refr,outg;
257 refr=intersect_parab_Cyl(incid,parab_Cyl);
259 if(refr.k[0]==0 && refr.k[1]==0 && refr.k[2]==0) continue;
261 …dl=sqrt( (refr.coord[0]-x)*(refr.coord[0]-x) + (refr.coord[1]-y)*(refr.coord[1]-y) + (refr.coord[2…
265 kx=refr.k[0];
266 ky=refr.k[1];
267 kz=refr.k[2];
274 outg=intersect_parab_Cyl(refr,parab_Cyl);
H A DLens_parab_Cyl_rough.comp223 data incid,refr,outg;
282 refr=intersect_Parab_Cyl_rough(incid,parab_Cyl);
284 if(refr.k[0]==0 && refr.k[1]==0 && refr.k[2]==0) continue;
286 …dl=sqrt( (refr.coord[0]-x)*(refr.coord[0]-x) + (refr.coord[1]-y)*(refr.coord[1]-y) + (refr.coord[2…
290 kx=refr.k[0];
291 ky=refr.k[1];
292 kz=refr.k[2];
299 outg=intersect_Parab_Cyl_rough(refr,parab_Cyl);
H A DLens_parab.comp244 incom_parab incid,refr,outg;
297 refr=intersection_lens_parab(incid,parab);
299 if(refr.k[0]==0 && refr.k[1]==0 && refr.k[2]==0) continue;
301 …dl=sqrt( (refr.coord[0]-x)*(refr.coord[0]-x) + (refr.coord[1]-y)*(refr.coord[1]-y) + (refr.coord[2…
305 kx=refr.k[0];
306 ky=refr.k[1];
307 kz=refr.k[2];
314 outg=intersection_lens_parab(refr,parab);
H A DLens_parab_rough.comp267 incom incid,refr,outg;
323 refr=intersection_lens_parab_rough(incid,parab);
325 if(refr.k[0]==0 && refr.k[1]==0 && refr.k[2]==0) continue;
327 …dl=sqrt( (refr.coord[0]-x)*(refr.coord[0]-x) + (refr.coord[1]-y)*(refr.coord[1]-y) + (refr.coord[2…
331 kx=refr.k[0];
332 ky=refr.k[1];
333 kz=refr.k[2];
340 outg=intersection_lens_parab_rough(refr,parab);
/dports/net-mgmt/pandorafms_console/pandorafms_console-6.0SP2/operation/snmpconsole/
H A Dsnmp_statistics.php36 $refr = (int)get_parameter("refr", 0); variable
44 …ref="index.php?sec=estado&sec2=operation/snmpconsole/snmp_statistics&pure=0&refr=' . $refr . '">' .
48 …ref="index.php?sec=estado&sec2=operation/snmpconsole/snmp_statistics&pure=1&refr=' . $refr . '">' .
54 …c=estado&sec2=operation/snmpconsole/snmp_view&pure=' . $config["pure"] . '&refr=' . $refr . '">' .
60 …do&sec2=operation/snmpconsole/snmp_statistics&pure=' . $config["pure"] . '&refr=' . $refr . '">' .

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