Searched refs:result_junctions (Results 1 – 3 of 3) sorted by relevance
331 result_junctions = []372 result_junctions.append([junction_str, is_gtf_junction])375 if len(result_junctions) > 0:377 for junction_str, is_gtf_junction in result_junctions:382 return result_junctions, len(result_junctions) > 0, is_gtf_junction_read
399 result_junctions[ret].last_exon_base_left = last_exon_last_base; in fetch_boundaries()400 result_junctions[ret].first_exon_base_right = next_exon_first_base; in fetch_boundaries()401 strcpy(result_junctions[ret].chromosome_name_left, chroname); in fetch_boundaries()402 strcpy(result_junctions[ret].chromosome_name_right, chroname); in fetch_boundaries()454 result_junctions[ret].last_exon_base_left = last_exon_last_base; in calc_junctions_from_cigar()455 result_junctions[ret].first_exon_base_right = next_exon_first_base; in calc_junctions_from_cigar()456 strcpy(result_junctions[ret].chromosome_name_left, chroname); in calc_junctions_from_cigar()457 strcpy(result_junctions[ret].chromosome_name_right, chroname); in calc_junctions_from_cigar()584 result_junctions[ret].last_exon_base_left = boundaries_inclusive_base_pos[x1]; in calc_junctions_from_cigar()585 result_junctions[ret].first_exon_base_right = boundaries_inclusive_base_pos[x2]; in calc_junctions_from_cigar()[all …]
1237 result_junctions = []1241 result_junctions.append([junction_str, junction_str in junctions_dic])1243 return result_junctions