/dports/biology/wise/wise2.4.1/src/models/ |
H A D | threestatedp.h | 392 …enj,int i,int j,int state,boolean isspecial,int * reti,int * retj,int * retstate,boolean * retspec… 396 …mat,int i,int j,int state,boolean isspecial,int * reti,int * retj,int * retstate,boolean * retspec… 398 …tein * mat,int i,int j,int state,int cscore,int * reti,int * retj,int * retstate,boolean * retspec… 432 …mat,int i,int j,int state,boolean isspecial,int * reti,int * retj,int * retstate,boolean * retspec… 434 …mat,int i,int j,int state,boolean isspecial,int * reti,int * retj,int * retstate,boolean * retspec…
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H A D | threestateloop.h | 392 …enj,int i,int j,int state,boolean isspecial,int * reti,int * retj,int * retstate,boolean * retspec… 396 …mat,int i,int j,int state,boolean isspecial,int * reti,int * retj,int * retstate,boolean * retspec… 398 …Loop * mat,int i,int j,int state,int cscore,int * reti,int * retj,int * retstate,boolean * retspec… 432 …mat,int i,int j,int state,boolean isspecial,int * reti,int * retj,int * retstate,boolean * retspec… 434 …mat,int i,int j,int state,boolean isspecial,int * reti,int * retj,int * retstate,boolean * retspec…
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H A D | motifmatrixdp.h | 388 …enj,int i,int j,int state,boolean isspecial,int * reti,int * retj,int * retstate,boolean * retspec… 392 …mat,int i,int j,int state,boolean isspecial,int * reti,int * retj,int * retstate,boolean * retspec… 394 …trix * mat,int i,int j,int state,int cscore,int * reti,int * retj,int * retstate,boolean * retspec… 428 …mat,int i,int j,int state,boolean isspecial,int * reti,int * retj,int * retstate,boolean * retspec… 430 …mat,int i,int j,int state,boolean isspecial,int * reti,int * retj,int * retstate,boolean * retspec…
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H A D | fivestate.h | 392 …enj,int i,int j,int state,boolean isspecial,int * reti,int * retj,int * retstate,boolean * retspec… 396 …mat,int i,int j,int state,boolean isspecial,int * reti,int * retj,int * retstate,boolean * retspec… 398 …tein * mat,int i,int j,int state,int cscore,int * reti,int * retj,int * retstate,boolean * retspec… 432 …mat,int i,int j,int state,boolean isspecial,int * reti,int * retj,int * retstate,boolean * retspec… 434 …mat,int i,int j,int state,boolean isspecial,int * reti,int * retj,int * retstate,boolean * retspec…
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H A D | localdba.h | 381 …enj,int i,int j,int state,boolean isspecial,int * reti,int * retj,int * retstate,boolean * retspec… 385 …mat,int i,int j,int state,boolean isspecial,int * reti,int * retj,int * retstate,boolean * retspec… 387 …lock * mat,int i,int j,int state,int cscore,int * reti,int * retj,int * retstate,boolean * retspec… 421 …mat,int i,int j,int state,boolean isspecial,int * reti,int * retj,int * retstate,boolean * retspec… 423 …mat,int i,int j,int state,boolean isspecial,int * reti,int * retj,int * retstate,boolean * retspec…
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H A D | slimdba.h | 410 …enj,int i,int j,int state,boolean isspecial,int * reti,int * retj,int * retstate,boolean * retspec… 414 …mat,int i,int j,int state,boolean isspecial,int * reti,int * retj,int * retstate,boolean * retspec… 416 …lock * mat,int i,int j,int state,int cscore,int * reti,int * retj,int * retstate,boolean * retspec… 450 …mat,int i,int j,int state,boolean isspecial,int * reti,int * retj,int * retstate,boolean * retspec… 452 …mat,int i,int j,int state,boolean isspecial,int * reti,int * retj,int * retstate,boolean * retspec…
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H A D | estloop3.h | 406 …enj,int i,int j,int state,boolean isspecial,int * reti,int * retj,int * retstate,boolean * retspec… 410 …mat,int i,int j,int state,boolean isspecial,int * reti,int * retj,int * retstate,boolean * retspec… 412 …oop3 * mat,int i,int j,int state,int cscore,int * reti,int * retj,int * retstate,boolean * retspec… 446 …mat,int i,int j,int state,boolean isspecial,int * reti,int * retj,int * retstate,boolean * retspec… 448 …mat,int i,int j,int state,boolean isspecial,int * reti,int * retj,int * retstate,boolean * retspec…
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H A D | estslimloop.h | 405 …enj,int i,int j,int state,boolean isspecial,int * reti,int * retj,int * retstate,boolean * retspec… 409 …mat,int i,int j,int state,boolean isspecial,int * reti,int * retj,int * retstate,boolean * retspec… 411 …oop3 * mat,int i,int j,int state,int cscore,int * reti,int * retj,int * retstate,boolean * retspec… 445 …mat,int i,int j,int state,boolean isspecial,int * reti,int * retj,int * retstate,boolean * retspec… 447 …mat,int i,int j,int state,boolean isspecial,int * reti,int * retj,int * retstate,boolean * retspec…
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H A D | geneloop21.h | 418 …enj,int i,int j,int state,boolean isspecial,int * reti,int * retj,int * retstate,boolean * retspec… 422 …mat,int i,int j,int state,boolean isspecial,int * reti,int * retj,int * retstate,boolean * retspec… 424 …op21 * mat,int i,int j,int state,int cscore,int * reti,int * retj,int * retstate,boolean * retspec… 458 …mat,int i,int j,int state,boolean isspecial,int * reti,int * retj,int * retstate,boolean * retspec… 460 …mat,int i,int j,int state,boolean isspecial,int * reti,int * retj,int * retstate,boolean * retspec…
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H A D | genewise21.h | 418 …enj,int i,int j,int state,boolean isspecial,int * reti,int * retj,int * retstate,boolean * retspec… 422 …mat,int i,int j,int state,boolean isspecial,int * reti,int * retj,int * retstate,boolean * retspec… 424 …se21 * mat,int i,int j,int state,int cscore,int * reti,int * retj,int * retstate,boolean * retspec… 458 …mat,int i,int j,int state,boolean isspecial,int * reti,int * retj,int * retstate,boolean * retspec… 460 …mat,int i,int j,int state,boolean isspecial,int * reti,int * retj,int * retstate,boolean * retspec…
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H A D | genomewise9.h | 427 …enj,int i,int j,int state,boolean isspecial,int * reti,int * retj,int * retstate,boolean * retspec… 431 …mat,int i,int j,int state,boolean isspecial,int * reti,int * retj,int * retstate,boolean * retspec… 433 …ise9 * mat,int i,int j,int state,int cscore,int * reti,int * retj,int * retstate,boolean * retspec… 467 …mat,int i,int j,int state,boolean isspecial,int * reti,int * retj,int * retstate,boolean * retspec… 469 …mat,int i,int j,int state,boolean isspecial,int * reti,int * retj,int * retstate,boolean * retspec…
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H A D | gwlite.h | 402 …enj,int i,int j,int state,boolean isspecial,int * reti,int * retj,int * retstate,boolean * retspec… 406 …mat,int i,int j,int state,boolean isspecial,int * reti,int * retj,int * retstate,boolean * retspec… 408 …odel * mat,int i,int j,int state,int cscore,int * reti,int * retj,int * retstate,boolean * retspec… 442 …mat,int i,int j,int state,boolean isspecial,int * reti,int * retj,int * retstate,boolean * retspec… 444 …mat,int i,int j,int state,boolean isspecial,int * reti,int * retj,int * retstate,boolean * retspec…
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H A D | genestretch6.h | 411 …enj,int i,int j,int state,boolean isspecial,int * reti,int * retj,int * retstate,boolean * retspec… 415 …mat,int i,int j,int state,boolean isspecial,int * reti,int * retj,int * retstate,boolean * retspec… 417 …tch6 * mat,int i,int j,int state,int cscore,int * reti,int * retj,int * retstate,boolean * retspec… 451 …mat,int i,int j,int state,boolean isspecial,int * reti,int * retj,int * retstate,boolean * retspec… 453 …mat,int i,int j,int state,boolean isspecial,int * reti,int * retj,int * retstate,boolean * retspec…
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H A D | proteinsw.h | 414 …enj,int i,int j,int state,boolean isspecial,int * reti,int * retj,int * retstate,boolean * retspec… 418 …mat,int i,int j,int state,boolean isspecial,int * reti,int * retj,int * retstate,boolean * retspec… 420 …inSW * mat,int i,int j,int state,int cscore,int * reti,int * retj,int * retstate,boolean * retspec… 454 …mat,int i,int j,int state,boolean isspecial,int * reti,int * retj,int * retstate,boolean * retspec… 456 …mat,int i,int j,int state,boolean isspecial,int * reti,int * retj,int * retstate,boolean * retspec…
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H A D | geneloop6.h | 404 …enj,int i,int j,int state,boolean isspecial,int * reti,int * retj,int * retstate,boolean * retspec… 408 …mat,int i,int j,int state,boolean isspecial,int * reti,int * retj,int * retstate,boolean * retspec… 410 …oop6 * mat,int i,int j,int state,int cscore,int * reti,int * retj,int * retstate,boolean * retspec… 444 …mat,int i,int j,int state,boolean isspecial,int * reti,int * retj,int * retstate,boolean * retspec… 446 …mat,int i,int j,int state,boolean isspecial,int * reti,int * retj,int * retstate,boolean * retspec…
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H A D | genephase6.h | 411 …enj,int i,int j,int state,boolean isspecial,int * reti,int * retj,int * retstate,boolean * retspec… 415 …mat,int i,int j,int state,boolean isspecial,int * reti,int * retj,int * retstate,boolean * retspec… 417 …ase6 * mat,int i,int j,int state,int cscore,int * reti,int * retj,int * retstate,boolean * retspec… 451 …mat,int i,int j,int state,boolean isspecial,int * reti,int * retj,int * retstate,boolean * retspec… 453 …mat,int i,int j,int state,boolean isspecial,int * reti,int * retj,int * retstate,boolean * retspec…
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H A D | genewise4.h | 403 …enj,int i,int j,int state,boolean isspecial,int * reti,int * retj,int * retstate,boolean * retspec… 407 …mat,int i,int j,int state,boolean isspecial,int * reti,int * retj,int * retstate,boolean * retspec… 409 …ise4 * mat,int i,int j,int state,int cscore,int * reti,int * retj,int * retstate,boolean * retspec… 443 …mat,int i,int j,int state,boolean isspecial,int * reti,int * retj,int * retstate,boolean * retspec… 445 …mat,int i,int j,int state,boolean isspecial,int * reti,int * retj,int * retstate,boolean * retspec…
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H A D | genewise6.h | 403 …enj,int i,int j,int state,boolean isspecial,int * reti,int * retj,int * retstate,boolean * retspec… 407 …mat,int i,int j,int state,boolean isspecial,int * reti,int * retj,int * retstate,boolean * retspec… 409 …ise6 * mat,int i,int j,int state,int cscore,int * reti,int * retj,int * retstate,boolean * retspec… 443 …mat,int i,int j,int state,boolean isspecial,int * reti,int * retj,int * retstate,boolean * retspec… 445 …mat,int i,int j,int state,boolean isspecial,int * reti,int * retj,int * retstate,boolean * retspec…
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H A D | pseudowise7.h | 410 …enj,int i,int j,int state,boolean isspecial,int * reti,int * retj,int * retstate,boolean * retspec… 414 …mat,int i,int j,int state,boolean isspecial,int * reti,int * retj,int * retstate,boolean * retspec… 416 …ise7 * mat,int i,int j,int state,int cscore,int * reti,int * retj,int * retstate,boolean * retspec… 450 …mat,int i,int j,int state,boolean isspecial,int * reti,int * retj,int * retstate,boolean * retspec… 452 …mat,int i,int j,int state,boolean isspecial,int * reti,int * retj,int * retstate,boolean * retspec…
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H A D | editdistdp.h | 475 …enj,int i,int j,int state,boolean isspecial,int * reti,int * retj,int * retstate,boolean * retspec… 479 …mat,int i,int j,int state,boolean isspecial,int * reti,int * retj,int * retstate,boolean * retspec… 481 …ance * mat,int i,int j,int state,int cscore,int * reti,int * retj,int * retstate,boolean * retspec… 515 …mat,int i,int j,int state,boolean isspecial,int * reti,int * retj,int * retstate,boolean * retspec… 517 …mat,int i,int j,int state,boolean isspecial,int * reti,int * retj,int * retstate,boolean * retspec…
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H A D | estfrag3.h | 398 …enj,int i,int j,int state,boolean isspecial,int * reti,int * retj,int * retstate,boolean * retspec… 402 …mat,int i,int j,int state,boolean isspecial,int * reti,int * retj,int * retstate,boolean * retspec… 404 …rag3 * mat,int i,int j,int state,int cscore,int * reti,int * retj,int * retstate,boolean * retspec… 438 …mat,int i,int j,int state,boolean isspecial,int * reti,int * retj,int * retstate,boolean * retspec… 440 …mat,int i,int j,int state,boolean isspecial,int * reti,int * retj,int * retstate,boolean * retspec…
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H A D | estquick3.h | 405 …enj,int i,int j,int state,boolean isspecial,int * reti,int * retj,int * retstate,boolean * retspec… 409 …mat,int i,int j,int state,boolean isspecial,int * reti,int * retj,int * retstate,boolean * retspec… 411 …ick3 * mat,int i,int j,int state,int cscore,int * reti,int * retj,int * retstate,boolean * retspec… 445 …mat,int i,int j,int state,boolean isspecial,int * reti,int * retj,int * retstate,boolean * retspec… 447 …mat,int i,int j,int state,boolean isspecial,int * reti,int * retj,int * retstate,boolean * retspec…
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H A D | estslim3.h | 405 …enj,int i,int j,int state,boolean isspecial,int * reti,int * retj,int * retstate,boolean * retspec… 409 …mat,int i,int j,int state,boolean isspecial,int * reti,int * retj,int * retstate,boolean * retspec… 411 …lim3 * mat,int i,int j,int state,int cscore,int * reti,int * retj,int * retstate,boolean * retspec… 445 …mat,int i,int j,int state,boolean isspecial,int * reti,int * retj,int * retstate,boolean * retspec… 447 …mat,int i,int j,int state,boolean isspecial,int * reti,int * retj,int * retstate,boolean * retspec…
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H A D | estwise3.h | 405 …enj,int i,int j,int state,boolean isspecial,int * reti,int * retj,int * retstate,boolean * retspec… 409 …mat,int i,int j,int state,boolean isspecial,int * reti,int * retj,int * retstate,boolean * retspec… 411 …ise3 * mat,int i,int j,int state,int cscore,int * reti,int * retj,int * retstate,boolean * retspec… 445 …mat,int i,int j,int state,boolean isspecial,int * reti,int * retj,int * retstate,boolean * retspec… 447 …mat,int i,int j,int state,boolean isspecial,int * reti,int * retj,int * retstate,boolean * retspec…
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H A D | alignwisedp.h | 463 …enj,int i,int j,int state,boolean isspecial,int * reti,int * retj,int * retstate,boolean * retspec… 467 …mat,int i,int j,int state,boolean isspecial,int * reti,int * retj,int * retstate,boolean * retspec… 469 …Wise * mat,int i,int j,int state,int cscore,int * reti,int * retj,int * retstate,boolean * retspec… 503 …mat,int i,int j,int state,boolean isspecial,int * reti,int * retj,int * retstate,boolean * retspec… 505 …mat,int i,int j,int state,boolean isspecial,int * reti,int * retj,int * retstate,boolean * retspec…
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