/dports/biology/sra-tools/sra-tools-2.11.0/ncbi-vdb/libs/ngs/ |
H A D | SRA_ReadGroup.c | 64 const NGS_String * run_name; member 105 const NGS_String* run_name, in SRA_ReadGroupInit() argument 117 TRY ( self -> run_name = NGS_StringDuplicate ( run_name, ctx ) ) in SRA_ReadGroupInit() 133 NGS_StringRelease ( self -> run_name, ctx ); in SRA_ReadGroupWhack() 208 NGS_StringSize ( self -> run_name, ctx ), in SRA_ReadGroupGetRead() 215 NGS_StringSize ( self -> run_name, ctx ), in SRA_ReadGroupGetRead() 305 assert ( run_name != NULL ); in SRA_ReadGroupMake() 309 …"allocating NGS_ReadGroup on '%.*s'", NGS_StringSize ( run_name, ctx ), NGS_StringData ( run_name,… in SRA_ReadGroupMake() 314 …tname, sizeof instname, NULL, "%.*s", NGS_StringSize ( run_name, ctx ), NGS_StringData ( run_name,… in SRA_ReadGroupMake() 355 assert ( run_name != NULL ); in SRA_ReadGroupIteratorMake() [all …]
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H A D | SRA_DB_ReadCollection.c | 71 const NGS_String * run_name; member 85 NGS_StringRelease ( self -> run_name, ctx ); in SRA_DB_ReadCollectionWhack() 92 return NGS_StringDuplicate ( self -> run_name, ctx ); in SRA_DB_ReadCollectionGetName() 207 … NGS_AlignmentMakeNull ( ctx, NGS_StringData(self -> run_name, ctx), NGS_StringSize(self -> run_na… in SRA_DB_ReadCollectionGetAlignments() 234 … NGS_AlignmentMakeNull ( ctx, NGS_StringData(self -> run_name, ctx), NGS_StringSize(self -> run_na… in SRA_DB_ReadCollectionGetAlignmentRange() 244 return NGS_ReadMakeNull ( ctx, self -> run_name ); in SRA_DB_ReadCollectionGetReads() 265 if ( string_cmp ( NGS_StringData ( self -> run_name, ctx ), in SRA_DB_ReadCollectionGetRead() 266 NGS_StringSize ( self -> run_name, ctx ), in SRA_DB_ReadCollectionGetRead() 273 NGS_StringSize ( self -> run_name, ctx ), in SRA_DB_ReadCollectionGetRead() 274 NGS_StringData ( self -> run_name, ctx ), in SRA_DB_ReadCollectionGetRead() [all …]
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H A D | CSRA1_ReadCollection.c | 82 const NGS_String * run_name; member 129 NGS_StringRelease ( self -> run_name, ctx ); in CSRA1_ReadCollectionWhack() 210 return NGS_StringDuplicate ( self -> run_name, ctx ); in CSRA1_ReadCollectionGetName() 377 if ( string_cmp ( NGS_StringData ( self -> run_name, ctx ), in CSRA1_ReadCollectionGetAlignment() 378 NGS_StringSize ( self -> run_name, ctx ), in CSRA1_ReadCollectionGetAlignment() 385 NGS_StringSize ( self -> run_name, ctx ), in CSRA1_ReadCollectionGetAlignment() 386 NGS_StringData ( self -> run_name, ctx ), in CSRA1_ReadCollectionGetAlignment() 392 …ake ( ctx, self, id . rowId, NGS_StringData( self -> run_name, ctx ), NGS_StringSize( self->run_na… in CSRA1_ReadCollectionGetAlignment() 474 NGS_StringSize ( self -> run_name, ctx ), in CSRA1_ReadCollectionGetRead() 481 NGS_StringSize ( self -> run_name, ctx ), in CSRA1_ReadCollectionGetRead() [all …]
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H A D | CSRA1_Read.c | 110 TRY ( self -> run_name = NGS_StringDuplicate ( run_name, ctx ) ) in CSRA1_ReadInit() 140 const NGS_String * run_name, in CSRA1_ReadIteratorInit() argument 154 TRY ( self -> run_name = NGS_StringDuplicate ( run_name, ctx ) ) in CSRA1_ReadIteratorInit() 168 const NGS_String * run_name, in CSRA1_ReadIteratorMake() argument 182 …cating CSRA1_ReadIterator on '%.*s'", NGS_StringSize ( run_name, ctx ), NGS_StringData ( run_name,… in CSRA1_ReadIteratorMake() 187 …tname, sizeof instname, NULL, "%.*s", NGS_StringSize ( run_name, ctx ), NGS_StringData ( run_name,… in CSRA1_ReadIteratorMake() 216 const NGS_String * run_name, in CSRA1_ReadIteratorMakeRange() argument 232 …cating CSRA1_ReadIterator on '%.*s'", NGS_StringSize ( run_name, ctx ), NGS_StringData ( run_name,… in CSRA1_ReadIteratorMakeRange() 237 …tname, sizeof instname, NULL, "%.*s", NGS_StringSize ( run_name, ctx ), NGS_StringData ( run_name,… in CSRA1_ReadIteratorMakeRange() 308 …ing SRA_Read(%lu) on '%.*s'", readId, NGS_StringSize ( run_name, ctx ), NGS_StringData ( run_name,… in CSRA1_ReadMake() [all …]
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H A D | SRA_ReadCollection.c | 67 const NGS_String * run_name; member 77 NGS_StringRelease ( self -> run_name, ctx ); in SRA_ReadCollectionWhack() 86 return NGS_StringDuplicate ( self -> run_name, ctx ); in SRA_ReadCollectionGetName() 195 … NGS_AlignmentMakeNull ( ctx, NGS_StringData(self -> run_name, ctx), NGS_StringSize(self -> run_na… in SRA_ReadCollectionGetAlignments() 224 … NGS_AlignmentMakeNull ( ctx, NGS_StringData(self -> run_name, ctx), NGS_StringSize(self -> run_na… in SRA_ReadCollectionGetAlignmentRange() 234 return NGS_ReadMakeNull ( ctx, self -> run_name ); in SRA_ReadCollectionGetReads() 255 if ( string_cmp ( NGS_StringData ( self -> run_name, ctx ), in SRA_ReadCollectionGetRead() 256 NGS_StringSize ( self -> run_name, ctx ), in SRA_ReadCollectionGetRead() 263 NGS_StringSize ( self -> run_name, ctx ), in SRA_ReadCollectionGetRead() 264 NGS_StringData ( self -> run_name, ctx ), in SRA_ReadCollectionGetRead() [all …]
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H A D | SRA_Read.c | 115 TRY ( self -> run_name = NGS_StringDuplicate ( run_name, ctx ) ) in SRA_ReadInit() 130 const NGS_String * run_name, in SRA_ReadIteratorInit() argument 143 TRY ( self -> run_name = NGS_StringDuplicate ( run_name, ctx ) ) in SRA_ReadIteratorInit() 160 NGS_StringRelease ( self -> run_name, ctx ); in SRA_ReadWhack() 229 …ing SRA_Read(%lu) on '%.*s'", readId, NGS_StringSize ( run_name, ctx ), NGS_StringData ( run_name,… in SRA_ReadMake() 234 …, sizeof instname, NULL, "%.*s(%lu)", NGS_StringSize ( run_name, ctx ), NGS_StringData ( run_name,… in SRA_ReadMake() 568 …locating NGS_ReadIterator on '%.*s'", NGS_StringSize ( run_name, ctx ), NGS_StringData ( run_name,… in SRA_ReadIteratorMake() 573 …tname, sizeof instname, NULL, "%.*s", NGS_StringSize ( run_name, ctx ), NGS_StringData ( run_name,… in SRA_ReadIteratorMake() 600 const NGS_String * run_name, in SRA_ReadIteratorMakeRange() argument 615 …locating NGS_ReadIterator on '%.*s'", NGS_StringSize ( run_name, ctx ), NGS_StringData ( run_name,… in SRA_ReadIteratorMakeRange() [all …]
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/dports/biology/ncbi-vdb/ncbi-vdb-2.11.0/libs/ngs/ |
H A D | SRA_ReadGroup.c | 64 const NGS_String * run_name; member 105 const NGS_String* run_name, in SRA_ReadGroupInit() argument 117 TRY ( self -> run_name = NGS_StringDuplicate ( run_name, ctx ) ) in SRA_ReadGroupInit() 133 NGS_StringRelease ( self -> run_name, ctx ); in SRA_ReadGroupWhack() 208 NGS_StringSize ( self -> run_name, ctx ), in SRA_ReadGroupGetRead() 215 NGS_StringSize ( self -> run_name, ctx ), in SRA_ReadGroupGetRead() 305 assert ( run_name != NULL ); in SRA_ReadGroupMake() 309 …"allocating NGS_ReadGroup on '%.*s'", NGS_StringSize ( run_name, ctx ), NGS_StringData ( run_name,… in SRA_ReadGroupMake() 314 …tname, sizeof instname, NULL, "%.*s", NGS_StringSize ( run_name, ctx ), NGS_StringData ( run_name,… in SRA_ReadGroupMake() 355 assert ( run_name != NULL ); in SRA_ReadGroupIteratorMake() [all …]
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H A D | SRA_DB_ReadCollection.c | 71 const NGS_String * run_name; member 85 NGS_StringRelease ( self -> run_name, ctx ); in SRA_DB_ReadCollectionWhack() 92 return NGS_StringDuplicate ( self -> run_name, ctx ); in SRA_DB_ReadCollectionGetName() 207 … NGS_AlignmentMakeNull ( ctx, NGS_StringData(self -> run_name, ctx), NGS_StringSize(self -> run_na… in SRA_DB_ReadCollectionGetAlignments() 234 … NGS_AlignmentMakeNull ( ctx, NGS_StringData(self -> run_name, ctx), NGS_StringSize(self -> run_na… in SRA_DB_ReadCollectionGetAlignmentRange() 244 return NGS_ReadMakeNull ( ctx, self -> run_name ); in SRA_DB_ReadCollectionGetReads() 265 if ( string_cmp ( NGS_StringData ( self -> run_name, ctx ), in SRA_DB_ReadCollectionGetRead() 266 NGS_StringSize ( self -> run_name, ctx ), in SRA_DB_ReadCollectionGetRead() 273 NGS_StringSize ( self -> run_name, ctx ), in SRA_DB_ReadCollectionGetRead() 274 NGS_StringData ( self -> run_name, ctx ), in SRA_DB_ReadCollectionGetRead() [all …]
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H A D | CSRA1_ReadCollection.c | 82 const NGS_String * run_name; member 129 NGS_StringRelease ( self -> run_name, ctx ); in CSRA1_ReadCollectionWhack() 210 return NGS_StringDuplicate ( self -> run_name, ctx ); in CSRA1_ReadCollectionGetName() 377 if ( string_cmp ( NGS_StringData ( self -> run_name, ctx ), in CSRA1_ReadCollectionGetAlignment() 378 NGS_StringSize ( self -> run_name, ctx ), in CSRA1_ReadCollectionGetAlignment() 385 NGS_StringSize ( self -> run_name, ctx ), in CSRA1_ReadCollectionGetAlignment() 386 NGS_StringData ( self -> run_name, ctx ), in CSRA1_ReadCollectionGetAlignment() 392 …ake ( ctx, self, id . rowId, NGS_StringData( self -> run_name, ctx ), NGS_StringSize( self->run_na… in CSRA1_ReadCollectionGetAlignment() 474 NGS_StringSize ( self -> run_name, ctx ), in CSRA1_ReadCollectionGetRead() 481 NGS_StringSize ( self -> run_name, ctx ), in CSRA1_ReadCollectionGetRead() [all …]
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H A D | CSRA1_Read.c | 110 TRY ( self -> run_name = NGS_StringDuplicate ( run_name, ctx ) ) in CSRA1_ReadInit() 140 const NGS_String * run_name, in CSRA1_ReadIteratorInit() argument 154 TRY ( self -> run_name = NGS_StringDuplicate ( run_name, ctx ) ) in CSRA1_ReadIteratorInit() 168 const NGS_String * run_name, in CSRA1_ReadIteratorMake() argument 182 …cating CSRA1_ReadIterator on '%.*s'", NGS_StringSize ( run_name, ctx ), NGS_StringData ( run_name,… in CSRA1_ReadIteratorMake() 187 …tname, sizeof instname, NULL, "%.*s", NGS_StringSize ( run_name, ctx ), NGS_StringData ( run_name,… in CSRA1_ReadIteratorMake() 216 const NGS_String * run_name, in CSRA1_ReadIteratorMakeRange() argument 232 …cating CSRA1_ReadIterator on '%.*s'", NGS_StringSize ( run_name, ctx ), NGS_StringData ( run_name,… in CSRA1_ReadIteratorMakeRange() 237 …tname, sizeof instname, NULL, "%.*s", NGS_StringSize ( run_name, ctx ), NGS_StringData ( run_name,… in CSRA1_ReadIteratorMakeRange() 308 …ing SRA_Read(%lu) on '%.*s'", readId, NGS_StringSize ( run_name, ctx ), NGS_StringData ( run_name,… in CSRA1_ReadMake() [all …]
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H A D | SRA_ReadCollection.c | 67 const NGS_String * run_name; member 77 NGS_StringRelease ( self -> run_name, ctx ); in SRA_ReadCollectionWhack() 86 return NGS_StringDuplicate ( self -> run_name, ctx ); in SRA_ReadCollectionGetName() 195 … NGS_AlignmentMakeNull ( ctx, NGS_StringData(self -> run_name, ctx), NGS_StringSize(self -> run_na… in SRA_ReadCollectionGetAlignments() 224 … NGS_AlignmentMakeNull ( ctx, NGS_StringData(self -> run_name, ctx), NGS_StringSize(self -> run_na… in SRA_ReadCollectionGetAlignmentRange() 234 return NGS_ReadMakeNull ( ctx, self -> run_name ); in SRA_ReadCollectionGetReads() 255 if ( string_cmp ( NGS_StringData ( self -> run_name, ctx ), in SRA_ReadCollectionGetRead() 256 NGS_StringSize ( self -> run_name, ctx ), in SRA_ReadCollectionGetRead() 263 NGS_StringSize ( self -> run_name, ctx ), in SRA_ReadCollectionGetRead() 264 NGS_StringData ( self -> run_name, ctx ), in SRA_ReadCollectionGetRead() [all …]
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H A D | SRA_Read.c | 115 TRY ( self -> run_name = NGS_StringDuplicate ( run_name, ctx ) ) in SRA_ReadInit() 130 const NGS_String * run_name, in SRA_ReadIteratorInit() argument 143 TRY ( self -> run_name = NGS_StringDuplicate ( run_name, ctx ) ) in SRA_ReadIteratorInit() 160 NGS_StringRelease ( self -> run_name, ctx ); in SRA_ReadWhack() 229 …ing SRA_Read(%lu) on '%.*s'", readId, NGS_StringSize ( run_name, ctx ), NGS_StringData ( run_name,… in SRA_ReadMake() 234 …, sizeof instname, NULL, "%.*s(%lu)", NGS_StringSize ( run_name, ctx ), NGS_StringData ( run_name,… in SRA_ReadMake() 568 …locating NGS_ReadIterator on '%.*s'", NGS_StringSize ( run_name, ctx ), NGS_StringData ( run_name,… in SRA_ReadIteratorMake() 573 …tname, sizeof instname, NULL, "%.*s", NGS_StringSize ( run_name, ctx ), NGS_StringData ( run_name,… in SRA_ReadIteratorMake() 600 const NGS_String * run_name, in SRA_ReadIteratorMakeRange() argument 615 …locating NGS_ReadIterator on '%.*s'", NGS_StringSize ( run_name, ctx ), NGS_StringData ( run_name,… in SRA_ReadIteratorMakeRange() [all …]
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/dports/lang/v8/v8-9.6.180.12/tools/ |
H A D | perf-compare.py | 144 def getResult(self, run_name): argument 145 return self.runs_.get(run_name) 147 def appendResult(self, run_name, trace): argument 337 for run_name in run_names: 340 main_run = run_name 408 run_name = json_file_list[0] 409 if run_name.endswith(".json"): 411 run_name = os.path.splitext(run_name)[0] 421 run_names[run_name] = 0 457 for run_name in run_names: [all …]
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/dports/www/qt5-webengine/qtwebengine-everywhere-src-5.15.2/src/3rdparty/chromium/v8/tools/ |
H A D | perf-compare.py | 144 def getResult(self, run_name): argument 145 return self.runs_.get(run_name) 147 def appendResult(self, run_name, trace): argument 337 for run_name in run_names: 340 main_run = run_name 408 run_name = json_file_list[0] 409 if run_name.endswith(".json"): 411 run_name = os.path.splitext(run_name)[0] 421 run_names[run_name] = 0 457 for run_name in run_names: [all …]
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/dports/www/chromium-legacy/chromium-88.0.4324.182/v8/tools/ |
H A D | perf-compare.py | 144 def getResult(self, run_name): argument 145 return self.runs_.get(run_name) 147 def appendResult(self, run_name, trace): argument 337 for run_name in run_names: 340 main_run = run_name 408 run_name = json_file_list[0] 409 if run_name.endswith(".json"): 411 run_name = os.path.splitext(run_name)[0] 421 run_names[run_name] = 0 457 for run_name in run_names: [all …]
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/dports/www/node10/node-v10.24.1/deps/v8/tools/ |
H A D | perf-compare.py | 141 def getResult(self, run_name): argument 142 return self.runs_.get(run_name) 144 def appendResult(self, run_name, trace): argument 334 for run_name in run_names: 337 main_run = run_name 405 run_name = json_file_list[0] 406 if run_name.endswith(".json"): 408 run_name = os.path.splitext(run_name)[0] 418 run_names[run_name] = 0 454 for run_name in run_names: [all …]
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/dports/databases/py-sqlite3/Python-3.8.12/Lib/ |
H A D | runpy.py | 198 run_name=None, alter_sys=False): argument 204 if run_name is None: 205 run_name = mod_name 231 def _get_code_from_file(run_name, fname): argument 242 def run_path(path_name, init_globals=None, run_name=None): argument 252 if run_name is None: 253 run_name = "<run_path>" 254 pkg_name = run_name.rpartition(".")[0] 264 code, fname = _get_code_from_file(run_name, path_name) 265 return _run_module_code(code, init_globals, run_name, [all …]
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/dports/databases/py-gdbm/Python-3.8.12/Lib/ |
H A D | runpy.py | 198 run_name=None, alter_sys=False): argument 204 if run_name is None: 205 run_name = mod_name 231 def _get_code_from_file(run_name, fname): argument 242 def run_path(path_name, init_globals=None, run_name=None): argument 252 if run_name is None: 253 run_name = "<run_path>" 254 pkg_name = run_name.rpartition(".")[0] 264 code, fname = _get_code_from_file(run_name, path_name) 265 return _run_module_code(code, init_globals, run_name, [all …]
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/dports/lang/python310/Python-3.10.1/Lib/ |
H A D | runpy.py | 200 run_name=None, alter_sys=False): argument 206 if run_name is None: 207 run_name = mod_name 233 def _get_code_from_file(run_name, fname): argument 245 def run_path(path_name, init_globals=None, run_name=None): argument 255 if run_name is None: 256 run_name = "<run_path>" 257 pkg_name = run_name.rpartition(".")[0] 268 code, fname = _get_code_from_file(run_name, path_name) 269 return _run_module_code(code, init_globals, run_name, [all …]
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/dports/lang/python37/Python-3.7.12/Lib/ |
H A D | runpy.py | 196 run_name=None, alter_sys=False): argument 202 if run_name is None: 203 run_name = mod_name 229 def _get_code_from_file(run_name, fname): argument 239 def run_path(path_name, init_globals=None, run_name=None): argument 249 if run_name is None: 250 run_name = "<run_path>" 251 pkg_name = run_name.rpartition(".")[0] 261 code, fname = _get_code_from_file(run_name, path_name) 262 return _run_module_code(code, init_globals, run_name, [all …]
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/dports/lang/python-tools/Python-3.8.12/Lib/ |
H A D | runpy.py | 198 run_name=None, alter_sys=False): argument 204 if run_name is None: 205 run_name = mod_name 231 def _get_code_from_file(run_name, fname): argument 242 def run_path(path_name, init_globals=None, run_name=None): argument 252 if run_name is None: 253 run_name = "<run_path>" 254 pkg_name = run_name.rpartition(".")[0] 264 code, fname = _get_code_from_file(run_name, path_name) 265 return _run_module_code(code, init_globals, run_name, [all …]
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/dports/lang/python39/Python-3.9.9/Lib/ |
H A D | runpy.py | 201 run_name=None, alter_sys=False): argument 207 if run_name is None: 208 run_name = mod_name 234 def _get_code_from_file(run_name, fname): argument 245 def run_path(path_name, init_globals=None, run_name=None): argument 255 if run_name is None: 256 run_name = "<run_path>" 257 pkg_name = run_name.rpartition(".")[0] 267 code, fname = _get_code_from_file(run_name, path_name) 268 return _run_module_code(code, init_globals, run_name, [all …]
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/dports/x11-toolkits/py-tkinter/Python-3.8.12/Lib/ |
H A D | runpy.py | 198 run_name=None, alter_sys=False): argument 204 if run_name is None: 205 run_name = mod_name 231 def _get_code_from_file(run_name, fname): argument 242 def run_path(path_name, init_globals=None, run_name=None): argument 252 if run_name is None: 253 run_name = "<run_path>" 254 pkg_name = run_name.rpartition(".")[0] 264 code, fname = _get_code_from_file(run_name, path_name) 265 return _run_module_code(code, init_globals, run_name, [all …]
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/dports/lang/python311/Python-3.11.0a3/Lib/ |
H A D | runpy.py | 200 run_name=None, alter_sys=False): argument 206 if run_name is None: 207 run_name = mod_name 233 def _get_code_from_file(run_name, fname): argument 245 def run_path(path_name, init_globals=None, run_name=None): argument 255 if run_name is None: 256 run_name = "<run_path>" 257 pkg_name = run_name.rpartition(".")[0] 268 code, fname = _get_code_from_file(run_name, path_name) 269 return _run_module_code(code, init_globals, run_name, [all …]
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/dports/lang/python38/Python-3.8.12/Lib/ |
H A D | runpy.py | 198 run_name=None, alter_sys=False): argument 204 if run_name is None: 205 run_name = mod_name 231 def _get_code_from_file(run_name, fname): argument 242 def run_path(path_name, init_globals=None, run_name=None): argument 252 if run_name is None: 253 run_name = "<run_path>" 254 pkg_name = run_name.rpartition(".")[0] 264 code, fname = _get_code_from_file(run_name, path_name) 265 return _run_module_code(code, init_globals, run_name, [all …]
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