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Searched refs:sbeg (Results 1 – 25 of 160) sorted by relevance

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/dports/math/p5-Math-Prime-Util-GMP/Math-Prime-Util-GMP-0.52/t/
H A D27-clusters.t66 my($sbeg,$send) = (0, 100000);
73 my $small = [ [sieve_primes($sbeg,$send)], [sieve_twin_primes($sbeg,$send)] ];
82 my @sieve = sieve_prime_cluster($sbeg,$send,@pat);
83 my @tuple = ktuple($sbeg,$send,$small,@pat);
86 is_deeply( \@sieve, \@tuple, "Pattern [@pat] $num in range $sbeg .. $send");
/dports/biology/artemis/artemis-17.0.1-11-g3e43d27e/uk/ac/sanger/artemis/components/variant/
H A DGraphPanel.java81 int sbeg = vcfView.getBaseAtStartOfView(); in paintComponent() local
82 int send = sbeg+vcfView.getBasesInView(); in paintComponent()
95 int nBins = Math.round((send-sbeg+1.f)/windowSize); in paintComponent()
99 FeatureVector features = vcfView.getCDSFeaturesInRange(sbeg, send); in paintComponent()
109 max = countAll(i, readers[i], sbeg, send, windowSize, nBins, features, plot[i], max); in paintComponent()
122 max = countAll(i, readers[i], sbeg, send, windowSize, nBins, features, plot, max); in paintComponent()
231 if( (offset >= sbeg && offset < send) || in countAll()
232 (offset < sbeg && sbeg < nextOffset) ) in countAll()
234 int thisStart = sbeg - offset; in countAll()
256 BCFReaderIterator it = bcfReader.query(chr, sbeg, send); in count()
[all …]
H A DIOUtils.java765 int sbeg, int send) in getHeader() argument
789 int length = send-sbeg+1; in writeOrViewRange()
797 int sbegc = sbeg+i; in writeOrViewRange()
903 final int sbeg, in getAllBasesInRegion() argument
925 (offset < sbeg && sbeg < nextOffset) ) in getAllBasesInRegion()
974 int baseNum = sbeg; in getBasesInRegion()
1012 basesStr = maskSites(sbeg, len+sbeg, baseNum, isFwd, basesStr); in getBasesInRegion()
1031 int position = i-sbeg; in maskSites()
1091 (offset < sbeg && sbeg < nextOffset) ) in countVariants()
1326 int sbeg = 1; in createFeatures() local
[all …]
H A DBCFReader.java539 protected BCFReaderIterator query(String chr, int sbeg, int send) throws IOException in query() argument
541 return new BCFReaderIterator(chr, sbeg, send); in query()
547 private int sbeg; field in BCFReader.BCFReaderIterator
551 protected BCFReaderIterator(String chr, int sbeg, int send) in BCFReaderIterator() argument
554 this.sbeg = sbeg; in BCFReaderIterator()
566 long off = queryIndex(bid, sbeg); in seekPosition()
577 return nextRecord(chr, sbeg, send); in next()
586 int sbeg = 0; in main() local
595 sbeg = Integer.parseInt(rgn[0]); in main()
604 long off = reader.queryIndex(bid, sbeg); in main()
[all …]
H A DAbstractVCFReader.java64 public VCFRecord getNextRecord(String chr, int sbeg, int send) throws IOException in getNextRecord() argument
70 bcfIterator = ((BCFReader)this).query(chr, sbeg, send); in getNextRecord()
82 tabixIterator = ((TabixReader)this).query(chr+":"+sbeg+"-"+send); in getNextRecord()
86 … System.err.println(chr+":"+sbeg+"-"+send+" not found in "+((TabixReader)this).getFileName()); in getNextRecord()
166 int sbeg = 0; in write() local
170 while( (record = reader.nextRecord(null, sbeg, send)) != null) in write()
/dports/math/p5-Math-Prime-Util/Math-Prime-Util-0.73/t/
H A D11-clusters.t69 my($sbeg,$send) = (0, 100000);
71 $small = [ primes($sbeg,$send), twin_primes($sbeg,$send) ];
90 my @sieve = sieve_prime_cluster($sbeg,$send,@pat);
91 my @tuple = ktuple($sbeg,$send,$small,@pat);
94 is_deeply( \@sieve, \@tuple, "Pattern [@pat] $num in range $sbeg .. $send");
/dports/biology/emboss/EMBOSS-6.6.0/jemboss/org/emboss/jemboss/gui/sequenceChooser/
H A DInputSequenceAttributes.java41 private TextFieldInt sbeg = new TextFieldInt(); field in InputSequenceAttributes
103 sbeg.setPreferredSize(new Dimension(50, 28)); in InputSequenceAttributes()
104 sbeg.setMaximumSize(new Dimension(50, 28)); in InputSequenceAttributes()
159 bx.add(sbeg); in InputSequenceAttributes()
322 sbeg.setValue(iseq); in setBegSeq()
344 sbeg.setText(s); in setBegSeq()
366 return sbeg.getText(); in getBegSeq()
388 if(sbeg.getText() == null || in isBeginSeqDefault()
389 sbeg.getText().equals("") ) in isBeginSeqDefault()
404 sbeg.getText().equals("") ) in isEndSeqDefault()
[all …]
/dports/games/spellcast/spellcast/
H A Dxtext.c214 int sbeg, send; local
218 sbeg = (si->top)*si->h / si->nlines;
224 sbeg = 0;
228 if (sbeg>0) {
230 SCROLL_W-6, sbeg);
233 SCROLL_W-6, send-sbeg);
245 int sbeg, send; local
248 sbeg = (si->top)*si->h / si->nlines;
254 sbeg = 0;
258 if (ypos>=si->y+sbeg && ypos<si->y+send) {
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/dports/devel/avr-libc/avr-libc-2.0.0/libc/stdlib/
H A Ddtostre.c38 dtostre (double val, char *sbeg, unsigned char prec, unsigned char flags) in dtostre() argument
51 exp = __ftoa_engine (val, sbeg, prec, 0); in dtostre()
52 d = s = sbeg; in dtostre()
107 return sbeg; in dtostre()
/dports/databases/mariadb104-server/mariadb-10.4.24/strings/
H A Dctype-uca-scanner_next.inl88 if (scanner->sbeg < scanner->send && scanner->sbeg[0] < 0x80)
90 wc[0]= scanner->sbeg[0];
91 scanner->sbeg+= 1;
113 if (((mblen= MY_MB_WC(scanner, wc, scanner->sbeg,
116 if (scanner->sbeg >= scanner->send)
125 if ((scanner->sbeg+= scanner->cs->mbminlen) > scanner->send)
128 scanner->sbeg= scanner->send;
138 scanner->sbeg+= mblen;
/dports/databases/mariadb104-client/mariadb-10.4.24/strings/
H A Dctype-uca-scanner_next.inl88 if (scanner->sbeg < scanner->send && scanner->sbeg[0] < 0x80)
90 wc[0]= scanner->sbeg[0];
91 scanner->sbeg+= 1;
113 if (((mblen= MY_MB_WC(scanner, wc, scanner->sbeg,
116 if (scanner->sbeg >= scanner->send)
125 if ((scanner->sbeg+= scanner->cs->mbminlen) > scanner->send)
128 scanner->sbeg= scanner->send;
138 scanner->sbeg+= mblen;
/dports/databases/mariadb105-client/mariadb-10.5.15/strings/
H A Dctype-uca-scanner_next.inl88 if (scanner->sbeg < scanner->send && scanner->sbeg[0] < 0x80)
90 wc[0]= scanner->sbeg[0];
91 scanner->sbeg+= 1;
113 if (((mblen= MY_MB_WC(scanner, wc, scanner->sbeg,
116 if (scanner->sbeg >= scanner->send)
125 if ((scanner->sbeg+= scanner->cs->mbminlen) > scanner->send)
128 scanner->sbeg= scanner->send;
138 scanner->sbeg+= mblen;
/dports/databases/mariadb105-server/mariadb-10.5.15/strings/
H A Dctype-uca-scanner_next.inl88 if (scanner->sbeg < scanner->send && scanner->sbeg[0] < 0x80)
90 wc[0]= scanner->sbeg[0];
91 scanner->sbeg+= 1;
113 if (((mblen= MY_MB_WC(scanner, wc, scanner->sbeg,
116 if (scanner->sbeg >= scanner->send)
125 if ((scanner->sbeg+= scanner->cs->mbminlen) > scanner->send)
128 scanner->sbeg= scanner->send;
138 scanner->sbeg+= mblen;
/dports/lang/ruby26/ruby-2.6.9/sample/
H A Dexyacc.rb6 sbeg = source.index("\n%%") + 1
8 grammar = source[sbeg, send-sbeg]
/dports/science/py-segyio/segyio-1.9.8/applications/
H A Dsegyio-crop.c49 int sbeg, in delay_recording_time() argument
63 if( sbeg < 0 && send == INT_MAX ) return d; in delay_recording_time()
66 if( sbeg - t0 > 0 ) { in delay_recording_time()
67 long long skip = ((sbeg - t0) * 1000) / dt; in delay_recording_time()
189 int sbeg, send; member
203 opts.sbeg = -1, opts.send = INT_MAX; in parse_options()
300 ret = parseint( optarg, &opts.sbeg ); in parse_options()
351 int sbeg = opts.sbeg; in main() local
369 if( sbeg > send ) in main()
504 sbeg, in main()
/dports/science/segyio/segyio-1.9.8/applications/
H A Dsegyio-crop.c49 int sbeg, in delay_recording_time() argument
63 if( sbeg < 0 && send == INT_MAX ) return d; in delay_recording_time()
66 if( sbeg - t0 > 0 ) { in delay_recording_time()
67 long long skip = ((sbeg - t0) * 1000) / dt; in delay_recording_time()
189 int sbeg, send; member
203 opts.sbeg = -1, opts.send = INT_MAX; in parse_options()
300 ret = parseint( optarg, &opts.sbeg ); in parse_options()
351 int sbeg = opts.sbeg; in main() local
369 if( sbeg > send ) in main()
504 sbeg, in main()
/dports/biology/emboss/EMBOSS-6.6.0/doc/programs/master/emboss/apps/inc/
H A Dshowseq.usage7 % <b>showseq tembl:x13776 -sbeg 1 -send 100 </b>
34 % <b>showseq tembl:x13776 -sbeg 1 -send 120 </b>
78 % <b>showseq tembl:x13776 -sbeg 1 -send 100 -noname -nodesc -format 0 -thing S </b>
94 % <b>showseq tembl:x13776 -sbeg 1 -send 100 -format 1 -number </b>
110 % <b>showseq tembl:x13776 -sbeg 1 -send 100 -format 1 -number -offset 123 </b>
126 % <b>showseq tembl:x13776 -sbeg 1 -send 100 -format 1 -slower -upper "8-24,65-81" </b>
142 % <b>showseq tembl:x13776 -sbeg 1 -send 120 -format 5 -trans 25-49,66-76 </b>
158 % <b>showseq tembl:x13776 -sbeg 1 -send 100 -format 2 -send 120 -annotation "13-26 binding site 15-…
H A Dshowpep.usage7 % <b>showpep tsw:laci_ecoli -sbeg 1 -send 100 </b>
29 % <b>showpep tsw:laci_ecoli -sbeg 1 -send 120 </b>
59 % <b>showpep tsw:laci_ecoli -sbeg 1 -send 100 -noname -nodesc -format 0 -thing S </b>
91 % <b>showpep tsw:laci_ecoli -sbeg 1 -send 100 -format 1 -number </b>
107 % <b>showpep tsw:laci_ecoli -sbeg 1 -send 100 -format 1 -number -offset 123 </b>
123 % <b>showpep tsw:laci_ecoli -sbeg 1 -send 100 -format 1 -slower -upper "17-17,22-22" </b>
139 % <b>showpep tsw:laci_ecoli -sbeg 1 -send 100 -format 2 -send 120 -annotation "6-25 binding site 17…
/dports/devel/taskflow/taskflow-3.2.0/examples/
H A Dreduce.cpp31 auto sbeg = std::chrono::steady_clock::now(); in reduce() local
38 << std::chrono::duration_cast<std::chrono::microseconds>(send - sbeg).count() in reduce()
77 auto sbeg = std::chrono::steady_clock::now(); in transform_reduce() local
84 << std::chrono::duration_cast<std::chrono::microseconds>(send - sbeg).count() in transform_reduce()
/dports/math/sisl/SISL-SISL-4.6.0-44-g9114631/src/
H A Ds1611.c131 double sbeg[3], slutt[3], svect1[3], svect2[3], snorm[3]; local
195 sbeg[kp] = spoint[kp];
332 s6diff(sbeg, centerpt, idim, svect1);
354 s6diff(slutt, sbeg, idim, svect1);
371 s1303 (sbeg, aepsge, angle, centerpt, axis, idim, rc, &kstat);
444 s1602 (sbeg, slutt, ik, idim, astpar, &tpar, rc, &kstat);
/dports/graphics/urho3d/Urho3D-1.7.1/Source/ThirdParty/Assimp/code/
H A DFBXBinaryTokenizer.cpp325 const char* sbeg, *send; in ReadScope() local
326 ReadString(sbeg, send, input, cursor, end); in ReadScope()
328 output_tokens.push_back(new_Token(sbeg, send, TokenType_KEY, Offset(input, cursor) )); in ReadScope()
333 ReadData(sbeg, send, input, cursor, begin_cursor + prop_length); in ReadScope()
335 output_tokens.push_back(new_Token(sbeg, send, TokenType_DATA, Offset(input, cursor) )); in ReadScope()
/dports/games/doomsday/doomsday-2.3.1/doomsday/external/assimp/code/
H A DFBXBinaryTokenizer.cpp317 const char* sbeg, *send; in ReadScope() local
318 ReadString(sbeg, send, input, cursor, end); in ReadScope()
320 output_tokens.push_back(new_Token(sbeg, send, TokenType_KEY, Offset(input, cursor) )); in ReadScope()
325 ReadData(sbeg, send, input, cursor, begin_cursor + prop_length); in ReadScope()
327 output_tokens.push_back(new_Token(sbeg, send, TokenType_DATA, Offset(input, cursor) )); in ReadScope()
/dports/devel/godot-tools/godot-3.2.3-stable/thirdparty/assimp/code/FBX/
H A DFBXBinaryTokenizer.cpp369 const char* sbeg, *send; in ReadScope() local
370 ReadString(sbeg, send, input, cursor, end); in ReadScope()
372 output_tokens.push_back(new_Token(sbeg, send, TokenType_KEY, Offset(input, cursor) )); in ReadScope()
377 ReadData(sbeg, send, input, cursor, begin_cursor + prop_length); in ReadScope()
379 output_tokens.push_back(new_Token(sbeg, send, TokenType_DATA, Offset(input, cursor) )); in ReadScope()
/dports/devel/upp/upp/bazaar/plugin/assimp/code/FBX/
H A DFBXBinaryTokenizer.cpp369 const char* sbeg, *send; in ReadScope() local
370 ReadString(sbeg, send, input, cursor, end); in ReadScope()
372 output_tokens.push_back(new_Token(sbeg, send, TokenType_KEY, Offset(input, cursor) )); in ReadScope()
377 ReadData(sbeg, send, input, cursor, begin_cursor + prop_length); in ReadScope()
379 output_tokens.push_back(new_Token(sbeg, send, TokenType_DATA, Offset(input, cursor) )); in ReadScope()
/dports/devel/godot/godot-3.2.3-stable/thirdparty/assimp/code/FBX/
H A DFBXBinaryTokenizer.cpp369 const char* sbeg, *send; in ReadScope() local
370 ReadString(sbeg, send, input, cursor, end); in ReadScope()
372 output_tokens.push_back(new_Token(sbeg, send, TokenType_KEY, Offset(input, cursor) )); in ReadScope()
377 ReadData(sbeg, send, input, cursor, begin_cursor + prop_length); in ReadScope()
379 output_tokens.push_back(new_Token(sbeg, send, TokenType_DATA, Offset(input, cursor) )); in ReadScope()

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