/dports/math/p5-Math-Prime-Util-GMP/Math-Prime-Util-GMP-0.52/t/ |
H A D | 27-clusters.t | 66 my($sbeg,$send) = (0, 100000); 73 my $small = [ [sieve_primes($sbeg,$send)], [sieve_twin_primes($sbeg,$send)] ]; 82 my @sieve = sieve_prime_cluster($sbeg,$send,@pat); 83 my @tuple = ktuple($sbeg,$send,$small,@pat); 86 is_deeply( \@sieve, \@tuple, "Pattern [@pat] $num in range $sbeg .. $send");
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/dports/biology/artemis/artemis-17.0.1-11-g3e43d27e/uk/ac/sanger/artemis/components/variant/ |
H A D | GraphPanel.java | 81 int sbeg = vcfView.getBaseAtStartOfView(); in paintComponent() local 82 int send = sbeg+vcfView.getBasesInView(); in paintComponent() 95 int nBins = Math.round((send-sbeg+1.f)/windowSize); in paintComponent() 99 FeatureVector features = vcfView.getCDSFeaturesInRange(sbeg, send); in paintComponent() 109 max = countAll(i, readers[i], sbeg, send, windowSize, nBins, features, plot[i], max); in paintComponent() 122 max = countAll(i, readers[i], sbeg, send, windowSize, nBins, features, plot, max); in paintComponent() 231 if( (offset >= sbeg && offset < send) || in countAll() 232 (offset < sbeg && sbeg < nextOffset) ) in countAll() 234 int thisStart = sbeg - offset; in countAll() 256 BCFReaderIterator it = bcfReader.query(chr, sbeg, send); in count() [all …]
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H A D | IOUtils.java | 765 int sbeg, int send) in getHeader() argument 789 int length = send-sbeg+1; in writeOrViewRange() 797 int sbegc = sbeg+i; in writeOrViewRange() 903 final int sbeg, in getAllBasesInRegion() argument 925 (offset < sbeg && sbeg < nextOffset) ) in getAllBasesInRegion() 974 int baseNum = sbeg; in getBasesInRegion() 1012 basesStr = maskSites(sbeg, len+sbeg, baseNum, isFwd, basesStr); in getBasesInRegion() 1031 int position = i-sbeg; in maskSites() 1091 (offset < sbeg && sbeg < nextOffset) ) in countVariants() 1326 int sbeg = 1; in createFeatures() local [all …]
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H A D | BCFReader.java | 539 protected BCFReaderIterator query(String chr, int sbeg, int send) throws IOException in query() argument 541 return new BCFReaderIterator(chr, sbeg, send); in query() 547 private int sbeg; field in BCFReader.BCFReaderIterator 551 protected BCFReaderIterator(String chr, int sbeg, int send) in BCFReaderIterator() argument 554 this.sbeg = sbeg; in BCFReaderIterator() 566 long off = queryIndex(bid, sbeg); in seekPosition() 577 return nextRecord(chr, sbeg, send); in next() 586 int sbeg = 0; in main() local 595 sbeg = Integer.parseInt(rgn[0]); in main() 604 long off = reader.queryIndex(bid, sbeg); in main() [all …]
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H A D | AbstractVCFReader.java | 64 public VCFRecord getNextRecord(String chr, int sbeg, int send) throws IOException in getNextRecord() argument 70 bcfIterator = ((BCFReader)this).query(chr, sbeg, send); in getNextRecord() 82 tabixIterator = ((TabixReader)this).query(chr+":"+sbeg+"-"+send); in getNextRecord() 86 … System.err.println(chr+":"+sbeg+"-"+send+" not found in "+((TabixReader)this).getFileName()); in getNextRecord() 166 int sbeg = 0; in write() local 170 while( (record = reader.nextRecord(null, sbeg, send)) != null) in write()
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/dports/math/p5-Math-Prime-Util/Math-Prime-Util-0.73/t/ |
H A D | 11-clusters.t | 69 my($sbeg,$send) = (0, 100000); 71 $small = [ primes($sbeg,$send), twin_primes($sbeg,$send) ]; 90 my @sieve = sieve_prime_cluster($sbeg,$send,@pat); 91 my @tuple = ktuple($sbeg,$send,$small,@pat); 94 is_deeply( \@sieve, \@tuple, "Pattern [@pat] $num in range $sbeg .. $send");
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/dports/biology/emboss/EMBOSS-6.6.0/jemboss/org/emboss/jemboss/gui/sequenceChooser/ |
H A D | InputSequenceAttributes.java | 41 private TextFieldInt sbeg = new TextFieldInt(); field in InputSequenceAttributes 103 sbeg.setPreferredSize(new Dimension(50, 28)); in InputSequenceAttributes() 104 sbeg.setMaximumSize(new Dimension(50, 28)); in InputSequenceAttributes() 159 bx.add(sbeg); in InputSequenceAttributes() 322 sbeg.setValue(iseq); in setBegSeq() 344 sbeg.setText(s); in setBegSeq() 366 return sbeg.getText(); in getBegSeq() 388 if(sbeg.getText() == null || in isBeginSeqDefault() 389 sbeg.getText().equals("") ) in isBeginSeqDefault() 404 sbeg.getText().equals("") ) in isEndSeqDefault() [all …]
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/dports/games/spellcast/spellcast/ |
H A D | xtext.c | 214 int sbeg, send; local 218 sbeg = (si->top)*si->h / si->nlines; 224 sbeg = 0; 228 if (sbeg>0) { 230 SCROLL_W-6, sbeg); 233 SCROLL_W-6, send-sbeg); 245 int sbeg, send; local 248 sbeg = (si->top)*si->h / si->nlines; 254 sbeg = 0; 258 if (ypos>=si->y+sbeg && ypos<si->y+send) { [all …]
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/dports/devel/avr-libc/avr-libc-2.0.0/libc/stdlib/ |
H A D | dtostre.c | 38 dtostre (double val, char *sbeg, unsigned char prec, unsigned char flags) in dtostre() argument 51 exp = __ftoa_engine (val, sbeg, prec, 0); in dtostre() 52 d = s = sbeg; in dtostre() 107 return sbeg; in dtostre()
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/dports/databases/mariadb104-server/mariadb-10.4.24/strings/ |
H A D | ctype-uca-scanner_next.inl | 88 if (scanner->sbeg < scanner->send && scanner->sbeg[0] < 0x80) 90 wc[0]= scanner->sbeg[0]; 91 scanner->sbeg+= 1; 113 if (((mblen= MY_MB_WC(scanner, wc, scanner->sbeg, 116 if (scanner->sbeg >= scanner->send) 125 if ((scanner->sbeg+= scanner->cs->mbminlen) > scanner->send) 128 scanner->sbeg= scanner->send; 138 scanner->sbeg+= mblen;
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/dports/databases/mariadb104-client/mariadb-10.4.24/strings/ |
H A D | ctype-uca-scanner_next.inl | 88 if (scanner->sbeg < scanner->send && scanner->sbeg[0] < 0x80) 90 wc[0]= scanner->sbeg[0]; 91 scanner->sbeg+= 1; 113 if (((mblen= MY_MB_WC(scanner, wc, scanner->sbeg, 116 if (scanner->sbeg >= scanner->send) 125 if ((scanner->sbeg+= scanner->cs->mbminlen) > scanner->send) 128 scanner->sbeg= scanner->send; 138 scanner->sbeg+= mblen;
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/dports/databases/mariadb105-client/mariadb-10.5.15/strings/ |
H A D | ctype-uca-scanner_next.inl | 88 if (scanner->sbeg < scanner->send && scanner->sbeg[0] < 0x80) 90 wc[0]= scanner->sbeg[0]; 91 scanner->sbeg+= 1; 113 if (((mblen= MY_MB_WC(scanner, wc, scanner->sbeg, 116 if (scanner->sbeg >= scanner->send) 125 if ((scanner->sbeg+= scanner->cs->mbminlen) > scanner->send) 128 scanner->sbeg= scanner->send; 138 scanner->sbeg+= mblen;
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/dports/databases/mariadb105-server/mariadb-10.5.15/strings/ |
H A D | ctype-uca-scanner_next.inl | 88 if (scanner->sbeg < scanner->send && scanner->sbeg[0] < 0x80) 90 wc[0]= scanner->sbeg[0]; 91 scanner->sbeg+= 1; 113 if (((mblen= MY_MB_WC(scanner, wc, scanner->sbeg, 116 if (scanner->sbeg >= scanner->send) 125 if ((scanner->sbeg+= scanner->cs->mbminlen) > scanner->send) 128 scanner->sbeg= scanner->send; 138 scanner->sbeg+= mblen;
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/dports/lang/ruby26/ruby-2.6.9/sample/ |
H A D | exyacc.rb | 6 sbeg = source.index("\n%%") + 1 8 grammar = source[sbeg, send-sbeg]
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/dports/science/py-segyio/segyio-1.9.8/applications/ |
H A D | segyio-crop.c | 49 int sbeg, in delay_recording_time() argument 63 if( sbeg < 0 && send == INT_MAX ) return d; in delay_recording_time() 66 if( sbeg - t0 > 0 ) { in delay_recording_time() 67 long long skip = ((sbeg - t0) * 1000) / dt; in delay_recording_time() 189 int sbeg, send; member 203 opts.sbeg = -1, opts.send = INT_MAX; in parse_options() 300 ret = parseint( optarg, &opts.sbeg ); in parse_options() 351 int sbeg = opts.sbeg; in main() local 369 if( sbeg > send ) in main() 504 sbeg, in main()
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/dports/science/segyio/segyio-1.9.8/applications/ |
H A D | segyio-crop.c | 49 int sbeg, in delay_recording_time() argument 63 if( sbeg < 0 && send == INT_MAX ) return d; in delay_recording_time() 66 if( sbeg - t0 > 0 ) { in delay_recording_time() 67 long long skip = ((sbeg - t0) * 1000) / dt; in delay_recording_time() 189 int sbeg, send; member 203 opts.sbeg = -1, opts.send = INT_MAX; in parse_options() 300 ret = parseint( optarg, &opts.sbeg ); in parse_options() 351 int sbeg = opts.sbeg; in main() local 369 if( sbeg > send ) in main() 504 sbeg, in main()
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/dports/biology/emboss/EMBOSS-6.6.0/doc/programs/master/emboss/apps/inc/ |
H A D | showseq.usage | 7 % <b>showseq tembl:x13776 -sbeg 1 -send 100 </b> 34 % <b>showseq tembl:x13776 -sbeg 1 -send 120 </b> 78 % <b>showseq tembl:x13776 -sbeg 1 -send 100 -noname -nodesc -format 0 -thing S </b> 94 % <b>showseq tembl:x13776 -sbeg 1 -send 100 -format 1 -number </b> 110 % <b>showseq tembl:x13776 -sbeg 1 -send 100 -format 1 -number -offset 123 </b> 126 % <b>showseq tembl:x13776 -sbeg 1 -send 100 -format 1 -slower -upper "8-24,65-81" </b> 142 % <b>showseq tembl:x13776 -sbeg 1 -send 120 -format 5 -trans 25-49,66-76 </b> 158 % <b>showseq tembl:x13776 -sbeg 1 -send 100 -format 2 -send 120 -annotation "13-26 binding site 15-…
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H A D | showpep.usage | 7 % <b>showpep tsw:laci_ecoli -sbeg 1 -send 100 </b> 29 % <b>showpep tsw:laci_ecoli -sbeg 1 -send 120 </b> 59 % <b>showpep tsw:laci_ecoli -sbeg 1 -send 100 -noname -nodesc -format 0 -thing S </b> 91 % <b>showpep tsw:laci_ecoli -sbeg 1 -send 100 -format 1 -number </b> 107 % <b>showpep tsw:laci_ecoli -sbeg 1 -send 100 -format 1 -number -offset 123 </b> 123 % <b>showpep tsw:laci_ecoli -sbeg 1 -send 100 -format 1 -slower -upper "17-17,22-22" </b> 139 % <b>showpep tsw:laci_ecoli -sbeg 1 -send 100 -format 2 -send 120 -annotation "6-25 binding site 17…
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/dports/devel/taskflow/taskflow-3.2.0/examples/ |
H A D | reduce.cpp | 31 auto sbeg = std::chrono::steady_clock::now(); in reduce() local 38 << std::chrono::duration_cast<std::chrono::microseconds>(send - sbeg).count() in reduce() 77 auto sbeg = std::chrono::steady_clock::now(); in transform_reduce() local 84 << std::chrono::duration_cast<std::chrono::microseconds>(send - sbeg).count() in transform_reduce()
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/dports/math/sisl/SISL-SISL-4.6.0-44-g9114631/src/ |
H A D | s1611.c | 131 double sbeg[3], slutt[3], svect1[3], svect2[3], snorm[3]; local 195 sbeg[kp] = spoint[kp]; 332 s6diff(sbeg, centerpt, idim, svect1); 354 s6diff(slutt, sbeg, idim, svect1); 371 s1303 (sbeg, aepsge, angle, centerpt, axis, idim, rc, &kstat); 444 s1602 (sbeg, slutt, ik, idim, astpar, &tpar, rc, &kstat);
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/dports/graphics/urho3d/Urho3D-1.7.1/Source/ThirdParty/Assimp/code/ |
H A D | FBXBinaryTokenizer.cpp | 325 const char* sbeg, *send; in ReadScope() local 326 ReadString(sbeg, send, input, cursor, end); in ReadScope() 328 output_tokens.push_back(new_Token(sbeg, send, TokenType_KEY, Offset(input, cursor) )); in ReadScope() 333 ReadData(sbeg, send, input, cursor, begin_cursor + prop_length); in ReadScope() 335 output_tokens.push_back(new_Token(sbeg, send, TokenType_DATA, Offset(input, cursor) )); in ReadScope()
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/dports/games/doomsday/doomsday-2.3.1/doomsday/external/assimp/code/ |
H A D | FBXBinaryTokenizer.cpp | 317 const char* sbeg, *send; in ReadScope() local 318 ReadString(sbeg, send, input, cursor, end); in ReadScope() 320 output_tokens.push_back(new_Token(sbeg, send, TokenType_KEY, Offset(input, cursor) )); in ReadScope() 325 ReadData(sbeg, send, input, cursor, begin_cursor + prop_length); in ReadScope() 327 output_tokens.push_back(new_Token(sbeg, send, TokenType_DATA, Offset(input, cursor) )); in ReadScope()
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/dports/devel/godot-tools/godot-3.2.3-stable/thirdparty/assimp/code/FBX/ |
H A D | FBXBinaryTokenizer.cpp | 369 const char* sbeg, *send; in ReadScope() local 370 ReadString(sbeg, send, input, cursor, end); in ReadScope() 372 output_tokens.push_back(new_Token(sbeg, send, TokenType_KEY, Offset(input, cursor) )); in ReadScope() 377 ReadData(sbeg, send, input, cursor, begin_cursor + prop_length); in ReadScope() 379 output_tokens.push_back(new_Token(sbeg, send, TokenType_DATA, Offset(input, cursor) )); in ReadScope()
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/dports/devel/upp/upp/bazaar/plugin/assimp/code/FBX/ |
H A D | FBXBinaryTokenizer.cpp | 369 const char* sbeg, *send; in ReadScope() local 370 ReadString(sbeg, send, input, cursor, end); in ReadScope() 372 output_tokens.push_back(new_Token(sbeg, send, TokenType_KEY, Offset(input, cursor) )); in ReadScope() 377 ReadData(sbeg, send, input, cursor, begin_cursor + prop_length); in ReadScope() 379 output_tokens.push_back(new_Token(sbeg, send, TokenType_DATA, Offset(input, cursor) )); in ReadScope()
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/dports/devel/godot/godot-3.2.3-stable/thirdparty/assimp/code/FBX/ |
H A D | FBXBinaryTokenizer.cpp | 369 const char* sbeg, *send; in ReadScope() local 370 ReadString(sbeg, send, input, cursor, end); in ReadScope() 372 output_tokens.push_back(new_Token(sbeg, send, TokenType_KEY, Offset(input, cursor) )); in ReadScope() 377 ReadData(sbeg, send, input, cursor, begin_cursor + prop_length); in ReadScope() 379 output_tokens.push_back(new_Token(sbeg, send, TokenType_DATA, Offset(input, cursor) )); in ReadScope()
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