/dports/databases/percona-toolkit/percona-toolkit-3.3.0/lib/ |
H A D | Schema.pm | 178 foreach my $search_db ( @search_dbs ) { 179 my @search_tbls = $tbl ? ($tbl) : keys %{$schema->{$search_db}}; 183 next DATABASE unless exists $schema->{$search_db}->{$search_tbl}; 188 PTDEBUG && _d('Ignoring', $search_db, $search_tbl, $col); 192 my $tbl = $schema->{$search_db}->{$search_tbl}; 241 foreach my $search_db ( @search_dbs ) { 242 if ( $ignore && grep { $_->{db} eq $search_db } @$ignore ) { 243 PTDEBUG && _d('Ignoring', $search_db); 247 if ( exists $schema->{$search_db}->{$tbl} ) { 248 PTDEBUG && _d('Table', $tbl, 'exists in', $search_db); [all …]
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/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/app/blast/ |
H A D | blast_app_util.cpp | 99 if (search_db.NotEmpty()) { in InitializeRemoteBlast() 198 _ASSERT(search_db.Empty()); in InitializeSubject() 205 _ASSERT(search_db.NotEmpty()); in InitializeSubject() 210 CRef<CSeqDB> seqdb = search_db->GetSeqDb(); in InitializeSubject() 211 db_adapter.Reset(new CLocalDbAdapter(*search_db)); in InitializeSubject() 227 if (search_db.NotEmpty()) { in InitializeSubject() 273 if (search_db.NotEmpty()) in s_InitializeExportStrategy() 452 search_db->SetEntrezQueryLimitation(limit); in s_ImportDatabase() 473 search_db->SetGiList(gilist); in s_ImportDatabase() 488 search_db->SetNegativeGiList(gilist); in s_ImportDatabase() [all …]
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H A D | blast_formatter.cpp | 267 CRef<CSearchDatabase> search_db = db_args->GetSearchDatabase(); in s_InitializeSubject() local 275 _ASSERT(search_db.Empty()); in s_InitializeSubject() 284 _ASSERT(search_db.NotEmpty()); in s_InitializeSubject() 289 CRef<CSeqDB> seqdb = search_db->GetSeqDb(); in s_InitializeSubject() 290 db_adapter.Reset(new CLocalDbAdapter(*search_db)); in s_InitializeSubject() 297 db_adapter.Reset(new CLocalDbAdapter(*search_db)); in s_InitializeSubject() 300 search_db->GetDatabaseName(), in s_InitializeSubject() 307 LOG_POST(Info <<"Remote " << search_db->GetDatabaseName()); in s_InitializeSubject() 378 search_db->SetGiList(gilist); in PrintFormattedOutput() 384 search_db->SetNegativeGiList(gilist); in PrintFormattedOutput() [all …]
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/dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/src/app/blast/ |
H A D | blast_app_util.cpp | 99 if (search_db.NotEmpty()) { in InitializeRemoteBlast() 214 _ASSERT(search_db.Empty()); in InitializeSubject() 221 _ASSERT(search_db.NotEmpty()); in InitializeSubject() 226 CRef<CSeqDB> seqdb = search_db->GetSeqDb(); in InitializeSubject() 227 db_adapter.Reset(new CLocalDbAdapter(*search_db)); in InitializeSubject() 243 if (search_db.NotEmpty()) { in InitializeSubject() 289 if (search_db.NotEmpty()) in s_InitializeExportStrategy() 468 search_db->SetEntrezQueryLimitation(limit); in s_ImportDatabase() 489 search_db->SetGiList(gilist); in s_ImportDatabase() 504 search_db->SetNegativeGiList(gilist); in s_ImportDatabase() [all …]
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H A D | blast_formatter.cpp | 267 CRef<CSearchDatabase> search_db = db_args->GetSearchDatabase(); in s_InitializeSubject() local 275 _ASSERT(search_db.Empty()); in s_InitializeSubject() 284 _ASSERT(search_db.NotEmpty()); in s_InitializeSubject() 289 CRef<CSeqDB> seqdb = search_db->GetSeqDb(); in s_InitializeSubject() 290 db_adapter.Reset(new CLocalDbAdapter(*search_db)); in s_InitializeSubject() 297 db_adapter.Reset(new CLocalDbAdapter(*search_db)); in s_InitializeSubject() 300 search_db->GetDatabaseName(), in s_InitializeSubject() 307 LOG_POST(Info <<"Remote " << search_db->GetDatabaseName()); in s_InitializeSubject() 378 search_db->SetGiList(gilist); in PrintFormattedOutput() 384 search_db->SetNegativeGiList(gilist); in PrintFormattedOutput() [all …]
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/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/app/magicblast/ |
H A D | magicblast_thread.cpp | 129 CRef<CSearchDatabase> search_db; in Main() local 134 search_db.Reset(new CSearchDatabase(kDbName, in Main() 145 search_db->SetGiList(gilist.GetNonNullPointer()); in Main() 148 search_db->SetNegativeGiList( in Main() 155 search_db->GetSeqDb()->SetNumberOfThreads(1, true); in Main() 157 thread_db_adapter.Reset(new CLocalDbAdapter(*search_db)); in Main()
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H A D | magicblast_app.cpp | 235 CRef<CSearchDatabase> search_db = db_args->GetSearchDatabase(); in s_InitializeSubject() local 247 _ASSERT(search_db.Empty()); in s_InitializeSubject() 255 _ASSERT(search_db.NotEmpty()); in s_InitializeSubject() 256 subject_length = search_db->GetSeqDb()->GetTotalLength(); in s_InitializeSubject() 257 num_sequences = search_db->GetSeqDb()->GetNumSeqs(); in s_InitializeSubject() 258 db_adapter.Reset(new CLocalDbAdapter(*search_db)); in s_InitializeSubject()
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/dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/src/algo/blast/unit_tests/blast_format/ |
H A D | build_archive_unit_test.cpp | 82 … CRef<CSearchDatabase> search_db(new CSearchDatabase("nt", CSearchDatabase::eBlastDbIsNucleotide)); in BOOST_AUTO_TEST_CASE() local 87 search_db); in BOOST_AUTO_TEST_CASE() 158 … CRef<CSearchDatabase> search_db(new CSearchDatabase("nt", CSearchDatabase::eBlastDbIsNucleotide)); in BOOST_AUTO_TEST_CASE() local 164 search_db->SetGiList(gilist.GetPointer()); in BOOST_AUTO_TEST_CASE() 169 search_db); in BOOST_AUTO_TEST_CASE()
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/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/algo/blast/unit_tests/blast_format/ |
H A D | build_archive_unit_test.cpp | 82 … CRef<CSearchDatabase> search_db(new CSearchDatabase("nt", CSearchDatabase::eBlastDbIsNucleotide)); in BOOST_AUTO_TEST_CASE() local 87 search_db); in BOOST_AUTO_TEST_CASE() 158 … CRef<CSearchDatabase> search_db(new CSearchDatabase("nt", CSearchDatabase::eBlastDbIsNucleotide)); in BOOST_AUTO_TEST_CASE() local 164 search_db->SetGiList(gilist.GetPointer()); in BOOST_AUTO_TEST_CASE() 169 search_db); in BOOST_AUTO_TEST_CASE()
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/dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/src/algo/blast/format/ |
H A D | build_archive.cpp | 159 CRef<CSearchDatabase> search_db, in BlastBuildArchive() argument 166 …export_strategy.Reset(new CExportStrategy(iquery_ref, options_ref, search_db, kEmptyStr, num_iters… in BlastBuildArchive() 168 export_strategy.Reset(new CExportStrategy(iquery_ref, options_ref, search_db)); in BlastBuildArchive() 193 CRef<CSearchDatabase> search_db, in BlastBuildArchive() argument 198 …CRef<CExportStrategy> export_strategy(new CExportStrategy(pssm_ref, options_ref, search_db, kEmpty… in BlastBuildArchive()
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/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/algo/blast/format/ |
H A D | build_archive.cpp | 159 CRef<CSearchDatabase> search_db, in BlastBuildArchive() argument 166 …export_strategy.Reset(new CExportStrategy(iquery_ref, options_ref, search_db, kEmptyStr, num_iters… in BlastBuildArchive() 168 export_strategy.Reset(new CExportStrategy(iquery_ref, options_ref, search_db)); in BlastBuildArchive() 193 CRef<CSearchDatabase> search_db, in BlastBuildArchive() argument 198 …CRef<CExportStrategy> export_strategy(new CExportStrategy(pssm_ref, options_ref, search_db, kEmpty… in BlastBuildArchive()
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/dports/lang/erlang-runtime23/otp-OTP-23.3.4.10/lib/ssl/src/ |
H A D | ssl_crl.erl | 52 case search_db(IsIssuerFun, Db, DbRef) of 77 search_db(IsIssuerFun, _, {extracted, ExtractedCerts})-> function 79 search_db(IsIssuerFun, Db, DbRef) -> function
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/dports/lang/erlang-runtime24/otp-OTP-24.1.7/lib/ssl/src/ |
H A D | ssl_crl.erl | 52 case search_db(IsIssuerFun, Db, DbRef) of 77 search_db(IsIssuerFun, _, {extracted, ExtractedCerts})-> function 79 search_db(IsIssuerFun, Db, DbRef) -> function
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/dports/lang/erlang-wx/otp-OTP-24.1.7/lib/ssl/src/ |
H A D | ssl_crl.erl | 52 case search_db(IsIssuerFun, Db, DbRef) of 77 search_db(IsIssuerFun, _, {extracted, ExtractedCerts})-> function 79 search_db(IsIssuerFun, Db, DbRef) -> function
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/dports/lang/erlang/otp-OTP-24.1.7/lib/ssl/src/ |
H A D | ssl_crl.erl | 52 case search_db(IsIssuerFun, Db, DbRef) of 77 search_db(IsIssuerFun, _, {extracted, ExtractedCerts})-> function 79 search_db(IsIssuerFun, Db, DbRef) -> function
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/dports/lang/erlang-java/otp-OTP-24.1.7/lib/ssl/src/ |
H A D | ssl_crl.erl | 52 case search_db(IsIssuerFun, Db, DbRef) of 77 search_db(IsIssuerFun, _, {extracted, ExtractedCerts})-> function 79 search_db(IsIssuerFun, Db, DbRef) -> function
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/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/include/algo/blast/format/ |
H A D | build_archive.hpp | 71 CRef<CSearchDatabase> search_db, 95 CRef<CSearchDatabase> search_db,
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/dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/include/algo/blast/format/ |
H A D | build_archive.hpp | 71 CRef<CSearchDatabase> search_db, 95 CRef<CSearchDatabase> search_db,
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/dports/databases/db18/db-18.1.40/test/tcl/ |
H A D | sec001.tcl | 52 error_check_good search_db [findstring $data $testfile2] 0 66 error_check_good search_db [findstring $data $testfile2] 1 203 error_check_good search_db [findstring $data $testdir/$testfile1] 0 274 error_check_good search_db [findstring $data $testdir/$testfile1] 1
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/dports/science/dakota/dakota-6.13.0-release-public.src-UI/src/ |
H A D | HierarchSurrBasedLocalMinimizer.hpp | 112 void find_center_truth(size_t tr_index, bool search_db = false); 116 void find_star_truth(size_t tr_index, bool search_db = false);
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H A D | HierarchSurrBasedLocalMinimizer.cpp | 511 find_center_truth(size_t tr_index, bool search_db) in find_center_truth() argument 518 if (search_db) in find_center_truth() 543 find_star_truth(size_t tr_index, bool search_db) in find_star_truth() argument 550 if (search_db) in find_star_truth()
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/dports/databases/evolution-data-server/evolution-data-server-3.42.1/src/addressbook/libedata-book/ |
H A D | e-book-backend-sqlitedb-test.c | 90 search_db (EBookBackendSqliteDB *ebsdb, in search_db() function 158 search_db (ebsdb, "summary query", sexp); in start_tests()
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/dports/security/nmap/nmap-7.91/zenmap/zenmapCore/ |
H A D | UmitConf.py | 107 self.search_db = True 158 def set_search_db(self, search_db): argument 159 self._set_it("search_db", self.boolean_sanity(search_db)) 182 search_db = property(get_search_db, set_search_db) variable in SearchConfig
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/dports/security/nmap/nmap-7.91/zenmap/zenmapGUI/ |
H A D | SearchGUI.py | 158 self.options["search_db"] = search_config.search_db 170 self.search_db = SearchDB() 172 self.search_db = SearchDummy() 429 total += len(self.search_db.get_scan_results()) 430 for result in self.search_db.search(**self.search_dict):
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/dports/security/nmap/nmap-7.91/zenmap/share/zenmap/config/ |
H A D | zenmap.conf | 73 search_db = 1
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