/dports/biology/py-biopython/biopython-1.79/Bio/SwissProt/ |
H A D | __init__.py | 782 first_seq, second_seq = description.split(" -> ") 789 extra_info_pos = second_seq.find(" (") 791 extra_info = second_seq[extra_info_pos:] 792 second_seq = second_seq[:extra_info_pos] 795 second_seq = second_seq.replace(" ", "") 797 description = first_seq + " -> " + second_seq + extra_info 839 first_seq, second_seq = description.split(" -> ") 846 extra_info_pos = second_seq.find(" (") 848 extra_info = second_seq[extra_info_pos:] 849 second_seq = second_seq[:extra_info_pos] [all …]
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/dports/biology/py-hits/hits-0.1/hits/ |
H A D | adapters_cython.pyx | 22 cpdef simple_hamming_distance(char *first_seq, char *second_seq): argument 23 return adapter_hamming_distance(first_seq, second_seq, len(first_seq), len(second_seq), 0)
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/dports/biology/emboss/EMBOSS-6.6.0/emboss/ |
H A D | union.c | 187 const AjPSeq second_seq) in union_GetOverlap() argument 190 const AjPStr second_seq_str = ajSeqGetSeqS(second_seq); in union_GetOverlap()
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/dports/biology/py-biopython/biopython-1.79/Tests/ |
H A D | test_align.py | 616 second_seq = alignment[1].seq 617 matrix = align_info.pos_specific_score_matrix(second_seq, ["N", "-"])
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/dports/lang/python-legacy/Python-2.7.18/Lib/unittest/ |
H A D | case.py | 877 first_seq, second_seq = list(expected_seq), list(actual_seq) 887 second = collections.Counter(second_seq) 890 differences = _count_diff_all_purpose(first_seq, second_seq) 894 differences = _count_diff_hashable(first_seq, second_seq)
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/dports/lang/python27/Python-2.7.18/Lib/unittest/ |
H A D | case.py | 877 first_seq, second_seq = list(expected_seq), list(actual_seq) 887 second = collections.Counter(second_seq) 890 differences = _count_diff_all_purpose(first_seq, second_seq) 894 differences = _count_diff_hashable(first_seq, second_seq)
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/dports/java/eclipse-pydev/eclipse-pydev-8.2.0/plugins/org.python.pydev.jython_8.2.0.202102211157/Lib/unittest/ |
H A D | case.py | 879 first_seq, second_seq = list(expected_seq), list(actual_seq) 889 second = collections.Counter(second_seq) 892 differences = _count_diff_all_purpose(first_seq, second_seq) 896 differences = _count_diff_hashable(first_seq, second_seq)
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/dports/sysutils/uefi-edk2-bhyve-csm/uefi-edk2-aa8d718/AppPkg/Applications/Python/Python-2.7.2/Lib/unittest/ |
H A D | case.py | 872 first_seq, second_seq = list(actual_seq), list(expected_seq) 882 second = collections.Counter(second_seq) 885 differences = _count_diff_all_purpose(first_seq, second_seq) 889 differences = _count_diff_hashable(first_seq, second_seq)
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/dports/lang/python310/Python-3.10.1/Lib/unittest/ |
H A D | case.py | 1188 first_seq, second_seq = list(first), list(second) 1191 second = collections.Counter(second_seq) 1194 differences = _count_diff_all_purpose(first_seq, second_seq) 1198 differences = _count_diff_hashable(first_seq, second_seq)
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/dports/lang/python39/Python-3.9.9/Lib/unittest/ |
H A D | case.py | 1179 first_seq, second_seq = list(first), list(second) 1182 second = collections.Counter(second_seq) 1185 differences = _count_diff_all_purpose(first_seq, second_seq) 1189 differences = _count_diff_hashable(first_seq, second_seq)
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/dports/lang/python311/Python-3.11.0a3/Lib/unittest/ |
H A D | case.py | 1154 first_seq, second_seq = list(first), list(second) 1157 second = collections.Counter(second_seq) 1160 differences = _count_diff_all_purpose(first_seq, second_seq) 1164 differences = _count_diff_hashable(first_seq, second_seq)
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/dports/databases/py-gdbm/Python-3.8.12/Lib/unittest/ |
H A D | case.py | 1254 first_seq, second_seq = list(first), list(second) 1257 second = collections.Counter(second_seq) 1260 differences = _count_diff_all_purpose(first_seq, second_seq) 1264 differences = _count_diff_hashable(first_seq, second_seq)
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/dports/lang/python37/Python-3.7.12/Lib/unittest/ |
H A D | case.py | 1195 first_seq, second_seq = list(first), list(second) 1198 second = collections.Counter(second_seq) 1201 differences = _count_diff_all_purpose(first_seq, second_seq) 1205 differences = _count_diff_hashable(first_seq, second_seq)
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/dports/lang/python-tools/Python-3.8.12/Lib/unittest/ |
H A D | case.py | 1254 first_seq, second_seq = list(first), list(second) 1257 second = collections.Counter(second_seq) 1260 differences = _count_diff_all_purpose(first_seq, second_seq) 1264 differences = _count_diff_hashable(first_seq, second_seq)
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/dports/lang/python38/Python-3.8.12/Lib/unittest/ |
H A D | case.py | 1254 first_seq, second_seq = list(first), list(second) 1257 second = collections.Counter(second_seq) 1260 differences = _count_diff_all_purpose(first_seq, second_seq) 1264 differences = _count_diff_hashable(first_seq, second_seq)
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/dports/databases/py-sqlite3/Python-3.8.12/Lib/unittest/ |
H A D | case.py | 1254 first_seq, second_seq = list(first), list(second) 1257 second = collections.Counter(second_seq) 1260 differences = _count_diff_all_purpose(first_seq, second_seq) 1264 differences = _count_diff_hashable(first_seq, second_seq)
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/dports/x11-toolkits/py-tkinter/Python-3.8.12/Lib/unittest/ |
H A D | case.py | 1254 first_seq, second_seq = list(first), list(second) 1257 second = collections.Counter(second_seq) 1260 differences = _count_diff_all_purpose(first_seq, second_seq) 1264 differences = _count_diff_hashable(first_seq, second_seq)
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/dports/converters/wkhtmltopdf/qt-5db36ec/tests/auto/xmlpatterns/ |
H A D | XSLTTODO | 1302 <xsl:with-param name="second_seq" as="xs:string"> 1309 <xsl:param name="second_seq">def</xsl:param> 1310 <xsl:sequence select="$second_seq instance of xs:string"/>
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/dports/biology/py-biopython/biopython-1.79/Doc/Tutorial/ |
H A D | chapter_cookbook.tex | 1500 second_seq = alignment.get_seq_by_num(1) 1501 my_pssm = summary_align.pos_specific_score_matrix(second_seq, chars_to_ignore=["N"])
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/dports/devel/avr-gcc/gcc-10.2.0/gcc/ |
H A D | gimplify.c | 14826 gimple_seq second_seq = NULL; in gimplify_body() local 14830 second_seq = gsi_split_seq_after (gsi); in gimplify_body() 14838 second_seq = seq; in gimplify_body() 14843 gimple_seq_add_seq_without_update (&seq, second_seq); in gimplify_body()
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/dports/lang/gcc11-devel/gcc-11-20211009/gcc/ |
H A D | gimplify.c | 15339 gimple_seq second_seq = NULL; in gimplify_body() local 15343 second_seq = gsi_split_seq_after (gsi); in gimplify_body() 15351 second_seq = seq; in gimplify_body() 15356 gimple_seq_add_seq_without_update (&seq, second_seq); in gimplify_body()
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/dports/lang/gcc10-devel/gcc-10-20211008/gcc/ |
H A D | gimplify.c | 14866 gimple_seq second_seq = NULL; in gimplify_body() local 14870 second_seq = gsi_split_seq_after (gsi); in gimplify_body() 14878 second_seq = seq; in gimplify_body() 14883 gimple_seq_add_seq_without_update (&seq, second_seq); in gimplify_body()
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/dports/misc/cxx_atomics_pic/gcc-11.2.0/gcc/ |
H A D | gimplify.c | 15339 gimple_seq second_seq = NULL; in gimplify_body() local 15343 second_seq = gsi_split_seq_after (gsi); in gimplify_body() 15351 second_seq = seq; in gimplify_body() 15356 gimple_seq_add_seq_without_update (&seq, second_seq); in gimplify_body()
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/dports/lang/gcc10/gcc-10.3.0/gcc/ |
H A D | gimplify.c | 14866 gimple_seq second_seq = NULL; in gimplify_body() local 14870 second_seq = gsi_split_seq_after (gsi); in gimplify_body() 14878 second_seq = seq; in gimplify_body() 14883 gimple_seq_add_seq_without_update (&seq, second_seq); in gimplify_body()
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/dports/lang/gcc11/gcc-11.2.0/gcc/ |
H A D | gimplify.c | 15339 gimple_seq second_seq = NULL; in gimplify_body() local 15343 second_seq = gsi_split_seq_after (gsi); in gimplify_body() 15351 second_seq = seq; in gimplify_body() 15356 gimple_seq_add_seq_without_update (&seq, second_seq); in gimplify_body()
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