Searched refs:seenDiags (Results 1 – 2 of 2) sorted by relevance
1667 EIvalMergeListBinned& seenDiags = anchor1 ? seenDiags1_ : seenDiags2_; in extendSeedsPaired() local1670 if(seenDiags.locusPresent(refcoord)) { in extendSeedsPaired()1737 seenDiags.add(refival); in extendSeedsPaired()1754 seenDiags.add(refival); in extendSeedsPaired()1783 seenDiags.add(Interval(refcoord, 1)); in extendSeedsPaired()1830 seenDiags.add(refival); in extendSeedsPaired()
2196 EIvalMergeListBinned& seenDiags = anchor1 ? seenDiags1_ : seenDiags2_; in extendSeedsPaired() local2199 if(seenDiags.locusPresent(refcoord)) { in extendSeedsPaired()2263 seenDiags.add(refival); in extendSeedsPaired()2280 seenDiags.add(refival); in extendSeedsPaired()2309 seenDiags.add(Interval(refcoord, 1)); in extendSeedsPaired()2356 seenDiags.add(refival); in extendSeedsPaired()