| /dports/biology/sra-tools/sra-tools-2.11.0/ncbi-vdb/libs/ngs/ |
| H A D | CSRA1_Alignment.c | 164 bool seen_first; member
339 if ( ! self -> seen_first ) in CSRA1_AlignmentGetAlignmentId()
365 if ( ! self -> seen_first ) in CSRA1_AlignmentGetReferenceSpec()
377 if ( ! self -> seen_first ) in CSRA1_AlignmentGetMappingQuality()
388 if ( ! self -> seen_first ) in CSRA1_AlignmentGetReadFilter()
400 if ( ! self -> seen_first ) in CSRA1_AlignmentGetReferenceBases()
411 if ( ! self -> seen_first ) in CSRA1_AlignmentGetReadGroup()
434 if ( ! self -> seen_first ) in CSRA1_AlignmentGetReadId()
452 if ( ! self -> seen_first ) in CSRA1_AlignmentGetClippedFragmentBases()
464 if ( ! self -> seen_first ) in CSRA1_AlignmentGetClippedFragmentQualities()
[all …]
|
| H A D | SRA_ReadGroup.c | 70 bool seen_first; member
145 if ( ! self -> seen_first ) in SRA_ReadGroupGetName()
163 if ( ! self -> seen_first ) in SRA_ReadGroupGetReads()
193 if ( ! self -> seen_first ) in SRA_ReadGroupGetRead()
257 if ( ! self -> seen_first ) in SRA_ReadGroupGetStatistics()
325 ref -> seen_first = true; in SRA_ReadGroupMake()
399 if ( self -> seen_first ) in SRA_ReadGroupIteratorNext()
405 self -> seen_first = true; in SRA_ReadGroupIteratorNext()
|
| H A D | CSRA1_Reference.c | 134 bool seen_first; member
192 if ( ! self -> seen_first ) in CSRA1_ReferenceGetCommonName()
206 if ( ! self -> seen_first ) in CSRA1_ReferenceGetCanonicalName()
226 if ( ! self -> seen_first ) in CSRA1_ReferenceGetIsCircular()
278 if ( ! self -> seen_first ) in CSRA1_ReferenceGetLength()
306 if ( ! self -> seen_first ) in CSRA1_ReferenceGetBases()
423 if ( ! self -> seen_first ) in CSRA1_ReferenceGetAlignment()
472 if ( ! self -> seen_first ) in CSRA1_ReferenceGetAlignments()
655 if ( ! self -> seen_first ) in CSRA1_ReferenceGetAlignmentSlice()
739 if ( ! self -> seen_first ) in CSRA1_ReferenceGetPileups()
[all …]
|
| H A D | SRA_Read.c | 278 if ( ! self -> seen_first ) in SRA_ReadGetId()
300 if ( ! self -> seen_first ) in SRA_ReadGetName()
329 if ( ! self -> seen_first ) in SRA_ReadGetReadGroup()
344 if ( ! self -> seen_first ) in SRA_ReadGetCategory()
402 if ( ! self -> seen_first ) in SRA_ReadGetSequence()
476 if ( ! self -> seen_first ) in SRA_ReadGetQualities()
503 if ( ! self -> seen_first ) in SRA_ReadNumFragments()
526 if ( ! self -> seen_first ) in SRA_ReadFragIsAligned()
698 if ( self -> seen_first ) in SRA_ReadIteratorNext()
704 self -> seen_first = true; in SRA_ReadIteratorNext()
[all …]
|
| H A D | CSRA1_Read.c | 337 ref -> seen_first = true; in CSRA1_ReadMake()
360 if ( ! self -> seen_first ) in CSRA1_FragmentIsAligned()
413 if ( ! self -> seen_first ) in CSRA1_ReadFragIsAligned()
497 if ( self -> seen_first ) in CSRA1_ReadIteratorNext()
503 self -> seen_first = true; in CSRA1_ReadIteratorNext()
|
| H A D | CSRA1_PileupEvent.c | 61 if ( ! self -> seen_first ) in CSRA1_PileupEventStateTest()
876 if ( ! self -> seen_first ) in CSRA1_PileupEventIteratorNext()
877 self -> seen_first = true; in CSRA1_PileupEventIteratorNext()
912 self -> seen_first = false; in CSRA1_PileupEventIteratorReset()
|
| H A D | SRA_Read.h | 97 bool seen_first; member
|
| H A D | CSRA1_ReferenceWindow.c | 112 bool seen_first; member
162 if ( self -> seen_first && in GetAlignment()
927 if ( ! self -> seen_first ) in CSRA1_ReferenceWindowIteratorNext()
929 self -> seen_first = true; in CSRA1_ReferenceWindowIteratorNext()
|
| H A D | CSRA1_Pileup.h | 172 bool seen_first; member
|
| /dports/biology/ncbi-vdb/ncbi-vdb-2.11.0/libs/ngs/ |
| H A D | CSRA1_Alignment.c | 164 bool seen_first; member
339 if ( ! self -> seen_first ) in CSRA1_AlignmentGetAlignmentId()
365 if ( ! self -> seen_first ) in CSRA1_AlignmentGetReferenceSpec()
377 if ( ! self -> seen_first ) in CSRA1_AlignmentGetMappingQuality()
388 if ( ! self -> seen_first ) in CSRA1_AlignmentGetReadFilter()
400 if ( ! self -> seen_first ) in CSRA1_AlignmentGetReferenceBases()
411 if ( ! self -> seen_first ) in CSRA1_AlignmentGetReadGroup()
434 if ( ! self -> seen_first ) in CSRA1_AlignmentGetReadId()
452 if ( ! self -> seen_first ) in CSRA1_AlignmentGetClippedFragmentBases()
464 if ( ! self -> seen_first ) in CSRA1_AlignmentGetClippedFragmentQualities()
[all …]
|
| H A D | SRA_ReadGroup.c | 70 bool seen_first; member
145 if ( ! self -> seen_first ) in SRA_ReadGroupGetName()
163 if ( ! self -> seen_first ) in SRA_ReadGroupGetReads()
193 if ( ! self -> seen_first ) in SRA_ReadGroupGetRead()
257 if ( ! self -> seen_first ) in SRA_ReadGroupGetStatistics()
325 ref -> seen_first = true; in SRA_ReadGroupMake()
399 if ( self -> seen_first ) in SRA_ReadGroupIteratorNext()
405 self -> seen_first = true; in SRA_ReadGroupIteratorNext()
|
| H A D | CSRA1_Reference.c | 134 bool seen_first; member
192 if ( ! self -> seen_first ) in CSRA1_ReferenceGetCommonName()
206 if ( ! self -> seen_first ) in CSRA1_ReferenceGetCanonicalName()
226 if ( ! self -> seen_first ) in CSRA1_ReferenceGetIsCircular()
278 if ( ! self -> seen_first ) in CSRA1_ReferenceGetLength()
306 if ( ! self -> seen_first ) in CSRA1_ReferenceGetBases()
423 if ( ! self -> seen_first ) in CSRA1_ReferenceGetAlignment()
472 if ( ! self -> seen_first ) in CSRA1_ReferenceGetAlignments()
655 if ( ! self -> seen_first ) in CSRA1_ReferenceGetAlignmentSlice()
739 if ( ! self -> seen_first ) in CSRA1_ReferenceGetPileups()
[all …]
|
| H A D | SRA_Read.c | 278 if ( ! self -> seen_first ) in SRA_ReadGetId()
300 if ( ! self -> seen_first ) in SRA_ReadGetName()
329 if ( ! self -> seen_first ) in SRA_ReadGetReadGroup()
344 if ( ! self -> seen_first ) in SRA_ReadGetCategory()
402 if ( ! self -> seen_first ) in SRA_ReadGetSequence()
476 if ( ! self -> seen_first ) in SRA_ReadGetQualities()
503 if ( ! self -> seen_first ) in SRA_ReadNumFragments()
526 if ( ! self -> seen_first ) in SRA_ReadFragIsAligned()
698 if ( self -> seen_first ) in SRA_ReadIteratorNext()
704 self -> seen_first = true; in SRA_ReadIteratorNext()
[all …]
|
| H A D | CSRA1_Read.c | 337 ref -> seen_first = true; in CSRA1_ReadMake()
360 if ( ! self -> seen_first ) in CSRA1_FragmentIsAligned()
413 if ( ! self -> seen_first ) in CSRA1_ReadFragIsAligned()
497 if ( self -> seen_first ) in CSRA1_ReadIteratorNext()
503 self -> seen_first = true; in CSRA1_ReadIteratorNext()
|
| H A D | CSRA1_PileupEvent.c | 61 if ( ! self -> seen_first ) in CSRA1_PileupEventStateTest()
876 if ( ! self -> seen_first ) in CSRA1_PileupEventIteratorNext()
877 self -> seen_first = true; in CSRA1_PileupEventIteratorNext()
912 self -> seen_first = false; in CSRA1_PileupEventIteratorReset()
|
| H A D | SRA_Read.h | 97 bool seen_first; member
|
| H A D | CSRA1_ReferenceWindow.c | 112 bool seen_first; member
162 if ( self -> seen_first && in GetAlignment()
927 if ( ! self -> seen_first ) in CSRA1_ReferenceWindowIteratorNext()
929 self -> seen_first = true; in CSRA1_ReferenceWindowIteratorNext()
|
| H A D | CSRA1_Pileup.h | 172 bool seen_first; member
|
| /dports/security/pkcs11-tools/pkcs11-tools-2.5.0/.gnulib/tests/ |
| H A D | test-bitset.c | 180 bool seen_first = false; in compare() local
187 seen_first = true; in compare()
193 ASSERT (!seen_first); in compare()
198 ASSERT (seen_first); in compare()
209 bool seen_first = false; in compare() local
216 seen_first = true; in compare()
222 ASSERT (!seen_first); in compare()
227 ASSERT (seen_first); in compare()
|
| /dports/net-mgmt/ipcad/ipcad-3.7.3/ |
| H A D | storage.h | 66 double seen_first; /* First packet in the flow */ member
|
| H A D | nflow.c | 133 && (now - el->flow.seen_first) < conf->netflow_timeout_active in process_netflow_cache()
218 nfr->First = (el->flow.seen_first - self_started) * 1000; in flow_export()
|
| H A D | storage.c | 112 el->flow.seen_first = get_now(); in flow_update()
113 el->flow.seen_last = el->flow.seen_first; in flow_update()
|
| /dports/x11/guake/Guake-3.4.0/guake/ |
| H A D | prefs.py | 1032 seen_first = False # first item "always on primary" is special
1034 if seen_first:
1039 seen_first = True
|
| /dports/textproc/mdbook/mdBook-0.4.13/cargo-crates/pulldown-cmark-0.7.2/src/ |
| H A D | parse.rs | 1800 seen_first: bool, field
1807 seen_first: false, in new()
1812 if self.seen_first { in insert()
1820 self.seen_first = true; in insert()
1839 self.seen_first = false; in clear()
|
| /dports/textproc/mdbook-linkcheck/mdbook-linkcheck-0.7.6/cargo-crates/pulldown-cmark-0.7.2/src/ |
| H A D | parse.rs | 1800 seen_first: bool, field
1807 seen_first: false, in new()
1812 if self.seen_first { in insert()
1820 self.seen_first = true; in insert()
1839 self.seen_first = false; in clear()
|