| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/objtools/import/ftable/ |
| H A D | gff3_line_reader.cpp | 104 TSeqPos seqStart, seqStop; in xInitializeRecord() local
106 xInitializeLocation(columns, seqId, seqStart, seqStop, seqStrand); in xInitializeRecord()
130 record.Initialize(seqId, source, featType, seqStart, seqStop, in xInitializeRecord()
175 TSeqPos& seqStop, in xInitializeLocation() argument
198 seqStop = NStr::StringToInt(columns[4])-1; in xInitializeLocation()
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| H A D | gtf_import_data.cpp | 86 TSeqPos seqStop, in Initialize() argument
95 CSeq_interval(*pId, seqStart, seqStop, seqStrand)); in Initialize()
115 auto seqStop = mLocation.GetInt().GetTo(); in Serialize() local
125 out << " SeqStop = " << seqStop << "\n"; in Serialize()
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| H A D | gtf_line_reader.cpp | 137 TSeqPos seqStart, seqStop; in xInitializeRecord() local
139 xInitializeLocation(columns, seqId, seqStart, seqStop, seqStrand); in xInitializeRecord()
164 record.Initialize(seqId, source, featType, seqStart, seqStop, in xInitializeRecord()
267 TSeqPos& seqStop, in xInitializeLocation() argument
290 seqStop = NStr::StringToInt(columns[4])-1; in xInitializeLocation()
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| H A D | gff3_import_data.cpp | 77 TSeqPos seqStop, in Initialize() argument
90 CSeq_interval(*pId, seqStart, seqStop, seqStrand)); in Initialize()
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| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/include/objtools/readers/ |
| H A D | gff_base_columns.hpp | 123 TSeqPos seqStop) { in SetExtent() argument
125 m_uSeqStop = seqStop; in SetExtent()
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| /dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/include/objtools/readers/ |
| H A D | gff_base_columns.hpp | 123 TSeqPos seqStop) { in SetExtent() argument
125 m_uSeqStop = seqStop; in SetExtent()
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| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/objtools/writers/ |
| H A D | gff3flybase_writer.cpp | 211 const unsigned int seqStop = exon.GetProduct_end().AsSeqPos()/tgtWidth; in xAssignAlignmentSplicedLocation() local
219 record.SetLocation(seqStart, seqStop, seqStrand); in xAssignAlignmentSplicedLocation()
260 string seqStop = NStr::IntToString(exon.GetGenomic_end()+1); in xAssignAlignmentSplicedTarget() local
269 target += " " + seqStop; in xAssignAlignmentSplicedTarget()
438 unsigned int seqStop = alnMap.GetSeqStop(0); in xAssignAlignmentDensegLocation() local
442 record.SetLocation(seqStart, seqStop, seqStrand); in xAssignAlignmentDensegLocation()
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| H A D | gff3_writer.cpp | 563 unsigned int seqStop = exon.GetGenomic_end(); in xAssignAlignmentSplicedLocation() local
687 target += " " + seqStop; in xAssignAlignmentSplicedTarget()
1673 unsigned int seqStop(0); in xAssignFeatureEndpoints() local
1677 seqStart, seqStop)) { in xAssignFeatureEndpoints()
1680 baseRecord.SetLocation(seqStart, seqStop); in xAssignFeatureEndpoints()
1721 if (seqStop < bstop) { in xAssignFeatureEndpoints()
1722 seqStop += bsh.GetInst().GetLength(); in xAssignFeatureEndpoints()
1731 if (seqStop < bstart) { in xAssignFeatureEndpoints()
1732 seqStop += bsh.GetInst().GetLength(); in xAssignFeatureEndpoints()
1734 baseRecord.SetLocation(seqStart, seqStop); in xAssignFeatureEndpoints()
[all …]
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| H A D | gff_feature_record.cpp | 97 unsigned int seqStop = Location().GetStop(eExtreme_Positional); in SetLocation() local
99 string max = NStr::IntToString(seqStop + 1); in SetLocation()
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| H A D | gff3_idgen.cpp | 149 string seqStop = NStr::NumericToString(bsh.GetBioseqLength()); in GetGffSourceId() local
154 locationId += seqStop; in GetGffSourceId()
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| H A D | gff_base_record.cpp | 226 unsigned int seqStop, in SetLocation() argument
231 mSeqStop = seqStop; in SetLocation()
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| /dports/games/d2x/d2x-0.2.5/unused/win95/ |
| H A D | midiseq.h | 111 MMRESULT FNLOCAL seqStop(
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| H A D | winmidi.c | 191 mmrc = seqStop(&MSeq); in wmidi_init_song()
252 if (seqStop(&MSeq) != MMSYSERR_NOERROR) return 0; in wmidi_stop()
768 MMRESULT FNLOCAL seqStop( in seqStop() function
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| /dports/biology/mmseqs2/MMseqs2-13-45111/src/commons/ |
| H A D | tantan.cpp | 287 const char *seqStop = seqFurthestBack(); in calcEmissionProbs() local
291 while (offsetPtr > seqStop) { in calcEmissionProbs()
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| /dports/audio/muse-sequencer/muse-4.0.0/src/muse/ |
| H A D | app.h | 455 void seqStop();
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| H A D | app.cpp | 282 void MusE::seqStop() in seqStop() function in MusEGui::MusE
310 seqStop(); in seqRestart()
1397 seqStop(); in loadProjectFile()
1918 seqStop(); in closeEvent()
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| H A D | song.cpp | 2523 MusEGlobal::muse->seqStop(); in seqSignal()
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| /dports/audio/bristol/bristol-0.60.10/brighton/ |
| H A D | brightonCLI.c | 600 seqStop(guimain *global) in seqStop() function
4109 seqStop(global); in brightonCLIcheck()
4187 seqStop(global); in brightonCLIcheck()
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