Searched refs:seq_strand (Results 1 – 6 of 6) sorted by relevance
/dports/devel/p5-Data-Stag/Data-Stag-0.14/t/ |
H A D | bio.x | 23 [seq_strand=>+1], 31 [seq_strand=>+1], 39 [seq_strand=>+1], 46 [seq_strand=>+1], 169 [seq_strand=>+1], 179 [seq_strand=>+1], 185 [seq_strand=>+1], 191 [seq_strand=>+1], 202 [seq_strand=>+1], 208 [seq_strand=>+1], [all …]
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/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/algo/gnomon/ |
H A D | gnomon_seq.cpp | 171 bool Partial5pCodonIsStop(const CEResidueVec& seq_strand, int start, int frame) { in Partial5pCodonIsStop() argument 176 if(codon_start >= 0 && IsStopCodon(&seq_strand[codon_start])) in Partial5pCodonIsStop()
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/dports/biology/p5-BioPerl/BioPerl-1.7.7/lib/Bio/SearchIO/ |
H A D | infernal.pm | 423 $seq_start, $seq_stop, $seq_strand, $seq_cov,
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/dports/biology/ncbi-toolkit/ncbi/api/ |
H A D | salsap.c | 1704 Uint1 seq_strand; in LocalAlignToSeqAnnotDimn() local 1870 seq_strand = Seq_strand_unknown; in LocalAlignToSeqAnnotDimn() 1872 seq_strand = strandp[k]; in LocalAlignToSeqAnnotDimn() 1873 if (seq_strand==Seq_strand_minus) { in LocalAlignToSeqAnnotDimn()
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/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/objtools/align_format/ |
H A D | showalign.cpp | 720 ENa_strand seq_strand, in s_FillCdsStartPosition() argument 772 if(seq_strand == eNa_strand_plus){ in s_FillCdsStartPosition()
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/dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/src/objtools/align_format/ |
H A D | showalign.cpp | 720 ENa_strand seq_strand, in s_FillCdsStartPosition() argument 772 if(seq_strand == eNa_strand_plus){ in s_FillCdsStartPosition()
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