| /dports/biology/hhsuite/hh-suite-3.3.0/scripts/ |
| H A D | pdb2fasta.pl | 78 my $seqres; #
194 @seqres=();
423 @seqres=();
442 $seqres =~ s/\s*$//;
446 if (scalar(@seqres)!=$length) {
450 @seqres=();
452 push(@seqres,split(/\s+/,$seqres));
585 my $seqres="";
589 foreach my $aa (@seqres) {$seqres.=&Three2OneLetter($aa);}
603 $nc=$nchains{$seqres};
[all …]
|
| /dports/biology/emboss/EMBOSS-6.6.0/ajax/core/ |
| H A D | ajpdbio.c | 345 AjPStr *seqres; member
2149 if ((*Ppdbfile)->seqres) in pdbioPdbfileDel()
2154 AJFREE((*Ppdbfile)->seqres); in pdbioPdbfileDel()
2388 AJCNEW0(pdbfile->seqres, nchains); in pdbioPdbfileNew()
2569 seqres = ajStrNew(); in pdbioFirstPass()
2666 ajStrAppendK(&seqres, ' '); in pdbioFirstPass()
3122 ajStrDel(&seqres); in pdbioFirstPass()
3136 ajStrDel(&seqres); in pdbioFirstPass()
3161 ajStrDel(&seqres); in pdbioFirstPass()
3196 if (!seqres || !seq) in pdbioSeqresToSequence()
[all …]
|
| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/objects/seqedit/ |
| H A D | seqedit.module | 2 …set/seqset objects/seq/seq objects/seqalign/seqalign objects/seqfeat/seqfeat objects/seqres/seqres
|
| /dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/src/objects/seqedit/ |
| H A D | seqedit.module | 2 …set/seqset objects/seq/seq objects/seqalign/seqalign objects/seqfeat/seqfeat objects/seqres/seqres
|
| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/objects/seq/ |
| H A D | seq.module | 2 …ck/seqblock objects/seqalign/seqalign objects/seqfeat/seqfeat objects/seqres/seqres objects/seqtab…
|
| /dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/src/objects/seq/ |
| H A D | seq.module | 2 …ck/seqblock objects/seqalign/seqalign objects/seqfeat/seqfeat objects/seqres/seqres objects/seqtab…
|
| /dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/src/objtools/cleanup/ |
| H A D | autogenerated_extended_cleanup.sh | 3 …cts/pub/pub.asn -m ../../objects/biblio/biblio.asn -m ../../objects/seqres/seqres.asn -m ../../o…
|
| H A D | autogenerated_cleanup.sh | 3 …cts/pub/pub.asn -m ../../objects/biblio/biblio.asn -m ../../objects/seqres/seqres.asn -m ../../o…
|
| /dports/java/openjdk11/jdk11u-jdk-11.0.13-8-1/src/java.desktop/share/classes/com/sun/media/sound/ |
| H A D | SoftMidiAudioFileReader.java | 79 int seqres = seq.getResolution(); in getAudioInputStream() local
101 curtime += ((tick - lasttick) * mpq) / seqres; in getAudioInputStream()
103 curtime = (long) ((tick * 1000000.0 * divtype) / seqres); in getAudioInputStream()
|
| /dports/java/openjdk13/jdk13u-jdk-13.0.10-1-1/src/java.desktop/share/classes/com/sun/media/sound/ |
| H A D | SoftMidiAudioFileReader.java | 79 int seqres = seq.getResolution(); in getAudioInputStream() local
101 curtime += ((tick - lasttick) * mpq) / seqres; in getAudioInputStream()
103 curtime = (long) ((tick * 1000000.0 * divtype) / seqres); in getAudioInputStream()
|
| /dports/java/openjdk11-jre/jdk11u-jdk-11.0.13-8-1/src/java.desktop/share/classes/com/sun/media/sound/ |
| H A D | SoftMidiAudioFileReader.java | 79 int seqres = seq.getResolution(); in getAudioInputStream() local
101 curtime += ((tick - lasttick) * mpq) / seqres; in getAudioInputStream()
103 curtime = (long) ((tick * 1000000.0 * divtype) / seqres); in getAudioInputStream()
|
| /dports/java/openjdk12/openjdk-jdk12u-jdk-12.0.2-10-4/src/java.desktop/share/classes/com/sun/media/sound/ |
| H A D | SoftMidiAudioFileReader.java | 79 int seqres = seq.getResolution(); in getAudioInputStream() local
101 curtime += ((tick - lasttick) * mpq) / seqres; in getAudioInputStream()
103 curtime = (long) ((tick * 1000000.0 * divtype) / seqres); in getAudioInputStream()
|
| /dports/java/openjdk16/jdk16u-jdk-16.0.2-7-1/src/java.desktop/share/classes/com/sun/media/sound/ |
| H A D | SoftMidiAudioFileReader.java | 79 int seqres = seq.getResolution(); in getAudioInputStream() local
101 curtime += ((tick - lasttick) * mpq) / seqres; in getAudioInputStream()
103 curtime = (long) ((tick * 1000000.0 * divtype) / seqres); in getAudioInputStream()
|
| /dports/java/openjdk17/jdk17u-jdk-17.0.1-12-1/src/java.desktop/share/classes/com/sun/media/sound/ |
| H A D | SoftMidiAudioFileReader.java | 79 int seqres = seq.getResolution(); in getAudioInputStream() local
101 curtime += ((tick - lasttick) * mpq) / seqres; in getAudioInputStream()
103 curtime = (long) ((tick * 1000000.0 * divtype) / seqres); in getAudioInputStream()
|
| /dports/java/openjdk15/jdk15u-jdk-15.0.6-1-1/src/java.desktop/share/classes/com/sun/media/sound/ |
| H A D | SoftMidiAudioFileReader.java | 79 int seqres = seq.getResolution(); in getAudioInputStream() local
101 curtime += ((tick - lasttick) * mpq) / seqres; in getAudioInputStream()
103 curtime = (long) ((tick * 1000000.0 * divtype) / seqres); in getAudioInputStream()
|
| /dports/java/openjdk14/jdk14u-jdk-14.0.2-12-1/src/java.desktop/share/classes/com/sun/media/sound/ |
| H A D | SoftMidiAudioFileReader.java | 79 int seqres = seq.getResolution(); in getAudioInputStream() local
101 curtime += ((tick - lasttick) * mpq) / seqres; in getAudioInputStream()
103 curtime = (long) ((tick * 1000000.0 * divtype) / seqres); in getAudioInputStream()
|
| /dports/audio/gervill/gervill/src.demos/ |
| H A D | Midi2WavRender.java | 150 int seqres = seq.getResolution(); in send() local
173 curtime += ((tick - lasttick) * mpq) / seqres; in send()
175 curtime = (long) ((tick * 1000000.0 * divtype) / seqres); in send()
|
| /dports/audio/gervill/gervill/src/com/sun/media/sound/ |
| H A D | SoftMidiAudioFileReader.java | 81 int seqres = seq.getResolution(); in getAudioInputStream() local
103 curtime += ((tick - lasttick) * mpq) / seqres; in getAudioInputStream()
105 curtime = (long) ((tick * 1000000.0 * divtype) / seqres); in getAudioInputStream()
|
| /dports/java/openjdk11/jdk11u-jdk-11.0.13-8-1/test/jdk/javax/sound/midi/Gervill/SoftSynthesizer/ |
| H A D | TestRender1.java | 52 int seqres = seq.getResolution(); in send() local
75 curtime += ((tick - lasttick) * mpq) / seqres; in send()
77 curtime = (long) ((tick * 1000000.0 * divtype) / seqres); in send()
|
| /dports/java/openjdk13/jdk13u-jdk-13.0.10-1-1/test/jdk/javax/sound/midi/Gervill/SoftSynthesizer/ |
| H A D | TestRender1.java | 52 int seqres = seq.getResolution(); in send() local
75 curtime += ((tick - lasttick) * mpq) / seqres; in send()
77 curtime = (long) ((tick * 1000000.0 * divtype) / seqres); in send()
|
| /dports/audio/gervill/gervill/test/com/sun/media/sound/SoftSynthesizer/ |
| H A D | TestRender1.java | 52 int seqres = seq.getResolution(); in send() local
75 curtime += ((tick - lasttick) * mpq) / seqres; in send()
77 curtime = (long) ((tick * 1000000.0 * divtype) / seqres); in send()
|
| /dports/java/openjdk8/jdk8u-jdk8u312-b07.1/jdk/src/share/classes/com/sun/media/sound/ |
| H A D | SoftMidiAudioFileReader.java | 82 int seqres = seq.getResolution(); in getAudioInputStream() local
104 curtime += ((tick - lasttick) * mpq) / seqres; in getAudioInputStream()
106 curtime = (long) ((tick * 1000000.0 * divtype) / seqres); in getAudioInputStream()
|
| /dports/java/openjdk11-jre/jdk11u-jdk-11.0.13-8-1/test/jdk/javax/sound/midi/Gervill/SoftSynthesizer/ |
| H A D | TestRender1.java | 52 int seqres = seq.getResolution(); in send() local
75 curtime += ((tick - lasttick) * mpq) / seqres; in send()
77 curtime = (long) ((tick * 1000000.0 * divtype) / seqres); in send()
|
| /dports/java/openjdk12/openjdk-jdk12u-jdk-12.0.2-10-4/test/jdk/javax/sound/midi/Gervill/SoftSynthesizer/ |
| H A D | TestRender1.java | 52 int seqres = seq.getResolution(); in send() local
75 curtime += ((tick - lasttick) * mpq) / seqres; in send()
77 curtime = (long) ((tick * 1000000.0 * divtype) / seqres); in send()
|
| /dports/java/openjdk15/jdk15u-jdk-15.0.6-1-1/test/jdk/javax/sound/midi/Gervill/SoftSynthesizer/ |
| H A D | TestRender1.java | 52 int seqres = seq.getResolution(); in send() local
75 curtime += ((tick - lasttick) * mpq) / seqres; in send()
77 curtime = (long) ((tick * 1000000.0 * divtype) / seqres); in send()
|