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Searched refs:sequenceInput (Results 1 – 4 of 4) sorted by relevance

/dports/biology/clustalw/clustalw-2.1/src/
H A DClustal.h40 int sequenceInput(bool append, string *offendingSeq);
H A DClustal.cpp973 int Clustal::sequenceInput(bool append, string *offendingSeq) in sequenceInput() function in clustalw::Clustal
/dports/science/ghmm/ghmm-0.9-rc3/ghmmwrapper/
H A Dghmm.py679 if isinstance(sequenceInput, str) or isinstance(sequenceInput, unicode):
681 if not os.path.exists(sequenceInput):
682 raise IOError('File ' + str(sequenceInput) + ' not found.')
684 tmp = self.seq_read(sequenceInput)
696 elif isinstance(sequenceInput, list):
697 internalInput = self.emissionDomain.internalSequence(sequenceInput)
714 …elif isinstance(sequenceInput, ghmmwrapper.ghmm_dseq) or isinstance(sequenceInput, ghmmwrapper.ghm…
715 if sequenceInput.seq_number > 1:
717 self.cseq = sequenceInput
4558 for sequenceInput in sequenceInputs:
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/dports/biology/clustalw/clustalw-2.1/src/interface/
H A DInteractiveMenu.cpp114 clustalObj->sequenceInput(false, &offendingSeq); in mainMenu()
589 clustalObj->sequenceInput(false, &offendingSeq); in phylogeneticTreeMenu()