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Searched refs:sequenceP (Results 1 – 25 of 30) sorted by relevance

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/dports/biology/garlic/garlic-1.6/
H A Dsequence.c66 char *sequenceP; in Sequence_() local
79 sequenceP = P + 1; in Sequence_()
82 P = sequenceP; in Sequence_()
86 n = ParseSequence_ (runtimeSP, sequenceP); in Sequence_()
H A Dparse_sequence.c67 *(runtimeSP->sequenceP + i) = '\0'; in ParseSequence_()
86 P = runtimeSP->sequenceP + max_length * residueI; in ParseSequence_()
H A Dfree_runtime.c42 if (runtimeSP->sequenceP) free (runtimeSP->sequenceP); in FreeRuntime_()
H A Dload_sequence.c82 *(runtimeSP->sequenceP + i) = '\0'; in LoadSequence_()
171 P = runtimeSP->sequenceP + offset; in LoadSequence_()
H A Dplot_mouse.c105 residue_nameP = runtimeSP->sequenceP + central_residueI * residue_name_length; in PlotMouse_()
169 residue_nameP = runtimeSP->sequenceP + residueI * residue_name_length; in PlotMouse_()
H A Dcopy_sequence.c64 sourceP = runtimeSP->sequenceP + residueI * max_length; in CopySequence_()
H A Drequired_atoms.c58 curr_residue_nameP = runtimeSP->sequenceP + residueI * max_length; in CountRequiredAtoms_()
H A Dinit_hyphob.c62 residue_nameP = runtimeSP->sequenceP + residueI * max_length; in InitHyphob_()
H A Dhyphob_function1.c94 residue_nameP = runtimeSP->sequenceP + combinedI * max_length; in HyphobFunction1_()
H A Dhyphob_function4.c95 residue_nameP = runtimeSP->sequenceP + combinedI * max_length; in HyphobFunction4_()
H A Dhyphob_function2.c95 residue_nameP = runtimeSP->sequenceP + combinedI * max_length; in HyphobFunction2_()
H A Dhyphob_function3.c95 residue_nameP = runtimeSP->sequenceP + combinedI * max_length; in HyphobFunction3_()
H A Dsave_sequence.c87 nameP = runtimeSP->sequenceP + residueI * max_length; in SaveSequence_()
H A Dsave_seq_w_numbers.c90 nameP = runtimeSP->sequenceP + residueI * max_length; in SaveSequenceWithNumbers_()
H A Dreplace.c276 new_residue_nameP = runtimeSP->sequenceP + residueI * max_length; in Replace_()
341 new_residue_nameP = runtimeSP->sequenceP + in Replace_()
405 new_residue_nameP = runtimeSP->sequenceP + residueI * max_length; in Replace_()
504 new_residue_nameP = runtimeSP->sequenceP + residueI * max_length; in Replace_()
H A Dhyphob_function5.c120 residue_nameP = runtimeSP->sequenceP + residueI * max_length; in HyphobFunction5_()
H A Dinit_runtime.c166 runtimeSP->sequenceP = (char *) calloc (elementsN, char_size); in InitRuntime_()
167 if (runtimeSP->sequenceP == NULL) in InitRuntime_()
H A Dselect_sequence.c88 first_name2P = runtimeSP->sequenceP; in SelectSequence_()
H A Dalpha_membrane.c181 destP = runtimeSP->sequenceP + offset; in AlphaMembrane_()
197 residue_nameP = runtimeSP->sequenceP + residueI * max_length; in AlphaMembrane_()
H A Dcreate.c138 curr_residue_nameP = runtimeSP->sequenceP + residueI * max_length; in Create_()
H A Dsequence_from.c164 destP = runtimeSP->sequenceP + offset; in SequenceFrom_()
H A Dread_fasta.c138 P = runtimeSP->sequenceP + offset; in ReadFasta_()
H A Dhyphob_function6.c120 residue_nameP = runtimeSP->sequenceP + residueI * max_length; in HyphobFunction6_()
H A Dcomparison_mouse.c230 nameP = runtimeSP->sequenceP + residueI * name_length; in ComparisonMouse_()
H A Dcreate_structure.c183 curr_residue_nameP = runtimeSP->sequenceP + residueI * max_length; in CreateStructure_()

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