Searched refs:seqvnp (Results 1 – 4 of 4) sorted by relevance
/dports/biology/ncbi-toolkit/ncbi/desktop/ |
H A D | salfiles.c | 102 ValNodePtr seqvnp = NULL; in new_sequence_vectors() local 114 return seqvnp; in new_sequence_vectors() 1113 ValNodePtr vnp, seqvnp; in SequenceMacawRead() local 1161 vnp = seqvnp; in SequenceMacawRead() 1199 return seqvnp; in SequenceMacawRead() 1278 if (seqvnp == NULL) in MacawRead() 1287 ValNodeFree (seqvnp); in MacawRead() 1654 vnp = seqvnp; in ReadLocalAlign() 1737 return seqvnp; in ReadLocalAlign() 1793 if (seqvnp == NULL) in ReadAlignmentFunc() [all …]
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/dports/biology/ncbi-toolkit/ncbi/api/ |
H A D | salsap.h | 90 NLM_EXTERN SeqAnnotPtr LIBCALL LocalAlignToSeqAnnotDimn (ValNodePtr seqvnp, SeqIdPtr seqsip,
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H A D | salsap.c | 1691 NLM_EXTERN SeqAnnotPtr LIBCALL LocalAlignToSeqAnnotDimn (ValNodePtr seqvnp, SeqIdPtr seqsip, ValNod… in LocalAlignToSeqAnnotDimn() argument 1711 for (k =0, vnp =seqvnp; k < nbseq && vnp !=NULL; k++, vnp =vnp->next) in LocalAlignToSeqAnnotDimn() 1729 for (k =0, vnp =seqvnp; k < nbseq && vnp !=NULL; k++, vnp =vnp->next) in LocalAlignToSeqAnnotDimn() 1738 for (k =0, vnp =seqvnp; k <nbseq && vnp !=NULL; k++, vnp =vnp->next) in LocalAlignToSeqAnnotDimn() 1788 for (k =0, vnp =seqvnp; k < nbseq && vnp !=NULL; k++, vnp =vnp->next) in LocalAlignToSeqAnnotDimn() 1798 for (k =0, vnp =seqvnp; k <nbseq && vnp !=NULL; k++, vnp =vnp->next) in LocalAlignToSeqAnnotDimn() 1840 for (k =0, vnp =seqvnp; k <nbseq && vnp !=NULL; k++, vnp =vnp->next) in LocalAlignToSeqAnnotDimn() 1854 for (k =0, vnp =seqvnp; k <nbseq && vnp !=NULL; k++, vnp =vnp->next) in LocalAlignToSeqAnnotDimn() 1905 for (k=0, vnp=seqvnp; k <nbseq && vnp!=NULL; k++, vnp=vnp->next) { in LocalAlignToSeqAnnotDimn()
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H A D | sqnutil3.c | 4792 ValNodePtr PNTR seqvnp; in MakeSequinDataFromAlignmentEx() local 4812 seqvnp = (ValNodePtr PNTR) MemNew (afp->num_segments * sizeof (ValNodePtr)); in MakeSequinDataFromAlignmentEx() 4815 if (sip_list == NULL || sip_prev == NULL || seqvnp == NULL in MakeSequinDataFromAlignmentEx() 4820 MemFree (seqvnp); in MakeSequinDataFromAlignmentEx() 4830 seqvnp [curr_seg] = NULL; in MakeSequinDataFromAlignmentEx() 4887 vnp = ValNodeNew (seqvnp[curr_seg]); in MakeSequinDataFromAlignmentEx() 4888 if (seqvnp[curr_seg] == NULL) seqvnp[curr_seg] = vnp; in MakeSequinDataFromAlignmentEx() 4934 ValNodeFree (seqvnp [curr_seg]); in MakeSequinDataFromAlignmentEx() 4936 MemFree (seqvnp); in MakeSequinDataFromAlignmentEx() 4975 ValNodeFree (seqvnp [curr_seg]); in MakeSequinDataFromAlignmentEx() [all …]
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