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Searched refs:seqvnp (Results 1 – 4 of 4) sorted by relevance

/dports/biology/ncbi-toolkit/ncbi/desktop/
H A Dsalfiles.c102 ValNodePtr seqvnp = NULL; in new_sequence_vectors() local
114 return seqvnp; in new_sequence_vectors()
1113 ValNodePtr vnp, seqvnp; in SequenceMacawRead() local
1161 vnp = seqvnp; in SequenceMacawRead()
1199 return seqvnp; in SequenceMacawRead()
1278 if (seqvnp == NULL) in MacawRead()
1287 ValNodeFree (seqvnp); in MacawRead()
1654 vnp = seqvnp; in ReadLocalAlign()
1737 return seqvnp; in ReadLocalAlign()
1793 if (seqvnp == NULL) in ReadAlignmentFunc()
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/dports/biology/ncbi-toolkit/ncbi/api/
H A Dsalsap.h90 NLM_EXTERN SeqAnnotPtr LIBCALL LocalAlignToSeqAnnotDimn (ValNodePtr seqvnp, SeqIdPtr seqsip,
H A Dsalsap.c1691 NLM_EXTERN SeqAnnotPtr LIBCALL LocalAlignToSeqAnnotDimn (ValNodePtr seqvnp, SeqIdPtr seqsip, ValNod… in LocalAlignToSeqAnnotDimn() argument
1711 for (k =0, vnp =seqvnp; k < nbseq && vnp !=NULL; k++, vnp =vnp->next) in LocalAlignToSeqAnnotDimn()
1729 for (k =0, vnp =seqvnp; k < nbseq && vnp !=NULL; k++, vnp =vnp->next) in LocalAlignToSeqAnnotDimn()
1738 for (k =0, vnp =seqvnp; k <nbseq && vnp !=NULL; k++, vnp =vnp->next) in LocalAlignToSeqAnnotDimn()
1788 for (k =0, vnp =seqvnp; k < nbseq && vnp !=NULL; k++, vnp =vnp->next) in LocalAlignToSeqAnnotDimn()
1798 for (k =0, vnp =seqvnp; k <nbseq && vnp !=NULL; k++, vnp =vnp->next) in LocalAlignToSeqAnnotDimn()
1840 for (k =0, vnp =seqvnp; k <nbseq && vnp !=NULL; k++, vnp =vnp->next) in LocalAlignToSeqAnnotDimn()
1854 for (k =0, vnp =seqvnp; k <nbseq && vnp !=NULL; k++, vnp =vnp->next) in LocalAlignToSeqAnnotDimn()
1905 for (k=0, vnp=seqvnp; k <nbseq && vnp!=NULL; k++, vnp=vnp->next) { in LocalAlignToSeqAnnotDimn()
H A Dsqnutil3.c4792 ValNodePtr PNTR seqvnp; in MakeSequinDataFromAlignmentEx() local
4812 seqvnp = (ValNodePtr PNTR) MemNew (afp->num_segments * sizeof (ValNodePtr)); in MakeSequinDataFromAlignmentEx()
4815 if (sip_list == NULL || sip_prev == NULL || seqvnp == NULL in MakeSequinDataFromAlignmentEx()
4820 MemFree (seqvnp); in MakeSequinDataFromAlignmentEx()
4830 seqvnp [curr_seg] = NULL; in MakeSequinDataFromAlignmentEx()
4887 vnp = ValNodeNew (seqvnp[curr_seg]); in MakeSequinDataFromAlignmentEx()
4888 if (seqvnp[curr_seg] == NULL) seqvnp[curr_seg] = vnp; in MakeSequinDataFromAlignmentEx()
4934 ValNodeFree (seqvnp [curr_seg]); in MakeSequinDataFromAlignmentEx()
4936 MemFree (seqvnp); in MakeSequinDataFromAlignmentEx()
4975 ValNodeFree (seqvnp [curr_seg]); in MakeSequinDataFromAlignmentEx()
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