Searched refs:setListFile (Results 1 – 25 of 47) sorted by relevance
12
108 else { current->setListFile(listfile); } in BinSeqCommand()174 current->setListFile(listfile); in BinSeqCommand()
67 else { format = "list"; inputfile = listfile; current->setListFile(listfile); } in GetlabelCommand()
129 if (listfile != "") { current->setListFile(listfile); } in SetCurrentCommand()294 current->setListFile(""); in execute()405 current->setListFile(util.getFullPathName(pieces[1])); in readCurrentFiles()
95 else { current->setListFile(listfile); } in GetListCountCommand()
114 current->setListFile(""); in execute()
141 else { current->setListFile(listfile); } in GetLineageCommand()289 …if ((itTypes->second).size() != 0) { currentName = (itTypes->second)[0]; current->setListFile(curr… in execute()
120 else { current->setListFile(listfile); } in GetOtusCommand()173 …es->second).size() != 0) { currentName = (itTypes->second)[0]; current->setListFile(currentName); } in execute()
86 else { format = "list"; inputfile = listfile; current->setListFile(listfile); } in GetSAbundCommand()
144 else { current->setListFile(listfile); } in RemoveLineageCommand()294 …es->second).size() != 0) { currentName = (itTypes->second)[0]; current->setListFile(currentName); } in execute()
119 else { current->setListFile(listfile); } in RemoveOtusCommand()175 …es->second).size() != 0) { currentName = (itTypes->second)[0]; current->setListFile(currentName); } in execute()
90 else { format = "list"; inputfile = listfile; current->setListFile(listfile); } in GetRAbundCommand()
95 else { current->setListFile(listfile); } in MergeOTUsCommand()206 …es->second).size() != 0) { currentName = (itTypes->second)[0]; current->setListFile(currentName); } in execute()
97 else { inputFileName = listfile; format = "list"; current->setListFile(listfile); } in ListOtusCommand()
102 else { format = "list"; inputfile = listfile; current->setListFile(listfile); } in HeatMapCommand()
110 else { current->setListFile(listfile); } in RemoveRareCommand()235 …if ((itTypes->second).size() != 0) { currentName = (itTypes->second)[0]; current->setListFile(curr… in execute()
241 …s->second).size() != 0) { currentName = (itTypes->second)[0]; current->setListFile(currentName); }… in execute()
303 …if ((itTypes->second).size() != 0) { currentName = (itTypes->second)[0]; current->setListFile(curr… in execute()
108 else{ inputFile = listfile; current->setListFile(listfile); } in SplitAbundCommand()214 …if ((itTypes->second).size() != 0) { currentName = (itTypes->second)[0]; current->setListFile(curr… in execute()
103 else { current->setListFile(listFile); } in SensSpecCommand()
124 else { current->setListFile(listfiles[0]); } in ListSeqsCommand()
183 else { current->setListFile(listfile); } in RemoveSeqsCommand()299 …if ((itTypes->second).size() != 0) { currentName = (itTypes->second)[0]; current->setListFile(curr… in execute()
127 else { current->setListFile(listFile); } in OtuHierarchyCommand()
155 else { current->setListFile(listfile); } in RemoveGroupsCommand()378 …if ((itTypes->second).size() != 0) { currentName = (itTypes->second)[0]; current->setListFile(curr… in execute()
165 else { current->setListFile(listfile); } in RenameSeqsCommand()277 …es->second).size() != 0) { currentName = (itTypes->second)[0]; current->setListFile(currentName); } in execute()
133 function setListFile($file) {