/dports/biology/ugene/ugene-40.1/src/libs_3rdparty/samtools/src/samtools/ |
H A D | kaln.c | 127 #define set_M(MM, cur, p, sc) \ macro 263 set_M(s->M, q, last + i - 1, mat[seq1[i]]); /* this will change s->M ! */ in ka_global_core() 267 set_M(s->M, q, last + i - 1, mat[seq1[i]]); in ka_global_core() 282 set_M(s->M, q, last + i - 1, mat[seq1[i]]); /* this will change s->M ! */ in ka_global_core() 286 set_M(s->M, q, last + i - 1, mat[seq1[i]]); in ka_global_core() 301 set_M(s->M, q, last + i - 1, mat[seq1[i]]); in ka_global_core() 305 set_M(s->M, q, last + i - 1, mat[seq1[i]]); in ka_global_core() 316 set_M(s->M, q, last + i - 1, mat[seq1[i]]); in ka_global_core() 320 set_M(s->M, q, last + len1 - 1, mat[seq1[i]]); in ka_global_core() 330 set_M(s->M, q, last + i - 1, mat[seq1[i]]); in ka_global_core() [all …]
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/dports/biology/stringtie/stringtie-2.1.1/samtools-0.1.18/ |
H A D | kaln.c | 127 #define set_M(MM, cur, p, sc) \ macro 263 set_M(s->M, q, last + i - 1, mat[seq1[i]]); /* this will change s->M ! */ in ka_global_core() 267 set_M(s->M, q, last + i - 1, mat[seq1[i]]); in ka_global_core() 282 set_M(s->M, q, last + i - 1, mat[seq1[i]]); /* this will change s->M ! */ in ka_global_core() 286 set_M(s->M, q, last + i - 1, mat[seq1[i]]); in ka_global_core() 301 set_M(s->M, q, last + i - 1, mat[seq1[i]]); in ka_global_core() 305 set_M(s->M, q, last + i - 1, mat[seq1[i]]); in ka_global_core() 316 set_M(s->M, q, last + i - 1, mat[seq1[i]]); in ka_global_core() 320 set_M(s->M, q, last + len1 - 1, mat[seq1[i]]); in ka_global_core() 330 set_M(s->M, q, last + i - 1, mat[seq1[i]]); in ka_global_core() [all …]
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/dports/biology/seqan1/seqan-1.3.1/lib/samtools/ |
H A D | kaln.c | 127 #define set_M(MM, cur, p, sc) \ macro 263 set_M(s->M, q, last + i - 1, mat[seq1[i]]); /* this will change s->M ! */ in ka_global_core() 267 set_M(s->M, q, last + i - 1, mat[seq1[i]]); in ka_global_core() 282 set_M(s->M, q, last + i - 1, mat[seq1[i]]); /* this will change s->M ! */ in ka_global_core() 286 set_M(s->M, q, last + i - 1, mat[seq1[i]]); in ka_global_core() 301 set_M(s->M, q, last + i - 1, mat[seq1[i]]); in ka_global_core() 305 set_M(s->M, q, last + i - 1, mat[seq1[i]]); in ka_global_core() 316 set_M(s->M, q, last + i - 1, mat[seq1[i]]); in ka_global_core() 320 set_M(s->M, q, last + len1 - 1, mat[seq1[i]]); in ka_global_core() 330 set_M(s->M, q, last + i - 1, mat[seq1[i]]); in ka_global_core() [all …]
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/dports/biology/rainbow/rainbow_2.0.4/ |
H A D | stdaln.c | 240 #define set_M(MM, cur, p, sc) \ macro 390 set_M(s->M, q, last + i - 1, mat[seq1[i]]); /* this will change s->M ! */ in aln_global_core() 394 set_M(s->M, q, last + i - 1, mat[seq1[i]]); in aln_global_core() 409 set_M(s->M, q, last + i - 1, mat[seq1[i]]); /* this will change s->M ! */ in aln_global_core() 413 set_M(s->M, q, last + i - 1, mat[seq1[i]]); in aln_global_core() 428 set_M(s->M, q, last + i - 1, mat[seq1[i]]); in aln_global_core() 432 set_M(s->M, q, last + i - 1, mat[seq1[i]]); in aln_global_core() 443 set_M(s->M, q, last + i - 1, mat[seq1[i]]); in aln_global_core() 447 set_M(s->M, q, last + len1 - 1, mat[seq1[i]]); in aln_global_core() 457 set_M(s->M, q, last + i - 1, mat[seq1[i]]); in aln_global_core() [all …]
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H A D | tags | 745 set_M stdaln.c 240;" d file:
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/dports/devel/ppl/ppl-1.2/tests/Concrete_Expression/ |
H A D | digitalfilters1.cc | 99 set_M(Coefficient& M, int m) { in set_M() function 136 set_M(M, 144); in test01() 222 set_M(M, 144); in test02() 313 set_M(M, 136); in test03() 403 set_M(M, 128); in test04() 503 set_M(M, 144); in test05() 712 set_M(M, 144); in test06() 921 set_M(M, 144); in test07()
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/dports/astro/kstars/kstars-3.5.6/kstars/skyobjects/ |
H A D | kspluto.cpp | 68 set_M(M0.Degrees() + M1 * t); in findGeocentricPosition()
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H A D | ksasteroid.h | 211 void set_M(double newM) { M.setD(newM); } in set_M() function
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/dports/astro/wcslib/wcslib-7.7/C/ |
H A D | tab.h | 616 int set_M; member
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H A D | tab.c | 100 tab->set_M = 0; in tabini() 513 tab->set_M = 0; in tabfree() 846 if (tab->flag != TABSET || tab->set_M < M) { in tabset() 877 tab->set_M = M; in tabset()
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/dports/astro/py-astropy/astropy-5.0/astropy/wcs/include/wcslib/ |
H A D | tab.h | 616 int set_M; member
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/dports/astro/py-astropy/astropy-5.0/cextern/wcslib/C/ |
H A D | tab.h | 616 int set_M; member
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H A D | tab.c | 100 tab->set_M = 0; in tabini() 513 tab->set_M = 0; in tabfree() 846 if (tab->flag != TABSET || tab->set_M < M) { in tabset() 877 tab->set_M = M; in tabset()
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/dports/astro/siril/siril/subprojects/wcslib/ |
H A D | tab.h | 588 int set_M; member
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H A D | tab.c | 105 tab->set_M = 0; in tabini() 524 tab->set_M = 0; in tabfree() 791 if (tab->flag != TABSET || tab->set_M < M) { in tabset() 822 tab->set_M = M; in tabset()
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/dports/math/geogram/geogram-1.7.7/src/lib/geogram/numerics/ |
H A D | optimizer.h | 153 void set_M(index_t M) { in set_M() function
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/dports/math/ogdf/OGDF/include/ogdf/energybased/fmmm/new_multipole_method/ |
H A D | QuadTreeNodeNM.h | 74 void set_M(List<QuadTreeNodeNM*>& list) {M = list;} in set_M() function
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/dports/math/barvinok/barvinok-0.41.5/ |
H A D | verify.c | 38 static int set_M(void *opt, long val) in set_M() function 65 ISL_ARG_USER_LONG(struct verify_options, M, 'M', "max", set_M, INT_MIN, NULL) in ISL_ARGS_START()
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/dports/math/geogram/geogram-1.7.7/src/lib/exploragram/optimal_transport/ |
H A D | optimal_transport.cpp | 407 optimizer->set_M(m); in optimize() 506 optimizer->set_M(m); in optimize_level()
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H A D | VSDM.cpp | 175 optimizer_->set_M(m); in optimize()
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/dports/math/geogram/geogram-1.7.7/src/lib/geogram/voronoi/ |
H A D | CVT.cpp | 307 optimizer->set_M(m); in Newton_iterations()
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/dports/math/geogram/geogram-1.7.7/src/tests/test_HLBFGS/ |
H A D | main.cpp | 210 optimizer->set_M((unsigned int)M); in Optimize_by_HLBFGS()
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/dports/math/geogram/geogram-1.7.7/src/lib/exploragram/hexdom/ |
H A D | FF.cpp | 336 solver->set_M(3); in FF_smooth()
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/dports/math/ogdf/OGDF/src/ogdf/energybased/fmmm/ |
H A D | NewMultipoleMethod.cpp | 1767 act_node_ptr->set_M(M); in calculate_local_expansions_and_WSPRLS()
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/dports/science/siconos/siconos-4.4.0/wrap/utils/ |
H A D | xml_parser.py | 3051 def set_M(self, M): self.M = M member in FirstOrderNonLinearDSType 3191 def set_M(self, M): self.M = M member in FirstOrderLinearDSType 3325 def set_M(self, M): self.M = M member in FirstOrderLinearTIDSType 6558 def set_M(self, M): self.M = M member in RelayType
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